Clone Name | rbart08b05 |
---|---|
Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 42.7 bits (99), Expect = 5e-04 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 9/48 (18%) Frame = -2 Query: 460 YNYNMSSSCGLP----GATV-----CDDPDAHVSWDGIHLTEAPYRFI 344 YNYN CG+ G V CD+PD V WDG+H T+A +FI Sbjct: 310 YNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFI 357
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 36.6 bits (83), Expect = 0.039 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 11/64 (17%) Frame = -2 Query: 460 YNYNMSSSCG-----------LPGATVCDDPDAHVSWDGIHLTEAPYRFIANTWLKGPYA 314 YN+++++ CG + G+ C P V+WDG H TEA + + G ++ Sbjct: 312 YNFSVTAPCGDTVTADDGTKIVVGSCAC--PSVRVNWDGAHYTEAANEYFFDQISTGAFS 369 Query: 313 HPPL 302 PP+ Sbjct: 370 DPPV 373
>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)| (Endo-1,4-beta-glucanase) (Cellulase) (Fragment) Length = 224 Score = 36.2 bits (82), Expect = 0.051 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -2 Query: 406 DPDAHVSWDGIHLTEAPYRFIANTWLK 326 D + +SWDG+HL+E Y IAN W K Sbjct: 109 DRNTDISWDGLHLSEIGYTKIANIWYK 135
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = -2 Query: 436 CGLPGATVCDDPDAHVSWDGIHLTEAPYRFIANTWLKGPYAH 311 C + +C + +++ WDG+H T+ Y+ I +K Y H Sbjct: 490 CKKSTSKICPNTSSYLFWDGVHPTQRAYKTINKVLIK-EYLH 530
>Y2559_MYCTU (Q50739) Hypothetical protein Rv2559c/MT2636| Length = 452 Score = 29.6 bits (65), Expect = 4.8 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 7/43 (16%) Frame = +3 Query: 363 SVRWMPSQLTCASGSSHTVAPGSPHDELM-------L*LYGPP 470 +VR P+ L G H +APGSP L+ + LYGPP Sbjct: 32 AVRMRPASLDEVVGQDHLLAPGSPLRRLVEGSGVASVILYGPP 74
>CSP_PLAFA (P02893) Circumsporozoite protein precursor (CS)| Length = 412 Score = 29.3 bits (64), Expect = 6.3 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = +3 Query: 327 LSQVLAMKR*GASVRWMPSQLTCASGSSHTVAPGS---PHDEL 446 + Q L + S W P +TC +G + PGS P DEL Sbjct: 331 IEQYLKKIKNSISTEWSPCSVTCGNGIQVRIKPGSANKPKDEL 373
>GLGC_CLOCE (Q9L385) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 426 Score = 28.9 bits (63), Expect = 8.2 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%) Frame = +2 Query: 224 SLVMDHHVMCVNN--NESI---DHVVADDA--GEGWMRVGALEPGVGDEAVGRLGEVDAI 382 S++M + +C N N SI ++ + A GEG +PG+ D + +GE +I Sbjct: 328 SIIMSNSRVCKNAYINRSIISEQAIIGEKARLGEGPDVPNEYKPGIYDSGITVVGEKSSI 387 Query: 383 PADVRVG 403 PAD +G Sbjct: 388 PADPVIG 394
>YT41_CAEEL (Q11069) Hypothetical protein B0416.1 in chromosome X| Length = 1203 Score = 28.9 bits (63), Expect = 8.2 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = -2 Query: 430 LPGATVCDDPDAHVSWDGIHLTEAPYRFIANTWLK--GPYA-HPPLASVVRDDMVY*FVV 260 LP V ++P + S+ + T P T L GP+ + P ASV +DD V+ V Sbjct: 496 LPRYPVDNNPHTYYSYAPVTTTPIPATSSWTTVLPDFGPFGVYNPKASVTKDDTVFSSPV 555 Query: 259 INTH 248 + TH Sbjct: 556 VETH 559
>CSP_PLAFT (P13814) Circumsporozoite protein precursor (CS)| Length = 424 Score = 28.9 bits (63), Expect = 8.2 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = +3 Query: 327 LSQVLAMKR*GASVRWMPSQLTCASGSSHTVAPGS---PHDEL 446 + Q L + S W P +TC +G + PGS P DEL Sbjct: 343 IEQYLKKIQNSLSTEWSPCSVTCGNGIQVRIKPGSANKPKDEL 385
>OAR_MYXXA (P38370) Protein oar precursor| Length = 1061 Score = 28.9 bits (63), Expect = 8.2 Identities = 19/58 (32%), Positives = 24/58 (41%) Frame = -2 Query: 457 NYNMSSSCGLPGATVCDDPDAHVSWDGIHLTEAPYRFIANTWLKGPYAHPPLASVVRD 284 N N + G G T D PD + A Y +ANT L Y H + SV+ D Sbjct: 741 NVNRFYTGGTVGGTPVD-PDIKAQSSDEIVVGAEYEVLANTRLGASYTHKDMNSVIED 797 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,392,006 Number of Sequences: 219361 Number of extensions: 1339936 Number of successful extensions: 3300 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3174 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3299 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)