Clone Name | rbart08b01 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ATS5_BOVIN (Q9TT92) ADAMTS-5 (EC 3.4.24.-) (A disintegrin and me... | 33 | 0.41 | 2 | ATS5_MOUSE (Q9R001) ADAMTS-5 precursor (EC 3.4.24.-) (A disinteg... | 33 | 0.41 | 3 | ATS5_HUMAN (Q9UNA0) ADAMTS-5 precursor (EC 3.4.24.-) (A disinteg... | 33 | 0.41 |
---|
>ATS5_BOVIN (Q9TT92) ADAMTS-5 (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 5) (ADAM-TS 5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (ADAM-TS 11) (Fragment) Length = 207 Score = 33.1 bits (74), Expect = 0.41 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 7/41 (17%) Frame = -3 Query: 252 EPSVCPGRDLCDLTWCSLL-------LEKKPSATKSLLCGR 151 E SVCPG D+C WC+++ L KK A + CG+ Sbjct: 102 EYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEGTPCGK 142
>ATS5_MOUSE (Q9R001) ADAMTS-5 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 5) (ADAM-TS 5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (Implantin) Length = 930 Score = 33.1 bits (74), Expect = 0.41 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 7/41 (17%) Frame = -3 Query: 252 EPSVCPGRDLCDLTWCSLL-------LEKKPSATKSLLCGR 151 E SVCPG D+C WC+++ L KK A + CG+ Sbjct: 504 EYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEGTPCGK 544
>ATS5_HUMAN (Q9UNA0) ADAMTS-5 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 5) (ADAM-TS 5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (ADAM-TS 11) Length = 930 Score = 33.1 bits (74), Expect = 0.41 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 7/41 (17%) Frame = -3 Query: 252 EPSVCPGRDLCDLTWCSLL-------LEKKPSATKSLLCGR 151 E SVCPG D+C WC+++ L KK A + CG+ Sbjct: 504 EYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEGTPCGK 544 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,612,628 Number of Sequences: 219361 Number of extensions: 1520093 Number of successful extensions: 3555 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3555 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)