ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart08a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016304.1| Zea mays clone Contig137 mRNA sequence 68 3e-08
2gb|AY343976.1| Brachypodium sylvaticum fascilin-like gene, parti... 62 2e-06
3ref|XM_483207.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
4gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full... 54 4e-04
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
6dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
7dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
8dbj|AK106964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
9gb|AY108316.1| Zea mays PCO143640 mRNA sequence 52 0.002
10gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
11gb|AY109752.1| Zea mays CL893_1 mRNA sequence 50 0.006
12gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 44 0.37
13gb|AC122898.4| Mus musculus BAC clone RP23-71K9 from 1, complete... 44 0.37
14dbj|AK048630.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 44 0.37
15gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complet... 44 0.37
16ref|NM_197743.1| Oryza sativa (japonica cultivar-group) putative... 42 1.5
17gb|AC005081.3| Homo sapiens BAC clone CTA-270D13 from 7, complet... 42 1.5
18emb|AL450309.14| Human DNA sequence from clone RP11-478H16 on ch... 42 1.5
19gb|AC022068.6| Homo sapiens chromosome 8, clone RP11-523C15, com... 42 1.5
20gb|DQ113909.1| Hordeum vulgare subsp. vulgare cultivar Morex ind... 42 1.5
21gb|DQ113908.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo i... 42 1.5
22gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 42 1.5
23gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 gen... 42 1.5
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.5
26gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin ... 42 1.5
27dbj|AK071526.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
28gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
29ref|NM_195381.1| Oryza sativa (japonica cultivar-group) hypothet... 40 5.8
30gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.8
31gb|AC166995.2| Mus musculus BAC clone RP23-255N15 from chromosom... 40 5.8
32gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic... 40 5.8
33gb|AC129186.3| Mus musculus BAC clone RP23-415I21 from chromosom... 40 5.8
34gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
35gb|AC099042.9| Oryza sativa chromosome 10 BAC OSJNBa0041L14 geno... 40 5.8
36gb|AE005941.1| Caulobacter crescentus CB15 section 267 of 359 of... 40 5.8
37gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.8
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
39gb|AC024153.22| Homo sapiens 12 BAC RP13-359K18 (Roswell Park Ca... 40 5.8
40gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, r... 40 5.8
41gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.8
42dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
43dbj|AK068249.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
44gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55... 40 5.8
45gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 5.8
46emb|AL953879.7| Zebrafish DNA sequence from clone CH211-151G18, ... 40 5.8
47emb|CR759836.11| Zebrafish DNA sequence from clone CH211-254B14 ... 40 5.8
48emb|AL808123.9| Mouse DNA sequence from clone RP23-73K21 on chro... 40 5.8 
>gb|BT016304.1| Zea mays clone Contig137 mRNA sequence
          Length = 1191

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 379 gccagcggcgggtcgctcttgaagatctgcatcggcag 416
           |||||||| |||||||||||||||||||||||||||||
Sbjct: 699 gccagcggggggtcgctcttgaagatctgcatcggcag 662
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>gb|AY343976.1| Brachypodium sylvaticum fascilin-like gene, partial sequence
          Length = 842

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 361 gcgggcgcgggagccggggccagcggcgggtcgctcttgaagatctgcatcggcagcagc 420
           ||||||||||| ||||| || |||||||||||  |  ||||||||||||||||||| |||
Sbjct: 681 gcgggcgcgggcgccggcgcgagcggcgggtccttggtgaagatctgcatcggcaggagc 622

                  
Query: 421 actttgt 427
           || ||||
Sbjct: 621 accttgt 615
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>ref|XM_483207.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1078

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 385 ggcgggtcgctcttgaagatctgcatcggcagcagcactttgtccacctcg 435
           ||||||||| || |||||||||||||||| || |||||  |||||||||||
Sbjct: 679 ggcgggtcggtcctgaagatctgcatcgggaggagcaccctgtccacctcg 629
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>gb|BT008953.1| Triticum aestivum clone wdk1c.pk010.j17:fis, full insert mRNA
           sequence
          Length = 954

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 361 gcgggcgcgggagccggggccagcggcgggtcgctcttgaagatctgcatcggcagcagc 420
           ||||||||||| ||||| ||||||||||||||  |  |||||| |||||| ||||| |||
Sbjct: 669 gcgggcgcgggcgccggcgccagcggcgggtccttgctgaagagctgcatgggcaggagc 610

                  
Query: 421 actttgt 427
           || ||||
Sbjct: 609 accttgt 603
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 385      ggcgggtcgctcttgaagatctgcatcggcagcagcactttgtccacctcg 435
                ||||||||| || |||||||||||||||| || |||||  |||||||||||
Sbjct: 24811538 ggcgggtcggtcctgaagatctgcatcgggaggagcaccctgtccacctcg 24811588
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>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1345_D02
          Length = 159613

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 385    ggcgggtcgctcttgaagatctgcatcggcagcagcactttgtccacctcg 435
              ||||||||| || |||||||||||||||| || |||||  |||||||||||
Sbjct: 112339 ggcgggtcggtcctgaagatctgcatcgggaggagcaccctgtccacctcg 112389
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>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1506_F01
          Length = 121202

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 385   ggcgggtcgctcttgaagatctgcatcggcagcagcactttgtccacctcg 435
             ||||||||| || |||||||||||||||| || |||||  |||||||||||
Sbjct: 15984 ggcgggtcggtcctgaagatctgcatcgggaggagcaccctgtccacctcg 16034
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>dbj|AK106964.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-F09, full
           insert sequence
          Length = 1077

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 385 ggcgggtcgctcttgaagatctgcatcggcagcagcactttgtccacctcg 435
           ||||||||| || |||||||||||||||| || |||||  |||||||||||
Sbjct: 679 ggcgggtcggtcctgaagatctgcatcgggaggagcaccctgtccacctcg 629
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>gb|AY108316.1| Zea mays PCO143640 mRNA sequence
          Length = 474

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 358 ggggcgggcgcgggagccggggccagcggcgggtcgctcttgaagatctgcatcggcagc 417
           ||||||||||||||  |||| ||||||||||||||  |  |||||| |||||| ||||| 
Sbjct: 293 ggggcgggcgcgggcaccggcgccagcggcgggtccttgctgaagagctgcatgggcagg 234

                     
Query: 418 agcactttgt 427
           ||||| ||||
Sbjct: 233 agcaccttgt 224
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>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 367   gcgggagccggggccagcggcgggtcgctcttgaagatctgcatcggcagcagcactttg 426
             ||||| ||||| ||||||||||||||  |  ||||||||||||| ||||| ||||| |||
Sbjct: 85029 gcgggcgccggcgccagcggcgggtccttgctgaagatctgcatgggcaggagcaccttg 85088

              
Query: 427   t 427
             |
Sbjct: 85089 t 85089
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>gb|AY109752.1| Zea mays CL893_1 mRNA sequence
          Length = 1101

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 392 cgctcttgaagatctgcatcggcag 416
           |||||||||||||||||||||||||
Sbjct: 720 cgctcttgaagatctgcatcggcag 696
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 234    caggtaactggcgacaccgacg 255
              ||||||||||||||||||||||
Sbjct: 764998 caggtaactggcgacaccgacg 764977
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>gb|AC122898.4| Mus musculus BAC clone RP23-71K9 from 1, complete sequence
          Length = 230945

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 206   tcatcaggccacctgagacggc 227
             ||||||||||||||||||||||
Sbjct: 39226 tcatcaggccacctgagacggc 39205
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>dbj|AK048630.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130090G24 product:unclassifiable, full
            insert sequence
          Length = 1543

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 206  tcatcaggccacctgagacggc 227
            ||||||||||||||||||||||
Sbjct: 1087 tcatcaggccacctgagacggc 1066
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>gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complete sequence
          Length = 236382

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 206   tcatcaggccacctgagacggc 227
             ||||||||||||||||||||||
Sbjct: 67290 tcatcaggccacctgagacggc 67311
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>ref|NM_197743.1| Oryza sativa (japonica cultivar-group) putative
           8-amino-7-oxononanoate synthase (OSJNBb0089A17.1), mRNA
          Length = 1376

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 258 ggcgcagtgggacgcgctcttggac 282
           ||||||||||||||||||| |||||
Sbjct: 3   ggcgcagtgggacgcgctcgtggac 27
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>gb|AC005081.3| Homo sapiens BAC clone CTA-270D13 from 7, complete sequence
          Length = 180290

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 358   ggggcgggcgcgggagccggggccagcggcggg 390
             |||||||||||||||| ||||||| | ||||||
Sbjct: 84201 ggggcgggcgcgggaggcggggcctggggcggg 84233
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>emb|AL450309.14| Human DNA sequence from clone RP11-478H16 on chromosome 1 Contains the
             5' end of the ERO1LB gene for ERO1-like beta (S.
             cerevisiae), an  FK506 binding protein 3, 25kDa (FKBP3)
             pseudogene, the 5' UTR of a variant of the EDARADD gene
             for EDAR-associated death domain and three CpG islands,
             complete sequence
          Length = 166647

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   catcatcaggccacctgagac 224
             |||||||||||||||||||||
Sbjct: 54298 catcatcaggccacctgagac 54318
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>gb|AC022068.6| Homo sapiens chromosome 8, clone RP11-523C15, complete sequence
          Length = 202043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 404    tctgcatcggcagcagcactt 424
              |||||||||||||||||||||
Sbjct: 103519 tctgcatcggcagcagcactt 103539
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>gb|DQ113909.1| Hordeum vulgare subsp. vulgare cultivar Morex inducer of CBF
           expression 2 (ICE2) gene, partial cds
          Length = 2512

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 110 cagcaacaatccatgtagtaa 130
           |||||||||||||||||||||
Sbjct: 384 cagcaacaatccatgtagtaa 364
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>gb|DQ113908.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo inducer of CBF
           expression 2 (ICE2) gene, partial cds
          Length = 2512

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 110 cagcaacaatccatgtagtaa 130
           |||||||||||||||||||||
Sbjct: 384 cagcaacaatccatgtagtaa 364
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>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
             sequence
          Length = 144191

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 258   ggcgcagtgggacgcgctcttggac 282
             ||||||||||||||||||| |||||
Sbjct: 24021 ggcgcagtgggacgcgctcgtggac 23997
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>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete
             sequence
          Length = 132927

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 258   ggcgcagtgggacgcgctcttggac 282
             ||||||||||||||||||| |||||
Sbjct: 17940 ggcgcagtgggacgcgctcgtggac 17964
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 258      ggcgcagtgggacgcgctcttggac 282
                ||||||||||||||||||| |||||
Sbjct: 21586036 ggcgcagtgggacgcgctcgtggac 21586060



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 356     cgggggcgggcgcgggagccggggccag 383
               ||||||| | ||||||||||||||||||
Sbjct: 6518050 cgggggcagccgcgggagccggggccag 6518023
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 359     gggcgggcgcgggagccgggg 379
               |||||||||||||||||||||
Sbjct: 8349430 gggcgggcgcgggagccgggg 8349450
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>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster,
             complete sequence
          Length = 123580

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   ggcgtcgtcgggggcgggcgc 368
             |||||||||||||||||||||
Sbjct: 44127 ggcgtcgtcgggggcgggcgc 44107
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>dbj|AK071526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099J24, full
           insert sequence
          Length = 1794

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 258 ggcgcagtgggacgcgctcttggac 282
           ||||||||||||||||||| |||||
Sbjct: 247 ggcgcagtgggacgcgctcgtggac 271
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 258      ggcgcagtgggacgcgctcttggac 282
                ||||||||||||||||||| |||||
Sbjct: 21597699 ggcgcagtgggacgcgctcgtggac 21597723



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 356     cgggggcgggcgcgggagccggggccag 383
               ||||||| | ||||||||||||||||||
Sbjct: 6520436 cgggggcagccgcgggagccggggccag 6520409
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>ref|NM_195381.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0041L14.18), mRNA
          Length = 489

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 356 cgggggcgggcgcgggagccggggccag 383
           ||||||| | ||||||||||||||||||
Sbjct: 66  cgggggcagccgcgggagccggggccag 39
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 294     cttctggctcgccggcttcc 313
               ||||||||||||||||||||
Sbjct: 2205398 cttctggctcgccggcttcc 2205417
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>gb|AC166995.2| Mus musculus BAC clone RP23-255N15 from chromosome 16, complete
             sequence
          Length = 170106

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    agtatattaagtagtatcaa 36
             ||||||||||||||||||||
Sbjct: 22438 agtatattaagtagtatcaa 22457
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>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster
          Length = 109528

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   cgccggcttccccgacgccg 322
             ||||||||||||||||||||
Sbjct: 12953 cgccggcttccccgacgccg 12972
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>gb|AC129186.3| Mus musculus BAC clone RP23-415I21 from chromosome 16, complete sequence
          Length = 209432

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     agtatattaagtagtatcaa 36
              ||||||||||||||||||||
Sbjct: 201504 agtatattaagtagtatcaa 201523
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>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030C11, complete sequence
          Length = 156647

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   cttctggctcgccggcttcc 313
             ||||||||||||||||||||
Sbjct: 95692 cttctggctcgccggcttcc 95711
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>gb|AC099042.9| Oryza sativa chromosome 10 BAC OSJNBa0041L14 genomic sequence, complete
             sequence
          Length = 158742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 356   cgggggcgggcgcgggagccggggccag 383
             ||||||| | ||||||||||||||||||
Sbjct: 84130 cgggggcagccgcgggagccggggccag 84157
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>gb|AE005941.1| Caulobacter crescentus CB15 section 267 of 359 of the complete genome
          Length = 11811

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 267  ggacgcgctcttggaccctacctt 290
            |||||||||||||||||| |||||
Sbjct: 1292 ggacgcgctcttggacccgacctt 1269
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>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0081A17, from chromosome 3, complete sequence
          Length = 134821

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    cttctggctcgccggcttcc 313
              ||||||||||||||||||||
Sbjct: 120658 cttctggctcgccggcttcc 120639
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 294     cttctggctcgccggcttcc 313
               ||||||||||||||||||||
Sbjct: 2205410 cttctggctcgccggcttcc 2205429
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>gb|AC024153.22| Homo sapiens 12 BAC RP13-359K18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178905

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     aaagaatgaactcagcaaca 117
              ||||||||||||||||||||
Sbjct: 102750 aaagaatgaactcagcaaca 102731
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>gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, region 90A-90A, BAC clone
              BACR48C05, complete sequence
          Length = 164450

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 398    tgaagatctgcatcggcagcagca 421
              |||||||||||||| |||||||||
Sbjct: 113699 tgaagatctgcatccgcagcagca 113676
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 358   ggggcgggcgcgggagccggggcc 381
             |||||||||||||| |||||||||
Sbjct: 11969 ggggcgggcgcgggggccggggcc 11992
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>dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G12, full
            insert sequence
          Length = 1935

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  cttctggctcgccggcttcc 313
            ||||||||||||||||||||
Sbjct: 1417 cttctggctcgccggcttcc 1398
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>dbj|AK068249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146P20, full
           insert sequence
          Length = 2388

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 356 cgggggcgggcgcgggagccggggccag 383
           ||||||| | ||||||||||||||||||
Sbjct: 226 cgggggcagccgcgggagccggggccag 199
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>gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55 of 118 of the
             complete sequence
          Length = 217725

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 398   tgaagatctgcatcggcagcagca 421
             |||||||||||||| |||||||||
Sbjct: 95410 tgaagatctgcatccgcagcagca 95387
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 241     ctggcgacaccgacgccggc 260
               ||||||||||||||||||||
Sbjct: 3156145 ctggcgacaccgacgccggc 3156126
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>emb|AL953879.7| Zebrafish DNA sequence from clone CH211-151G18, complete sequence
          Length = 142739

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     cacaaataaagtagcagtat 21
             ||||||||||||||||||||
Sbjct: 25138 cacaaataaagtagcagtat 25119
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>emb|CR759836.11| Zebrafish DNA sequence from clone CH211-254B14 in linkage group 3,
             complete sequence
          Length = 168413

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     cacaaataaagtagcagtat 21
             ||||||||||||||||||||
Sbjct: 46854 cacaaataaagtagcagtat 46835
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>emb|AL808123.9| Mouse DNA sequence from clone RP23-73K21 on chromosome 2, complete
              sequence
          Length = 158637

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 347    tggcgtcgtcgggggcgggcgcgggagc 374
              ||||| || |||||||||||||||||||
Sbjct: 108445 tggcggcggcgggggcgggcgcgggagc 108472


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,132,082
Number of Sequences: 3902068
Number of extensions: 3132082
Number of successful extensions: 57462
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56921
Number of HSP's gapped (non-prelim): 541
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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