>ref|XM_467112.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1106

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 330 tcaaagaagatctttggctagctttaatggcacgtctacgg 370
           |||||||| ||||||||||| ||||||||| || |||||||
Sbjct: 675 tcaaagaacatctttggctaactttaatggtacatctacgg 635

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 330      tcaaagaagatctttggctagctttaatggcacgtctacgg 370
                |||||||| ||||||||||| ||||||||| || |||||||
Sbjct: 26491684 tcaaagaacatctttggctaactttaatggtacatctacgg 26491644

>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1003_B06
          Length = 131956

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 330   tcaaagaagatctttggctagctttaatggcacgtctacgg 370
             |||||||| ||||||||||| ||||||||| || |||||||
Sbjct: 91600 tcaaagaacatctttggctaactttaatggtacatctacgg 91560

>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0519E06
          Length = 170634

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 330   tcaaagaagatctttggctagctttaatggcacgtctacgg 370
             |||||||| ||||||||||| ||||||||| || |||||||
Sbjct: 34065 tcaaagaacatctttggctaactttaatggtacatctacgg 34025

>dbj|AK072538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132B16, full
           insert sequence
          Length = 1106

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 330 tcaaagaagatctttggctagctttaatggcacgtctacgg 370
           |||||||| ||||||||||| ||||||||| || |||||||
Sbjct: 675 tcaaagaacatctttggctaactttaatggtacatctacgg 635

>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 330    tcaaagaagatctttggctagctttaatggcacgtctacgg 370
              |||||||| ||||||||||| ||||||||| || |||||||
Sbjct: 197387 tcaaagaacatctttggctaactttaatggtacatctacgg 197347

>gb|AC156791.1| Mus musculus BAC clone RP24-250L13 from 9, complete sequence
          Length = 165073

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 335    gaagatctttggctagctttaat 357
              |||||||||||||||||||||||
Sbjct: 103065 gaagatctttggctagctttaat 103043

>gb|AC165081.3| Mus musculus BAC clone RP24-63B10 from chromosome 7, complete sequence
          Length = 182457

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 325    acatgtcaaagaagatctttg 345
              |||||||||||||||||||||
Sbjct: 167246 acatgtcaaagaagatctttg 167226

>gb|AC134870.4| Mus musculus BAC clone RP23-166E8 from chromosome 7, complete sequence
          Length = 165349

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 325   acatgtcaaagaagatctttg 345
             |||||||||||||||||||||
Sbjct: 31019 acatgtcaaagaagatctttg 30999

>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 449     caaaatcatcatcaataactg 469
               |||||||||||||||||||||
Sbjct: 2190865 caaaatcatcatcaataactg 2190885

>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 449     caaaatcatcatcaataactg 469
               |||||||||||||||||||||
Sbjct: 2261551 caaaatcatcatcaataactg 2261571

>gb|AC074320.12| Staphylococcus aureus clone sabac-41, complete sequence
          Length = 49479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 449  caaaatcatcatcaataactg 469
            |||||||||||||||||||||
Sbjct: 4393 caaaatcatcatcaataactg 4413

>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 449     caaaatcatcatcaataactg 469
               |||||||||||||||||||||
Sbjct: 2186657 caaaatcatcatcaataactg 2186677

>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 449     caaaatcatcatcaataactg 469
               |||||||||||||||||||||
Sbjct: 2197381 caaaatcatcatcaataactg 2197401

>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 449     caaaatcatcatcaataactg 469
               |||||||||||||||||||||
Sbjct: 2250459 caaaatcatcatcaataactg 2250479

>gb|AC025592.10| Staphylococcus aureus clone sabac-43, complete sequence
          Length = 55389

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 449   caaaatcatcatcaataactg 469
             |||||||||||||||||||||
Sbjct: 10718 caaaatcatcatcaataactg 10738

>gb|AC078934.3| Staphylococcus aureus clone sabac-11, complete sequence
          Length = 55390

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 449   caaaatcatcatcaataactg 469
             |||||||||||||||||||||
Sbjct: 10718 caaaatcatcatcaataactg 10738

>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 449     caaaatcatcatcaataactg 469
               |||||||||||||||||||||
Sbjct: 2211760 caaaatcatcatcaataactg 2211780

>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 449     caaaatcatcatcaataactg 469
               |||||||||||||||||||||
Sbjct: 2185119 caaaatcatcatcaataactg 2185139

>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 449     caaaatcatcatcaataactg 469
               |||||||||||||||||||||
Sbjct: 2289472 caaaatcatcatcaataactg 2289492

>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 449     caaaatcatcatcaataactg 469
               |||||||||||||||||||||
Sbjct: 2149265 caaaatcatcatcaataactg 2149285

>dbj|D85816.2| Staphylococcus aureus gene for HmrA, complete cds
          Length = 2063

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 449  caaaatcatcatcaataactg 469
            |||||||||||||||||||||
Sbjct: 1278 caaaatcatcatcaataactg 1258

>gb|AY809038.1| Schistosoma japonicum SJCHGC03874 protein mRNA, partial cds
          Length = 764

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gcagaaaaaagcatggaaca 327
           ||||||||||||||||||||
Sbjct: 679 gcagaaaaaagcatggaaca 660

>gb|AC138116.4| Mus musculus BAC clone RP24-242H5 from chromosome 15, complete sequence
          Length = 164014

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   agaaaaaagcatggaacatg 329
             ||||||||||||||||||||
Sbjct: 93185 agaaaaaagcatggaacatg 93204

>gb|AC122339.3| Mus musculus BAC clone RP23-353L10 from chromosome 5, complete sequence
          Length = 203685

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tgtcctgtcactcaaaccac 247
             ||||||||||||||||||||
Sbjct: 54447 tgtcctgtcactcaaaccac 54466

>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 100     actgataaacagcaggtaactaga 123
               ||||||||||||||| ||||||||
Sbjct: 2340465 actgataaacagcagttaactaga 2340442

>gb|AC134420.8| Mus musculus chromosome 15, clone RP23-478J5, complete sequence
          Length = 190455

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    agaaaaaagcatggaacatg 329
              ||||||||||||||||||||
Sbjct: 140353 agaaaaaagcatggaacatg 140334

>gb|AC162465.3| Mus musculus 6 BAC RP24-108G5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 203546

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   actcaaaccacccagaaaca 256
             ||||||||||||||||||||
Sbjct: 88896 actcaaaccacccagaaaca 88877

>gb|AC023403.9| Homo sapiens chromosome 8, clone RP11-563N12, complete sequence
          Length = 193461

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 247    cccagaaacatcgcatcatcgccctgga 274
              |||||||||||| |||||| ||||||||
Sbjct: 167010 cccagaaacatctcatcattgccctgga 166983

>dbj|AK143842.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
           library, clone:F430204C11 product:hypothetical protein,
           full insert sequence
          Length = 2112

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 actcaaaccacccagaaaca 256
           ||||||||||||||||||||
Sbjct: 410 actcaaaccacccagaaaca 429

>gb|AC155238.2| Mus musculus BAC clone RP24-445E24 from chromosome 12, complete
             sequence
          Length = 128680

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   ggatggtgcttccaacaggt 403
             ||||||||||||||||||||
Sbjct: 18888 ggatggtgcttccaacaggt 18869

>gb|AF160864.1| Tetrahymena pyriformis mitochondrial DNA, complete genome
          Length = 47296

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   aatcaaaatcatcatcaata 465
             ||||||||||||||||||||
Sbjct: 30623 aatcaaaatcatcatcaata 30604

>gb|AF396436.1| Tetrahymena thermophila strain SB210 mitochondrion, complete genome
          Length = 47577

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   aatcaaaatcatcatcaata 465
             ||||||||||||||||||||
Sbjct: 30923 aatcaaaatcatcatcaata 30904

>gb|AC158657.2| Mus musculus 6 BAC RP23-395C12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 202215

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   actcaaaccacccagaaaca 256
             ||||||||||||||||||||
Sbjct: 53389 actcaaaccacccagaaaca 53408

>gb|BC091230.1| Rattus norvegicus neuropathy target esterase like 1, mRNA (cDNA clone
            MGC:108975 IMAGE:7321805), complete cds
          Length = 4472

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 405  cttgtcctcatcaccctcat 424
            ||||||||||||||||||||
Sbjct: 3257 cttgtcctcatcaccctcat 3276

>emb|CT030196.9| Mouse DNA sequence from clone RP23-282B14 on chromosome 12, complete
              sequence
          Length = 215752

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    ggatggtgcttccaacaggt 403
              ||||||||||||||||||||
Sbjct: 121045 ggatggtgcttccaacaggt 121064


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,217,298
Number of Sequences: 3902068
Number of extensions: 4217298
Number of successful extensions: 80520
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80224
Number of HSP's gapped (non-prelim): 296
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)