ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4... 76 1e-10
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
3dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
4dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
5dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
6gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8... 56 1e-04
7dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
8gb|AY108381.1| Zea mays PCO088244 mRNA sequence 56 1e-04
9gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone ... 56 1e-04
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
12dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
13dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
14dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
15dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
16dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
17dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
18dbj|AK073836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
19dbj|AK067218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
20gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone ... 44 0.42
21ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 42 1.7
22ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate ... 42 1.7
23gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds 42 1.7
24emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate ... 42 1.7
25gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, com... 42 1.7
26gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28... 42 1.7
27gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete s... 42 1.7
28gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate re... 42 1.7
29dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a prot... 42 1.7
30emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chro... 42 1.7
31gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7... 40 6.6
32gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 6.6
33ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant... 40 6.6
34gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosom... 40 6.6
35emb|AL121770.1|SPAC821 S.pombe chromosome I cosmid c821 40 6.6
36dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 6.6
37emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, com... 40 6.6
38gb|AE005923.1| Caulobacter crescentus CB15 section 249 of 359 of... 40 6.6
39emb|BX934911.1| Gallus gallus finished cDNA, clone ChEST150h3 40 6.6
40emb|AL845323.18| Mouse DNA sequence from clone RP23-304D11 on ch... 40 6.6
41dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
42dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
43gb|AF099188.1|AF099188 Caulobacter crescentus cell division prot... 40 6.6
44gb|AY106967.1| Zea mays PCO088243 mRNA sequence 40 6.6
45gb|AF009512.1|AF009512 Schizosaccharomyces pombe protein kinase ... 40 6.6
46gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complet... 40 6.6
47emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chro... 40 6.6 
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds
          Length = 1833

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                              
Query: 395  cgggtcggagtcgtggcagtccatgtagtccatgaagggcgagaggcgga 444
            ||||||||||||||||||||||||||||||  ||||||| ||||||||||
Sbjct: 1392 cgggtcggagtcgtggcagtccatgtagtcagtgaagggggagaggcgga 1343
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                              
Query: 395      cgggtcggagtcgtggcagtccatgtagtc 424
                ||||||||||||||||||||||||||||||
Sbjct: 15167683 cgggtcggagtcgtggcagtccatgtagtc 15167712



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                            
Query: 131      cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 190
                ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 15167404 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 15167463

                                                             
Query: 191      ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 235
                 ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 15167464 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 15167508
to top
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0043B10
          Length = 167399

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                            
Query: 395    cgggtcggagtcgtggcagtccatgtagtc 424
              ||||||||||||||||||||||||||||||
Sbjct: 139649 cgggtcggagtcgtggcagtccatgtagtc 139678



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                          
Query: 131    cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 190
              ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 139370 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 139429

                                                           
Query: 191    ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 235
               ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 139430 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 139474
to top
>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0493G01
          Length = 167587

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                           
Query: 395   cgggtcggagtcgtggcagtccatgtagtc 424
             ||||||||||||||||||||||||||||||
Sbjct: 21056 cgggtcggagtcgtggcagtccatgtagtc 21085



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                         
Query: 131   cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 190
             ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 20777 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 20836

                                                          
Query: 191   ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 235
              ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 20837 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 20881
to top
>dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N02, full
            insert sequence
          Length = 2710

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                          
Query: 395  cgggtcggagtcgtggcagtccatgtagtc 424
            ||||||||||||||||||||||||||||||
Sbjct: 2174 cgggtcggagtcgtggcagtccatgtagtc 2145



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                        
Query: 131  cctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgaggtcggcgta 190
            ||||| ||||||||||||||| |||||||| ||||||||  | |  || |||||||||||
Sbjct: 2453 cctctccggcaggtcagggttggccaggaacagccgcccgtacgccaccaggtcggcgta 2394

                                                         
Query: 191  ccccgaggagaccgccttgtccccctcttcccgatcatacccacc 235
             ||   || |||||||||||| || || ||||| || ||||||||
Sbjct: 2393 gccgtcggcgaccgccttgtcgccttcgtcccggtcgtacccacc 2349
to top
>gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8) mRNA, complete cds
          Length = 1529

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 45   aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 92
            ||||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 1269 aacgggtagtccgtgtaaccaacgacgggatccggggtgtagaacgtc 1222
to top
>dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H07, full
            insert sequence
          Length = 1360

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 45   aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 92
            ||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 1150 aacgggtagtcggtgtagccggcgacggggtcggcggtgtagaacgtc 1103



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 372 gccatgtggaggccgagcgcgtgcgggtcggagtcg 407
           |||||||||  | ||||||||| |||||||||||||
Sbjct: 802 gccatgtgggcggcgagcgcgtccgggtcggagtcg 767
to top
>gb|AY108381.1| Zea mays PCO088244 mRNA sequence
          Length = 694

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 45  aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 92
           ||||||||||| |||||||| ||||||||||| | | |||||||||||
Sbjct: 434 aacgggtagtccgtgtaaccaacgacgggatccggggtgtagaacgtc 387
to top
>gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBa0043H01, from
             chromosome 4, complete sequence
          Length = 15426

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 45    aacgggtagtcggtgtaaccgacgacgggatcggagatgtagaacgtc 92
             ||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 12779 aacgggtagtcggtgtagccggcgacggggtcggcggtgtagaacgtc 12826



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 372   gccatgtggaggccgagcgcgtgcgggtcggagtcg 407
             |||||||||  | ||||||||| |||||||||||||
Sbjct: 13127 gccatgtgggcggcgagcgcgtccgggtcggagtcg 13162
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                         
Query: 395     cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 436
               |||||||||||||  ||||||||||||||||| ||| |||||
Sbjct: 5890004 cgggtcggagtcgacgcagtccatgtagtccaggaacggcga 5890045



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                           
Query: 395     cgggtcggagtcgtggcagtccatgtagtccatgaagggcgagaggcggatgcccacacg 454
               |||||||||||||  |||||||||| |||||| ||| ||||| || | |||||| || ||
Sbjct: 5895993 cgggtcggagtcgacgcagtccatgaagtccaggaacggcgacagcctgatgccgacgcg 5896052

                        
Query: 455     atgggcgcc 463
                ||||||||
Sbjct: 5896053 gtgggcgcc 5896061



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                           
Query: 122     gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 181
               |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 5889728 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 5889787

                                                                  
Query: 182     gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 232
               |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 5889788 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 5889838



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 395     cgggtcggagtcgtggcagtccatgtagtccatgaa 430
               |||||||||||||  ||||||||| ||||| |||||
Sbjct: 5906210 cgggtcggagtcgacgcagtccatatagtcgatgaa 5906245
to top
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0024N18
          Length = 128739

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 395   cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 436
             |||||||||||||  ||||||||||||||||| ||| |||||
Sbjct: 11656 cgggtcggagtcgacgcagtccatgtagtccaggaacggcga 11697



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                         
Query: 395   cgggtcggagtcgtggcagtccatgtagtccatgaagggcgagaggcggatgcccacacg 454
             |||||||||||||  |||||||||| |||||| ||| ||||| || | |||||| || ||
Sbjct: 17645 cgggtcggagtcgacgcagtccatgaagtccaggaacggcgacagcctgatgccgacgcg 17704

                      
Query: 455   atgggcgcc 463
              ||||||||
Sbjct: 17705 gtgggcgcc 17713



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 122   gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 181
             |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 11380 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 11439

                                                                
Query: 182   gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 232
             |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 11440 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 11490



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 395   cgggtcggagtcgtggcagtccatgtagtccatgaa 430
             |||||||||||||  ||||||||| ||||| |||||
Sbjct: 27862 cgggtcggagtcgacgcagtccatatagtcgatgaa 27897
to top
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0537F07
          Length = 147724

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 395   cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 436
             |||||||||||||  ||||||||||||||||| ||| |||||
Sbjct: 90779 cgggtcggagtcgacgcagtccatgtagtccaggaacggcga 90820



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                         
Query: 395   cgggtcggagtcgtggcagtccatgtagtccatgaagggcgagaggcggatgcccacacg 454
             |||||||||||||  |||||||||| |||||| ||| ||||| || | |||||| || ||
Sbjct: 96768 cgggtcggagtcgacgcagtccatgaagtccaggaacggcgacagcctgatgccgacgcg 96827

                      
Query: 455   atgggcgcc 463
              ||||||||
Sbjct: 96828 gtgggcgcc 96836



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 122   gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 181
             |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 90503 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 90562

                                                                
Query: 182   gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 232
             |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 90563 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 90613



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 395    cgggtcggagtcgtggcagtccatgtagtccatgaa 430
              |||||||||||||  ||||||||| ||||| |||||
Sbjct: 106985 cgggtcggagtcgacgcagtccatatagtcgatgaa 107020
to top
>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full
           insert sequence
          Length = 1517

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 395 cgggtcggagtcgtggcagtccatgtagtccatgaagggcga 436
           |||||||||||||  ||||||||||||||||| ||| |||||
Sbjct: 904 cgggtcggagtcgacgcagtccatgtagtccaggaacggcga 863



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 89/111 (80%)
 Strand = Plus / Minus

                                                                        
Query: 122  gagctctagcctcttcggcaggtcagggtttgccaggaagagccgcccaaaagagacgag 181
            |||||| | |||||| ||||| ||||| || |||| |||||||| |||| | | ||||||
Sbjct: 1180 gagctcgaacctcttgggcagatcaggattcgccaagaagagcctcccataggcgacgag 1121

                                                               
Query: 182  gtcggcgtaccccgaggagaccgccttgtccccctcttcccgatcataccc 232
            |||||| || ||   ||  |||||||||| ||| |||||||| || |||||
Sbjct: 1120 gtcggcatagccatcggcaaccgccttgttcccttcttcccggtcgtaccc 1070
to top
>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full
           insert sequence
          Length = 1281

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 395 cgggtcggagtcgtggcagtccatgtagtccatgaagggcgagaggcggatgcccacacg 454
           |||||||||||||  |||||||||| |||||| ||| ||||| || | |||||| || ||
Sbjct: 826 cgggtcggagtcgacgcagtccatgaagtccaggaacggcgacagcctgatgccgacgcg 767

                    
Query: 455 atgggcgcc 463
            ||||||||
Sbjct: 766 gtgggcgcc 758
to top
>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full
           insert sequence
          Length = 1281

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 395 cgggtcggagtcgtggcagtccatgtagtccatgaagggcgagaggcggatgcccacacg 454
           |||||||||||||  |||||||||| |||||| ||| ||||| || | |||||| || ||
Sbjct: 826 cgggtcggagtcgacgcagtccatgaagtccaggaacggcgacagcctgatgccgacgcg 767

                    
Query: 455 atgggcgcc 463
            ||||||||
Sbjct: 766 gtgggcgcc 758
to top
>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full
           insert sequence
          Length = 1422

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 395 cgggtcggagtcgtggcagtccatgtagtccatgaagggcgagaggcggatgcccacacg 454
           |||||||||||||  |||||||||| |||||| ||| ||||| || | |||||| || ||
Sbjct: 821 cgggtcggagtcgacgcagtccatgaagtccaggaacggcgacagcctgatgccgacgcg 762

                    
Query: 455 atgggcgcc 463
            ||||||||
Sbjct: 761 gtgggcgcc 753
to top
>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full
           insert sequence
          Length = 1434

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 395 cgggtcggagtcgtggcagtccatgtagtccatgaagggcgagaggcggatgcccacacg 454
           |||||||||||||  |||||||||| |||||| ||| ||||| || | |||||| || ||
Sbjct: 826 cgggtcggagtcgacgcagtccatgaagtccaggaacggcgacagcctgatgccgacgcg 767

                    
Query: 455 atgggcgcc 463
            ||||||||
Sbjct: 766 gtgggcgcc 758
to top
>dbj|AK073836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H04, full
            insert sequence
          Length = 2314

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 131  cctcttcggcaggtcagggtttgccaggaa 160
            |||| ||||||||||||| |||||||||||
Sbjct: 1981 cctcctcggcaggtcaggatttgccaggaa 1952
to top
>dbj|AK067218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098J23, full
            insert sequence
          Length = 2420

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 131  cctcttcggcaggtcagggtttgccaggaa 160
            |||| ||||||||||||| |||||||||||
Sbjct: 2087 cctcctcggcaggtcaggatttgccaggaa 2058
to top
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from
            chromosome 4, complete sequence
          Length = 90825

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 131  cctcttcggcaggtcagggtttgccaggaa 160
            |||| ||||||||||||| |||||||||||
Sbjct: 3632 cctcctcggcaggtcaggatttgccaggaa 3661
to top
>ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.2 mRNA, complete cds
          Length = 1460

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 48   gggtagtcggtgtaaccgacgacgggatc 76
            ||||| ||||||||||||||||| |||||
Sbjct: 1242 gggtaatcggtgtaaccgacgactggatc 1214
to top
>ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680
            (OPR1) transcript variant AT1G76680.1 mRNA, complete cds
          Length = 1451

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 48   gggtagtcggtgtaaccgacgacgggatc 76
            ||||| ||||||||||||||||| |||||
Sbjct: 1233 gggtaatcggtgtaaccgacgactggatc 1205
to top
>gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds
          Length = 1119

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 48   gggtagtcggtgtaaccgacgacgggatc 76
            ||||| ||||||||||||||||| |||||
Sbjct: 1097 gggtaatcggtgtaaccgacgactggatc 1069
to top
>emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate reductase
          Length = 1311

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 48   gggtagtcggtgtaaccgacgacgggatc 76
            ||||| ||||||||||||||||| |||||
Sbjct: 1162 gggtaatcggtgtaaccgacgactggatc 1134
to top
>gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, complete cds
          Length = 1252

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 48   gggtagtcggtgtaaccgacgacgggatc 76
            ||||| ||||||||||||||||| |||||
Sbjct: 1167 gggtaatcggtgtaaccgacgactggatc 1139
to top
>gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28O16 genomic sequence, complete
             sequence
          Length = 87684

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 48    gggtagtcggtgtaaccgacgacgggatc 76
             ||||| ||||||||||||||||| |||||
Sbjct: 15021 gggtaatcggtgtaaccgacgactggatc 14993
to top
>gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete sequence
          Length = 1280

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 48   gggtagtcggtgtaaccgacgacgggatc 76
            ||||| ||||||||||||||||| |||||
Sbjct: 1167 gggtaatcggtgtaaccgacgactggatc 1139
to top
>gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate reductase OPR1 and
            12-oxophytodienoate reductase OPR2 genes, complete cds
          Length = 7079

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 48   gggtagtcggtgtaaccgacgacgggatc 76
            ||||| ||||||||||||||||| |||||
Sbjct: 4615 gggtaatcggtgtaaccgacgactggatc 4587
to top
>dbj|AB030705.1| Lithospermum erythrorhizon mRNA for LEDI-5a protein, complete cds
          Length = 1454

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 41   aagaaacgggtagtcggtgtaaccgacgacggg 73
            |||||| |||||||||||||| ||||| |||||
Sbjct: 1139 aagaaatgggtagtcggtgtagccgacaacggg 1107
to top
>emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chromosome 15, complete
             sequence
          Length = 149807

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   caggtcagggtttgccaggaa 160
             |||||||||||||||||||||
Sbjct: 70558 caggtcagggtttgccaggaa 70578
to top
>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds
          Length = 1594

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 50   gtagtcggtgtaaccgacgacggg 73
            |||||| |||||||||||||||||
Sbjct: 1400 gtagtccgtgtaaccgacgacggg 1377
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    gggcagcagcctgtgcggca 291
              ||||||||||||||||||||
Sbjct: 983671 gggcagcagcctgtgcggca 983690
to top
>ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant protein
           (Afu4g13830) partial mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 239 tgcaatgaaggtgcccttgaaggc 262
           |||||||||||||||| |||||||
Sbjct: 264 tgcaatgaaggtgcccatgaaggc 241
to top
>gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosome 7, complete sequence
          Length = 199810

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    tggttcaatgacacatcaag 39
             ||||||||||||||||||||
Sbjct: 70383 tggttcaatgacacatcaag 70364
to top
>emb|AL121770.1|SPAC821 S.pombe chromosome I cosmid c821
          Length = 35452

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    catcctgttgtacttattaa 111
             ||||||||||||||||||||
Sbjct: 33192 catcctgttgtacttattaa 33173
to top
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 202     ccgccttgtccccctcttcc 221
               ||||||||||||||||||||
Sbjct: 4004811 ccgccttgtccccctcttcc 4004830
to top
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence
          Length = 197615

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 427 tgaagggcgagaggcggatg 446
           ||||||||||||||||||||
Sbjct: 574 tgaagggcgagaggcggatg 555
to top
>gb|AE005923.1| Caulobacter crescentus CB15 section 249 of 359 of the complete genome
          Length = 6158

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 355  ggtcattgagcttcgtggccatgtggaggccg 386
            |||||||||||||| ||||| ||| |||||||
Sbjct: 4657 ggtcattgagcttcatggccttgtagaggccg 4688
to top
>emb|BX934911.1| Gallus gallus finished cDNA, clone ChEST150h3
          Length = 1240

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 gcggcaccacccgccggccg 305
           ||||||||||||||||||||
Sbjct: 72  gcggcaccacccgccggccg 53
to top
>emb|AL845323.18| Mouse DNA sequence from clone RP23-304D11 on chromosome 2, complete
             sequence
          Length = 228137

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   ctgtagggcagcagcctgtg 286
             ||||||||||||||||||||
Sbjct: 68961 ctgtagggcagcagcctgtg 68980
to top
>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full
           insert sequence
          Length = 1311

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 395 cgggtcggagtcgtggcagtccatgtagtccatgaa 430
           |||||||||||||  ||||||||| ||||| |||||
Sbjct: 829 cgggtcggagtcgacgcagtccatatagtcgatgaa 794
to top
>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full
           insert sequence
          Length = 1295

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 395 cgggtcggagtcgtggcagtccatgtagtccatgaa 430
           |||||||||||||  ||||||||| ||||| |||||
Sbjct: 812 cgggtcggagtcgacgcagtccatatagtcgatgaa 777
to top
>gb|AF099188.1|AF099188 Caulobacter crescentus cell division protein DivB (divB) gene,
            complete cds; and MurG (murG) gene, partial cds
          Length = 2475

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 355  ggtcattgagcttcgtggccatgtggaggccg 386
            |||||||||||||| ||||| ||| |||||||
Sbjct: 1301 ggtcattgagcttcatggccttgtagaggccg 1270
to top
>gb|AY106967.1| Zea mays PCO088243 mRNA sequence
          Length = 765

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 50  gtagtcggtgtaaccgacgacggg 73
           |||||| |||||||||||||||||
Sbjct: 571 gtagtccgtgtaaccgacgacggg 548
to top
>gb|AF009512.1|AF009512 Schizosaccharomyces pombe protein kinase Orb6p (orb6) gene, complete
            cds
          Length = 2344

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   catcctgttgtacttattaa 111
            ||||||||||||||||||||
Sbjct: 2289 catcctgttgtacttattaa 2270
to top
>gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complete sequence
          Length = 190414

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     tggttcaatgacacatcaag 39
              ||||||||||||||||||||
Sbjct: 156206 tggttcaatgacacatcaag 156187
to top
>emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chromosome 4, complete
              sequence
          Length = 186686

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    atgaaggtgcccttgaaggc 262
              ||||||||||||||||||||
Sbjct: 183740 atgaaggtgcccttgaaggc 183721


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,153,615
Number of Sequences: 3902068
Number of extensions: 3153615
Number of successful extensions: 58430
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58199
Number of HSP's gapped (non-prelim): 219
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top