ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
2dbj|AK102566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
4emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103... 131 2e-27
5ref|NM_180320.1| Arabidopsis thaliana catalytic/ metal ion bindi... 58 2e-05
6ref|NM_117020.3| Arabidopsis thaliana catalytic/ metal ion bindi... 58 2e-05
7gb|AY122912.1| Arabidopsis thaliana unknown protein (At4g09520) ... 58 2e-05
8gb|AY096623.1| Arabidopsis thaliana unknown protein (At3g30841) ... 58 2e-05
9gb|AY072183.1| Arabidopsis thaliana unknown protein (At3g30841) ... 58 2e-05
10emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, ... 58 2e-05
11emb|BX824718.1|CNS0A5M8 Arabidopsis thaliana Full-length cDNA Co... 58 2e-05
12emb|BX826833.1|CNS0A434 Arabidopsis thaliana Full-length cDNA Co... 58 2e-05
13dbj|AP002043.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 58 2e-05
14gb|AC006567.1|AC006567 Arabidopsis thaliana BAC T15G18 from chro... 58 2e-05
15ref|NM_124737.2| Arabidopsis thaliana unknown protein AT5G53570 ... 46 0.092
16gb|AY102156.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, comp... 46 0.092
17dbj|AK221904.1| Arabidopsis thaliana mRNA for GTPase activator p... 46 0.092
18gb|AY039546.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, comp... 46 0.092
19emb|BX831263.1|CNS0A1Q7 Arabidopsis thaliana Full-length cDNA Co... 46 0.092
20dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 46 0.092
21emb|CR450825.5| Zebrafish DNA sequence from clone DKEY-117B24 in... 44 0.36
22gb|AC127245.5| Mus musculus BAC clone RP24-422M4 from chromosome... 42 1.4
23gb|AC164122.5| Mus musculus BAC clone RP24-409O23 from chromosom... 42 1.4
24gb|AC147222.4| Mus musculus BAC clone RP23-69L20 from chromosome... 40 5.7
25emb|CR762389.21| Zebrafish DNA sequence from clone DKEY-240O2 in... 40 5.7
26emb|CR450795.8| Zebrafish DNA sequence from clone CH211-203J19 i... 40 5.7
27emb|BX465201.38| Zebrafish DNA sequence from clone DKEY-15F11 in... 40 5.7
28gb|AC122868.2| Mus musculus BAC clone RP23-148H17 from 6, comple... 40 5.7
29ref|XM_724595.1| Plasmodium yoelii yoelii str. 17XNL Homo sapien... 40 5.7
30gb|AC104692.1| Homo sapiens BAC clone RP11-208G20 from 7, comple... 40 5.7
31ref|XM_675259.1| Plasmodium berghei strain ANKA ATP dependent RN... 40 5.7
32emb|BX649204.22| Zebrafish DNA sequence from clone DKEY-29K16 in... 40 5.7
33emb|BX950872.7| Zebrafish DNA sequence from clone CH211-130M23 i... 40 5.7
34emb|BX511137.14| Zebrafish DNA sequence from clone DKEY-192A11 i... 40 5.7
35emb|BX901893.12| Zebrafish DNA sequence from clone CH211-72G23 i... 40 5.7
36emb|AL132654.15|HSJ450M14 Human DNA sequence from clone RP3-450M... 40 5.7
37emb|AL096867.15|HSJ365O19 Human DNA sequence from clone RP3-365O... 40 5.7
38gb|AF007261.1| Reclinomonas americana mitochondrion, complete ge... 40 5.7
39emb|CR846090.6| Zebrafish DNA sequence from clone DKEYP-78E10 in... 40 5.7
40emb|CR376801.8| Zebrafish DNA sequence from clone CH211-13K18 in... 40 5.7
41emb|CR847800.4| Zebrafish DNA sequence from clone DKEY-182M5 in ... 40 5.7
42emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in l... 40 5.7
43emb|BX927310.10| Zebrafish DNA sequence from clone DKEY-154B15 i... 40 5.7
44emb|BX323989.4| Zebrafish DNA sequence from clone DKEY-101O12 in... 40 5.7
45emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 i... 40 5.7
46emb|CR318622.1| Zebrafish DNA sequence from clone DKEY-251O17 in... 40 5.7
47emb|BX649358.3| Zebrafish DNA sequence from clone CH211-69P6 in ... 40 5.7
48gb|AF252392.1|AF252392 Sporothrix schenckii cyclin-dependent pro... 40 5.7
49gb|AF252391.1|AF252391 Sporothrix schenckii cyclin-dependent pro... 40 5.7
50emb|BX004867.7| Zebrafish DNA sequence from clone CH211-159K2 in... 40 5.7
51emb|BX247881.6| Zebrafish DNA sequence from clone DKEY-10M1 in l... 40 5.7
52emb|AL929322.6| Zebrafish DNA sequence from clone DKEY-10H23, co... 40 5.7
53ref|XM_317179.2| Anopheles gambiae str. PEST ENSANGP00000025201 ... 40 5.7
54emb|CR392004.12| Zebrafish DNA sequence from clone CH211-165H11 ... 40 5.7
55emb|BX927103.12| Zebrafish DNA sequence from clone DKEY-262M23 i... 40 5.7
56emb|CR352257.8| Zebrafish DNA sequence from clone CH211-261B21 i... 40 5.7
57emb|BX005283.6| Zebrafish DNA sequence from clone CH211-93G21, c... 40 5.7
58emb|AL928941.12| Zebrafish DNA sequence from clone CH211-236L14 ... 40 5.7
59emb|AL929038.13| Zebrafish DNA sequence from clone DKEY-34D20 in... 40 5.7
60emb|CR932980.12| Zebrafish DNA sequence from clone DKEY-81L13 in... 40 5.7
61emb|AL603715.7| Zebrafish DNA sequence from clone BUSM1-248F2 Co... 40 5.7
62emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus co... 40 5.7 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  131 bits (66), Expect = 2e-27
 Identities = 126/146 (86%)
 Strand = Plus / Plus

                                                                            
Query: 100      taatcattctttgctttcatgaacttcttgatgatgcccatcatctcacttccagggaac 159
                ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 21360832 taatcgttcttcgctttgatgaacttcttgatgatgcccatcatctcacttccagggaaa 21360891

                                                                            
Query: 160      cgcccaaggcacccccttgcggcagcaatctcggtgtattcacacactttatcgccacta 219
                || |||||||| |||||||| || ||||||||| || ||||| | ||   ||||||||| 
Sbjct: 21360892 cgtccaaggcagccccttgcagcggcaatctcgttgaattcaaagacagaatcgccactg 21360951

                                          
Query: 220      aaagctttacgctcctcaggcttgcg 245
                |||||||| ||||  |||| ||||||
Sbjct: 21360952 aaagctttgcgctgatcagacttgcg 21360977



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 125/150 (83%)
 Strand = Plus / Plus

                                                                            
Query: 273      atcttctccggacttaaccgaaggcagcgggaaatcgtcgaggggggtgttcatcacatt 332
                ||||||||| || ||||| ||||| ||| |||||||||| ||||||  ||| || |||||
Sbjct: 21361005 atcttctccagatttaactgaaggaagcaggaaatcgtccagggggaagttgataacatt 21361064

                                                                            
Query: 333      gtcctccccaattgctcccacgaaatctctcagccggcatatcgcaaacgggacaggttc 392
                ||||||||| || ||||| ||||||||||| || ||||| | | |||| || || |||||
Sbjct: 21361065 gtcctcccccatagctcctacgaaatctctaagtcggcacaacacaaaaggaacgggttc 21361124

                                              
Query: 393      gaagctgtggtctccgtactcaacaggagt 422
                 || |||||||| ||||||||||| |||||
Sbjct: 21361125 aaaactgtggtcaccgtactcaactggagt 21361154
to top
>dbj|AK102566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097K23, full
            insert sequence
          Length = 1770

 Score =  131 bits (66), Expect = 2e-27
 Identities = 126/146 (86%)
 Strand = Plus / Minus

                                                                        
Query: 100  taatcattctttgctttcatgaacttcttgatgatgcccatcatctcacttccagggaac 159
            ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1588 taatcgttcttcgctttgatgaacttcttgatgatgcccatcatctcacttccagggaaa 1529

                                                                        
Query: 160  cgcccaaggcacccccttgcggcagcaatctcggtgtattcacacactttatcgccacta 219
            || |||||||| |||||||| || ||||||||| || ||||| | ||   ||||||||| 
Sbjct: 1528 cgtccaaggcagccccttgcagcggcaatctcgttgaattcaaagacagaatcgccactg 1469

                                      
Query: 220  aaagctttacgctcctcaggcttgcg 245
            |||||||| ||||  |||| ||||||
Sbjct: 1468 aaagctttgcgctgatcagacttgcg 1443



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 125/150 (83%)
 Strand = Plus / Minus

                                                                        
Query: 273  atcttctccggacttaaccgaaggcagcgggaaatcgtcgaggggggtgttcatcacatt 332
            ||||||||| || ||||| ||||| ||| |||||||||| ||||||  ||| || |||||
Sbjct: 1415 atcttctccagatttaactgaaggaagcaggaaatcgtccagggggaagttgataacatt 1356

                                                                        
Query: 333  gtcctccccaattgctcccacgaaatctctcagccggcatatcgcaaacgggacaggttc 392
            ||||||||| || ||||| ||||||||||| || ||||| | | |||| || || |||||
Sbjct: 1355 gtcctcccccatagctcctacgaaatctctaagtcggcacaacacaaaaggaacgggttc 1296

                                          
Query: 393  gaagctgtggtctccgtactcaacaggagt 422
             || |||||||| ||||||||||| |||||
Sbjct: 1295 aaaactgtggtcaccgtactcaactggagt 1266
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  131 bits (66), Expect = 2e-27
 Identities = 126/146 (86%)
 Strand = Plus / Plus

                                                                            
Query: 100      taatcattctttgctttcatgaacttcttgatgatgcccatcatctcacttccagggaac 159
                ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 21287051 taatcgttcttcgctttgatgaacttcttgatgatgcccatcatctcacttccagggaaa 21287110

                                                                            
Query: 160      cgcccaaggcacccccttgcggcagcaatctcggtgtattcacacactttatcgccacta 219
                || |||||||| |||||||| || ||||||||| || ||||| | ||   ||||||||| 
Sbjct: 21287111 cgtccaaggcagccccttgcagcggcaatctcgttgaattcaaagacagaatcgccactg 21287170

                                          
Query: 220      aaagctttacgctcctcaggcttgcg 245
                |||||||| ||||  |||| ||||||
Sbjct: 21287171 aaagctttgcgctgatcagacttgcg 21287196



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 125/150 (83%)
 Strand = Plus / Plus

                                                                            
Query: 273      atcttctccggacttaaccgaaggcagcgggaaatcgtcgaggggggtgttcatcacatt 332
                ||||||||| || ||||| ||||| ||| |||||||||| ||||||  ||| || |||||
Sbjct: 21287224 atcttctccagatttaactgaaggaagcaggaaatcgtccagggggaagttgataacatt 21287283

                                                                            
Query: 333      gtcctccccaattgctcccacgaaatctctcagccggcatatcgcaaacgggacaggttc 392
                ||||||||| || ||||| ||||||||||| || ||||| | | |||| || || |||||
Sbjct: 21287284 gtcctcccccatagctcctacgaaatctctaagtcggcacaacacaaaaggaacgggttc 21287343

                                              
Query: 393      gaagctgtggtctccgtactcaacaggagt 422
                 || |||||||| ||||||||||| |||||
Sbjct: 21287344 aaaactgtggtcaccgtactcaactggagt 21287373
to top
>emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103_B10 of library Monsanto
           from chromosome 12 of cultivar Nipponbare of ssp.
           japonica of Oryza sativa (rice), complete sequence
          Length = 95132

 Score =  131 bits (66), Expect = 2e-27
 Identities = 126/146 (86%)
 Strand = Plus / Minus

                                                                       
Query: 100 taatcattctttgctttcatgaacttcttgatgatgcccatcatctcacttccagggaac 159
           ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 446 taatcgttcttcgctttgatgaacttcttgatgatgcccatcatctcacttccagggaaa 387

                                                                       
Query: 160 cgcccaaggcacccccttgcggcagcaatctcggtgtattcacacactttatcgccacta 219
           || |||||||| |||||||| || ||||||||| || ||||| | ||   ||||||||| 
Sbjct: 386 cgtccaaggcagccccttgcagcggcaatctcgttgaattcaaagacagaatcgccactg 327

                                     
Query: 220 aaagctttacgctcctcaggcttgcg 245
           |||||||| ||||  |||| ||||||
Sbjct: 326 aaagctttgcgctgatcagacttgcg 301



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 125/150 (83%)
 Strand = Plus / Minus

                                                                       
Query: 273 atcttctccggacttaaccgaaggcagcgggaaatcgtcgaggggggtgttcatcacatt 332
           ||||||||| || ||||| ||||| ||| |||||||||| ||||||  ||| || |||||
Sbjct: 273 atcttctccagatttaactgaaggaagcaggaaatcgtccagggggaagttgataacatt 214

                                                                       
Query: 333 gtcctccccaattgctcccacgaaatctctcagccggcatatcgcaaacgggacaggttc 392
           ||||||||| || ||||| ||||||||||| || ||||| | | |||| || || |||||
Sbjct: 213 gtcctcccccatagctcctacgaaatctctaagtcggcacaacacaaaaggaacgggttc 154

                                         
Query: 393 gaagctgtggtctccgtactcaacaggagt 422
            || |||||||| ||||||||||| |||||
Sbjct: 153 aaaactgtggtcaccgtactcaactggagt 124
to top
>ref|NM_180320.1| Arabidopsis thaliana catalytic/ metal ion binding AT3G30841 mRNA,
            complete cds
          Length = 1722

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 382  gggacaggttcgaagctgtggtctccgtactcaacaggagt 422
            |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 1313 gggacaggctcaaagctgtggtctccatactcaacaggagt 1273
to top
>ref|NM_117020.3| Arabidopsis thaliana catalytic/ metal ion binding / phosphoglycerate
            mutase AT4G09520 mRNA, complete cds
          Length = 1652

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 382  gggacaggttcgaagctgtggtctccgtactcaacaggagt 422
            |||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 1292 gggacaggctcgaagctgtggtctccatactcaactggagt 1252
to top
>gb|AY122912.1| Arabidopsis thaliana unknown protein (At4g09520) mRNA, complete cds
          Length = 1510

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 382  gggacaggttcgaagctgtggtctccgtactcaacaggagt 422
            |||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 1193 gggacaggctcgaagctgtggtctccatactcaactggagt 1153
to top
>gb|AY096623.1| Arabidopsis thaliana unknown protein (At3g30841) mRNA, complete cds
          Length = 1519

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 382  gggacaggttcgaagctgtggtctccgtactcaacaggagt 422
            |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 1205 gggacaggctcaaagctgtggtctccatactcaacaggagt 1165
to top
>gb|AY072183.1| Arabidopsis thaliana unknown protein (At3g30841) mRNA, complete cds
          Length = 1738

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 382  gggacaggttcgaagctgtggtctccgtactcaacaggagt 422
            |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 1313 gggacaggctcaaagctgtggtctccatactcaacaggagt 1273
to top
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27
          Length = 197394

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 382   gggacaggttcgaagctgtggtctccgtactcaacaggagt 422
             |||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 42872 gggacaggctcgaagctgtggtctccatactcaactggagt 42912
to top
>emb|BX824718.1|CNS0A5M8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH67ZF10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1712

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 382  gggacaggttcgaagctgtggtctccgtactcaacaggagt 422
            |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 1352 gggacaggctcaaagctgtggtctccatactcaacaggagt 1312
to top
>emb|BX826833.1|CNS0A434 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB68ZA10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1652

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 382  gggacaggttcgaagctgtggtctccgtactcaacaggagt 422
            |||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 1292 gggacaggctcgaagctgtggtctccatactcaactggagt 1252
to top
>dbj|AP002043.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJI6
          Length = 83912

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 382   gggacaggttcgaagctgtggtctccgtactcaacaggagt 422
             |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 15368 gggacaggctcaaagctgtggtctccatactcaacaggagt 15328
to top
>gb|AC006567.1|AC006567 Arabidopsis thaliana BAC T15G18 from chromosome IV, near 25 cM,
             complete sequence
          Length = 113800

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 382   gggacaggttcgaagctgtggtctccgtactcaacaggagt 422
             |||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 26434 gggacaggctcgaagctgtggtctccatactcaactggagt 26394
to top
>ref|NM_124737.2| Arabidopsis thaliana unknown protein AT5G53570 mRNA, complete cds
          Length = 2367

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 123  cttcttgatgatgcccatcatct 145
            |||||||||||||||||||||||
Sbjct: 1956 cttcttgatgatgcccatcatct 1978
to top
>gb|AY102156.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, complete cds
          Length = 1653

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 123  cttcttgatgatgcccatcatct 145
            |||||||||||||||||||||||
Sbjct: 1576 cttcttgatgatgcccatcatct 1598
to top
>dbj|AK221904.1| Arabidopsis thaliana mRNA for GTPase activator protein of Rab-like
           small GTPases-like protein, partial cds, clone:
           RAFL22-33-M06
          Length = 1275

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 123 cttcttgatgatgcccatcatct 145
           |||||||||||||||||||||||
Sbjct: 869 cttcttgatgatgcccatcatct 891
to top
>gb|AY039546.1| Arabidopsis thaliana AT5g53570/MNC6_11 mRNA, complete cds
          Length = 2273

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 123  cttcttgatgatgcccatcatct 145
            |||||||||||||||||||||||
Sbjct: 1955 cttcttgatgatgcccatcatct 1977
to top
>emb|BX831263.1|CNS0A1Q7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS72ZG10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2258

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 123  cttcttgatgatgcccatcatct 145
            |||||||||||||||||||||||
Sbjct: 1898 cttcttgatgatgcccatcatct 1920
to top
>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6
          Length = 82952

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 123   cttcttgatgatgcccatcatct 145
             |||||||||||||||||||||||
Sbjct: 47234 cttcttgatgatgcccatcatct 47212
to top
>emb|CR450825.5| Zebrafish DNA sequence from clone DKEY-117B24 in linkage group 11,
             complete sequence
          Length = 90653

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 104   cattctttgctttcatgaactt 125
             ||||||||||||||||||||||
Sbjct: 38566 cattctttgctttcatgaactt 38587
to top
>gb|AC127245.5| Mus musculus BAC clone RP24-422M4 from chromosome 6, complete sequence
          Length = 181475

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    tcatctcacttccagggaacc 160
              |||||||||||||||||||||
Sbjct: 106309 tcatctcacttccagggaacc 106289
to top
>gb|AC164122.5| Mus musculus BAC clone RP24-409O23 from chromosome 6, complete sequence
          Length = 165015

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    tcatctcacttccagggaacc 160
              |||||||||||||||||||||
Sbjct: 159179 tcatctcacttccagggaacc 159159
to top
>gb|AC147222.4| Mus musculus BAC clone RP23-69L20 from chromosome 6, complete sequence
          Length = 182525

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     gtcattattacaaagatcaa 83
              ||||||||||||||||||||
Sbjct: 164899 gtcattattacaaagatcaa 164880
to top
>emb|CR762389.21| Zebrafish DNA sequence from clone DKEY-240O2 in linkage group 5,
             complete sequence
          Length = 110973

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 75763 ttctttgctttcatgaactt 75782
to top
>emb|CR450795.8| Zebrafish DNA sequence from clone CH211-203J19 in linkage group 23,
             complete sequence
          Length = 162230

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 54750 ttctttgctttcatgaactt 54731
to top
>emb|BX465201.38| Zebrafish DNA sequence from clone DKEY-15F11 in linkage group 14,
              complete sequence
          Length = 262688

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ttctttgctttcatgaactt 125
              ||||||||||||||||||||
Sbjct: 255543 ttctttgctttcatgaactt 255562
to top
>gb|AC122868.2| Mus musculus BAC clone RP23-148H17 from 6, complete sequence
          Length = 202374

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     gtcattattacaaagatcaa 83
              ||||||||||||||||||||
Sbjct: 111387 gtcattattacaaagatcaa 111406
to top
>ref|XM_724595.1| Plasmodium yoelii yoelii str. 17XNL Homo sapiens KIAA0052 protein
            (PY01861) partial mRNA
          Length = 3930

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  ttctgaatcatcagttaaat 274
            ||||||||||||||||||||
Sbjct: 1482 ttctgaatcatcagttaaat 1463
to top
>gb|AC104692.1| Homo sapiens BAC clone RP11-208G20 from 7, complete sequence
          Length = 148606

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 67     attattacaaagatcaagtacagg 90
              ||||||||||||| ||||||||||
Sbjct: 131382 attattacaaagaccaagtacagg 131359
to top
>ref|XM_675259.1| Plasmodium berghei strain ANKA ATP dependent RNA helicase,
            (PB001112.02.0) partial mRNA
          Length = 3900

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  ttctgaatcatcagttaaat 274
            ||||||||||||||||||||
Sbjct: 1482 ttctgaatcatcagttaaat 1463
to top
>emb|BX649204.22| Zebrafish DNA sequence from clone DKEY-29K16 in linkage group 12,
             complete sequence
          Length = 63340

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 27022 ttctttgctttcatgaactt 27003
to top
>emb|BX950872.7| Zebrafish DNA sequence from clone CH211-130M23 in linkage group 5,
             complete sequence
          Length = 141660

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 26402 ttctttgctttcatgaactt 26383
to top
>emb|BX511137.14| Zebrafish DNA sequence from clone DKEY-192A11 in linkage group 7,
             complete sequence
          Length = 214145

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 61418 ttctttgctttcatgaactt 61437
to top
>emb|BX901893.12| Zebrafish DNA sequence from clone CH211-72G23 in linkage group 1,
             complete sequence
          Length = 103132

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 98703 ttctttgctttcatgaactt 98722
to top
>emb|AL132654.15|HSJ450M14 Human DNA sequence from clone RP3-450M14 on chromosome 20 Contains a
             SIPL protein (SIPL) pseudogene and the LPIN3 gene for
             lipin 3, complete sequence
          Length = 29163

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    gatcaagtacagggttaggc 97
             ||||||||||||||||||||
Sbjct: 28015 gatcaagtacagggttaggc 28034
to top
>emb|AL096867.15|HSJ365O19 Human DNA sequence from clone RP3-365O19 on chromosome 6q23.1-24.3
              Contains the 5' end of the GRM1 gene for metabotropic
              glutamate receptor 1, complete sequence
          Length = 156935

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     tattacaaagatcaagtaca 88
              ||||||||||||||||||||
Sbjct: 148150 tattacaaagatcaagtaca 148169
to top
>gb|AF007261.1| Reclinomonas americana mitochondrion, complete genome
          Length = 69034

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  tattcctatcggattaagct 40
           ||||||||||||||||||||
Sbjct: 677 tattcctatcggattaagct 658
to top
>emb|CR846090.6| Zebrafish DNA sequence from clone DKEYP-78E10 in linkage group 14,
             complete sequence
          Length = 78515

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 17157 ttctttgctttcatgaactt 17138
to top
>emb|CR376801.8| Zebrafish DNA sequence from clone CH211-13K18 in linkage group 10,
              complete sequence
          Length = 199715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ttctttgctttcatgaactt 125
              ||||||||||||||||||||
Sbjct: 172628 ttctttgctttcatgaactt 172647
to top
>emb|CR847800.4| Zebrafish DNA sequence from clone DKEY-182M5 in linkage group 14,
             complete sequence
          Length = 187193

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 73510 ttctttgctttcatgaactt 73529
to top
>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains
              the gene for a novel protein (zgc:63880), the 3' end of the
              gene for a novel protein similar to vertebrate KCND2, the
              5' end of the ing3 gene for inhibitor of growth family
              member 3 and a CpG island, complete sequence
          Length = 200582

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    ttctttgctttcatgaactt 125
              ||||||||||||||||||||
Sbjct: 139195 ttctttgctttcatgaactt 139176
to top
>emb|BX927310.10| Zebrafish DNA sequence from clone DKEY-154B15 in linkage group 19,
             complete sequence
          Length = 99611

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 69361 ttctttgctttcatgaactt 69342
to top
>emb|BX323989.4| Zebrafish DNA sequence from clone DKEY-101O12 in linkage group 23,
             complete sequence
          Length = 198365

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 72672 ttctttgctttcatgaactt 72691
to top
>emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 in linkage group 8,
             complete sequence
          Length = 168607

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 35561 ttctttgctttcatgaactt 35542
to top
>emb|CR318622.1| Zebrafish DNA sequence from clone DKEY-251O17 in linkage group 5,
             complete sequence
          Length = 54773

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 26391 ttctttgctttcatgaactt 26372
to top
>emb|BX649358.3| Zebrafish DNA sequence from clone CH211-69P6 in linkage group 13,
             complete sequence
          Length = 181307

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 42981 ttctttgctttcatgaactt 42962
to top
>gb|AF252392.1|AF252392 Sporothrix schenckii cyclin-dependent protein kinase CDC2 (cdc2)
           mRNA, complete cds
          Length = 1505

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 116 tcatgaacttcttgatgatg 135
           ||||||||||||||||||||
Sbjct: 808 tcatgaacttcttgatgatg 789
to top
>gb|AF252391.1|AF252391 Sporothrix schenckii cyclin-dependent protein kinase CDC2 (cdc2)
            gene, complete cds
          Length = 3168

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  tcatgaacttcttgatgatg 135
            ||||||||||||||||||||
Sbjct: 1440 tcatgaacttcttgatgatg 1421
to top
>emb|BX004867.7| Zebrafish DNA sequence from clone CH211-159K2 in linkage group 14,
             complete sequence
          Length = 160087

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 97513 ttctttgctttcatgaactt 97494
to top
>emb|BX247881.6| Zebrafish DNA sequence from clone DKEY-10M1 in linkage group 13,
             complete sequence
          Length = 219382

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 43104 ttctttgctttcatgaactt 43085
to top
>emb|AL929322.6| Zebrafish DNA sequence from clone DKEY-10H23, complete sequence
          Length = 220527

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ttctttgctttcatgaactt 125
              ||||||||||||||||||||
Sbjct: 103394 ttctttgctttcatgaactt 103413
to top
>ref|XM_317179.2| Anopheles gambiae str. PEST ENSANGP00000025201
           (ENSANGG00000020807), partial mRNA
          Length = 1043

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 cttcttgatgatgcccatca 142
           ||||||||||||||||||||
Sbjct: 593 cttcttgatgatgcccatca 574
to top
>emb|CR392004.12| Zebrafish DNA sequence from clone CH211-165H11 in linkage group 18,
             complete sequence
          Length = 64955

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 22470 ttctttgctttcatgaactt 22489
to top
>emb|BX927103.12| Zebrafish DNA sequence from clone DKEY-262M23 in linkage group 18,
             complete sequence
          Length = 185008

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 16488 ttctttgctttcatgaactt 16507
to top
>emb|CR352257.8| Zebrafish DNA sequence from clone CH211-261B21 in linkage group 7,
             complete sequence
          Length = 159979

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 85788 ttctttgctttcatgaactt 85807
to top
>emb|BX005283.6| Zebrafish DNA sequence from clone CH211-93G21, complete sequence
          Length = 156246

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 60176 ttctttgctttcatgaactt 60195
to top
>emb|AL928941.12| Zebrafish DNA sequence from clone CH211-236L14 in linkage group 25,
             complete sequence
          Length = 146652

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 31959 ttctttgctttcatgaactt 31978
to top
>emb|AL929038.13| Zebrafish DNA sequence from clone DKEY-34D20 in linkage group 20,
              complete sequence
          Length = 213980

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    ttctttgctttcatgaactt 125
              ||||||||||||||||||||
Sbjct: 108348 ttctttgctttcatgaactt 108329
to top
>emb|CR932980.12| Zebrafish DNA sequence from clone DKEY-81L13 in linkage group 5,
             complete sequence
          Length = 253220

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 55563 ttctttgctttcatgaactt 55582
to top
>emb|AL603715.7| Zebrafish DNA sequence from clone BUSM1-248F2 Contains part of a  novel
             gene similar to CNTFR alpha (ciliary neurotrophic factor
             receptor alpha precursor), complete sequence
          Length = 93772

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ttctttgctttcatgaactt 125
             ||||||||||||||||||||
Sbjct: 17483 ttctttgctttcatgaactt 17502
to top
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial
              variable region, strain 129/Sv
          Length = 1382053

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    tgttcatcacattgtcctcc 339
              ||||||||||||||||||||
Sbjct: 879430 tgttcatcacattgtcctcc 879411


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,894,304
Number of Sequences: 3902068
Number of extensions: 2894304
Number of successful extensions: 54552
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54397
Number of HSP's gapped (non-prelim): 155
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top