Clone Name | rbart08b02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7 | 30 | 2.4 | 2 | UXUA_HAEI8 (Q4QPI9) Mannonate dehydratase (EC 4.2.1.8) (D-mannon... | 29 | 3.1 | 3 | UXUA_MANSM (Q65V66) Mannonate dehydratase (EC 4.2.1.8) (D-mannon... | 28 | 6.9 |
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>BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7| Length = 1132 Score = 29.6 bits (65), Expect = 2.4 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1 Query: 70 LSRVPERHTHSTRSKRRGAQVTEFQNGP 153 LS +P+RHTH++R K Q T+ + P Sbjct: 912 LSCIPQRHTHTSRKKHTLEQKTDTRENP 939
>UXUA_HAEI8 (Q4QPI9) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 394 Score = 29.3 bits (64), Expect = 3.1 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +2 Query: 11 TSLPVVRDTSPESRRTHVTSFLESQKGTLIPLGQNVG 121 T L +D SPE RTH+ FL ++P+ Q VG Sbjct: 195 TQLDRYKDISPEKFRTHLAYFLNE----IVPVAQEVG 227
>UXUA_MANSM (Q65V66) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 394 Score = 28.1 bits (61), Expect = 6.9 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +2 Query: 29 RDTSPESRRTHVTSFLESQKGTLIPLGQNVG 121 +D SPE RTH+ FL +IP+ Q VG Sbjct: 201 KDISPEKFRTHLAYFLNE----IIPVAQEVG 227 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,121,675 Number of Sequences: 219361 Number of extensions: 329743 Number of successful extensions: 813 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 809 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 813 length of database: 80,573,946 effective HSP length: 28 effective length of database: 74,431,838 effective search space used: 1786364112 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)