>ATS5_MOUSE (Q9R001) ADAMTS-5 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 5) (ADAM-TS
           5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (Implantin)
          Length = 930

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 175 AKLCEKGIGCTRGK-LHGSVLSLKPPRNIASSPWTPGVAVVIRQFCRKKHGTC 330
           +K CE+  G T  K L  S+L+       AS PW+   +  I +F    HG C
Sbjct: 423 SKFCEENFGTTEDKRLMSSILTSID----ASKPWSKCTSATITEFLDDGHGNC 471

>ATS5_BOVIN (Q9TT92) ADAMTS-5 (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 5) (ADAM-TS
           5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (ADAM-TS 11)
           (Fragment)
          Length = 207

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 175 AKLCEKGIGCTRGK-LHGSVLSLKPPRNIASSPWTPGVAVVIRQFCRKKHGTC 330
           +K CE+  G T  K L  S+L+       AS PW+   +  I +F    HG C
Sbjct: 21  SKFCEENFGSTEDKRLMSSILTSID----ASKPWSKCTSATITEFLDDGHGNC 69

>UPS5_ARATH (Q93Z75) Ureide permease 5 (AtUPS5)|
          Length = 413

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
 Frame = -1

Query: 260 AMFLGGLSDRTEP-----WSLPLVQPIPFSQSFAFLAGVQIGIGHLVQKISLVTCCLSVR 96
           A   GG+ + T         L  +Q    S  FA   GV + IG+L  + SL    LSV 
Sbjct: 65  AFVFGGIGESTHEAPSFITQLTQIQDNWPSVLFAMAGGVGLSIGNLATQYSLAFVGLSVT 124

Query: 95  AVTAVSYSENVEPGTDVSPYILLNEL 18
            VTA S +  V  GT V+ Y L N L
Sbjct: 125 EVTAASIT--VVVGTTVN-YFLDNGL 147

>ATS5_HUMAN (Q9UNA0) ADAMTS-5 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 5) (ADAM-TS
           5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (ADAM-TS 11)
          Length = 930

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 175 AKLCEKGIGCTRGK-LHGSVLSLKPPRNIASSPWTPGVAVVIRQFCRKKHGTC 330
           +K CE+  G T  K L  S+L+       AS PW+   +  I +F    HG C
Sbjct: 423 SKFCEETFGSTEDKRLMSSILTSID----ASKPWSKCTSATITEFLDDGHGNC 471

>ATR_DROME (Q9VXG8) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia|
            telangiectasia and Rad3-related protein homolog) (ATR
            homolog) (dATR) (Meiotic protein 41)
          Length = 2517

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 323  EHVKEDLWLALMARLREATQGMVLPTGACPHHPHRC 430
            E  K  LW +L AR+R+  + M+     C H P  C
Sbjct: 1280 EQKKVQLWQSLPARMRQLMEPMLHSCYTCVHRPSTC 1315

>RPOC1_HUPLU (Q5SCX9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 676

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 13  YSSSFNKIYGLTSVPGSTFSEYDTAVTARTDKQQVTRLIFWTRWPI 150
           Y + +N    L  +P   F  YD A+ A++ K        W RWP+
Sbjct: 559 YGNRYNLSPSLRQIP--YFYSYDDALRAKSQKLINLHSFLWLRWPV 602

>NQO3_THET8 (Q56223) NADH-quinone oxidoreductase subunit 3 (EC 1.6.99.5) (NADH|
           dehydrogenase I chain 3) (NDH-1 subunit 3)
          Length = 783

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
 Frame = -3

Query: 261 CDVSGWFE*QDRTVELAPGTTY--------SFFTEFCLSSRCTDRNWPSCPKDKSSYLLF 106
           CD  G  E QDRTVE      Y          +T F  + R  D++ P  P        F
Sbjct: 122 CDKGGACELQDRTVEYGLYEKYYQKGPLELPVYTRFEFTRRHVDKHHPLSP--------F 173

Query: 105 ISSCSDRCIVLRKC 64
           +    +RCI  ++C
Sbjct: 174 VILDRERCIHCKRC 187

>BTBD1_HUMAN (Q9H0C5) BTB/POZ domain-containing protein 1 (Hepatitis C virus|
           NS5A-transactivated protein 8) (NS5ATP8)
          Length = 482

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 263 DAMFLGGLSDRTEPWSLPLVQPIPFSQSFAFLAGVQIGIG 144
           DAMF GG++  +    LP V+P  F     FL   ++ IG
Sbjct: 105 DAMFNGGMATTSAEIELPDVEPAAFLALLRFLYSDEVQIG 144

>BTBD2_HUMAN (Q9BX70) BTB/POZ domain-containing protein 2|
          Length = 525

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 263 DAMFLGGLSDRTEPWSLPLVQPIPFSQSFAFLAGVQIGIG 144
           DAMF GG++  +    LP V+P  F     FL   ++ IG
Sbjct: 147 DAMFNGGMATTSTEIELPDVEPAAFLALLKFLYSDEVQIG 186

>PDXA_XYLFA (Q9PF39) 4-hydroxythreonine-4-phosphate dehydrogenase (EC|
           1.1.1.262) (4-(phosphohydroxy)-L-threonine
           dehydrogenase)
          Length = 330

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +1

Query: 145 PIPICTPARKAKLCEKGIGCTRGKLHGSV 231
           P P   PA  A LCE    C  G LHG V
Sbjct: 85  PDPANAPAVIAALCEAASDCVHGALHGIV 113

>BTBD1_MOUSE (P58544) BTB/POZ domain-containing protein 1 (Glucose signal|
           repressing protein)
          Length = 488

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 263 DAMFLGGLSDRTEPWSLPLVQPIPFSQSFAFLAGVQIGIG 144
           DAMF GG++  +    LP V+P  F     FL   ++ IG
Sbjct: 111 DAMFNGGMATTSAEIELPDVEPAAFLALLRFLYSDEVQIG 150

>BRN3_CHICK (Q91998) Brain-specific homeobox/POU domain protein 3 (Brn-3)|
          Length = 341

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +2

Query: 221 TVLSCHSNHPETSHHRPGLQGLQL*YVNFAEKSMEHVKEDLWLALMARLREATQGMVLP- 397
           +VL+ H  HP   HH+P  QGL+        + ++H+   L L           G+  P 
Sbjct: 100 SVLTTH--HPHHHHHQPA-QGLE-------GELLDHLNSALPLG----------GVPGPD 139

Query: 398 TGACPHHPHRCPKKISNQNHH 460
            G+ P HPH     I++  HH
Sbjct: 140 VGSTPSHPHSHMSAINHMAHH 160

>NIFK_AZOBR (P25314) Nitrogenase molybdenum-iron protein beta chain (EC|
           1.18.6.1) (Nitrogenase component I) (Dinitrogenase)
          Length = 521

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 21/83 (25%), Positives = 39/83 (46%)
 Frame = -1

Query: 296 ITTATPGVQGDDAMFLGGLSDRTEPWSLPLVQPIPFSQSFAFLAGVQIGIGHLVQKISLV 117
           +TT    V GDD    G +++     S+P   P+PF+ + AF+    +G  ++++ +   
Sbjct: 156 LTTCMAEVIGDDLS--GFINNAKNKESVPADFPVPFAHTPAFVGSHIVGYDNMIKGVLTH 213

Query: 116 TCCLSVRAVTAVSYSENVEPGTD 48
               S    T  + + N+ PG D
Sbjct: 214 FWGTSENFDTPKNETINLIPGFD 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,866,156
Number of Sequences: 219361
Number of extensions: 1268782
Number of successful extensions: 3697
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3697
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)