>DIOXL_ARATH (Q949R4) 4,5-DOPA dioxygenase extradiol-like protein|
          Length = 269

 Score =  123 bits (308), Expect = 3e-28
 Identities = 58/89 (65%), Positives = 68/89 (76%)
 Frame = -2

Query: 449 FAPTSGEPVPEWAAEFDAWLREALLNGRHDDVKRYEERAPFAKVAHPQPDHLYPLHVALG 270
           F  T G PVP WA EFD WLR++LL GR+ DV  +EE+AP AK+AHP P+HLYPLHV +G
Sbjct: 180 FNITDGSPVP-WALEFDHWLRDSLLQGRYGDVNEWEEKAPNAKMAHPWPEHLYPLHVVMG 238

Query: 269 AAGPDAKAELIHRSWSNATLSYASYRFTT 183
           AAG DAKAE IH SW   TLSY+SY FT+
Sbjct: 239 AAGGDAKAEQIHTSWQLGTLSYSSYSFTS 267

>DODA_PORGR (Q7XA48) 4,5-DOPA dioxygenase extradiol (EC 1.13.-.-)|
          Length = 271

 Score =  107 bits (266), Expect = 2e-23
 Identities = 48/82 (58%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
 Frame = -2

Query: 425 VPEWAAEFDAWLREALLNGRHDDVKRYEERAPFA-KVAHPQPDHLYPLHVALGAAGPDAK 249
           V  WAAEFD WL +ALL GR++DV  Y+ +AP   K+AHP P+H  PLHVA+GA G  +K
Sbjct: 189 VAPWAAEFDQWLEDALLEGRYEDVNNYQTKAPEGWKLAHPIPEHFLPLHVAMGAGGEKSK 248

Query: 248 AELIHRSWSNATLSYASYRFTT 183
           AELI+R+W + TL YASY+FT+
Sbjct: 249 AELIYRTWDHGTLGYASYKFTS 270

>GUNB_FUSOX (P46236) Putative endoglucanase type B precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 462

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +1

Query: 283 CSGYKWSGCGCATLANGALSSYRFTSSCRPLSKASLSQASNSAAHSGTGSPLVGAN 450
           C G  WSG  C T  N  +    F S C+P S    S A+  ++ + T +   G +
Sbjct: 33  CGGQNWSGTPCCTSGNKCVKLNDFYSQCQPGSAEPSSTAAGPSSTTATKTTATGGS 88

>TRMD_MYCMO (Q6KHL5) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 194

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 386 EALLNGRHDDVKRYEERAPFAKVAHPQPD 300
           E LLNG H ++K++ E+  + K    +PD
Sbjct: 157 EVLLNGNHKEIKQWREQKAYEKTLKNRPD 185

>TRBM_CANFA (Q5W7P8) Thrombomodulin precursor (TM) (CD141 antigen)|
          Length = 578

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 298 WSGCGCATLANGALSSYRFTSSCRPL 375
           W    CA  A+G L  + F +SCRPL
Sbjct: 153 WEEQRCAAEADGFLCEFHFAASCRPL 178

>GUX2_TRIRE (P07987) Exoglucanase 2 precursor (EC 3.2.1.91) (Exoglucanase II)|
           (Exocellobiohydrolase II) (CBHII)
           (1,4-beta-cellobiohydrolase)
          Length = 471

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 283 CSGYKWSGCGCATLANGALSSYRFTSSCRPLSKASLSQASNSAAHSGTGSP 435
           C G  WSG  C    +  + S  + S C P   AS S ++ +A+ +   SP
Sbjct: 34  CGGQNWSGPTCCASGSTCVYSNDYYSQCLP-GAASSSSSTRAASTTSRVSP 83

>TRBM_MOUSE (P15306) Thrombomodulin precursor (TM) (Fetomodulin) (CD141|
           antigen)
          Length = 577

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 298 WSGCGCATLANGALSSYRFTSSCRPLS 378
           W    C T   G L  + FT+SCRPL+
Sbjct: 151 WEEKPCETETQGFLCEFYFTASCRPLT 177

>G10A_ORYSA (Q94DE2) Protein G10 homolog 1|
          Length = 145

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 443 PTSGEPVPEWAAEFDAWLREALLNGRHDDVKRYEERAPFAKVAHPQPDHLYPLH 282
           P   E +     E DA +REA  N  HD  ++ E   P  +++H +  ++Y L+
Sbjct: 12  PGGWELIEPTIRELDAKMREAE-NDTHDGKRKCEALWPIFRISHQRSRYIYDLY 64

>SYH_BURPS (Q63UT2) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 446

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
 Frame = -2

Query: 374 NGRHDDVKRYEERAPFAKVAHPQPDHLYPLHV----ALGAAGPDAKAELI---HRSWSNA 216
           N  +D  KR     P  +   PQ       H     ALG AGPDA AE+I    R W + 
Sbjct: 103 NMLYDGPKRLWYLGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDL 162

Query: 215 TLS 207
            L+
Sbjct: 163 GLT 165

>SYH_BURMA (Q62JW5) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 446

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
 Frame = -2

Query: 374 NGRHDDVKRYEERAPFAKVAHPQPDHLYPLHV----ALGAAGPDAKAELI---HRSWSNA 216
           N  +D  KR     P  +   PQ       H     ALG AGPDA AE+I    R W + 
Sbjct: 103 NMLYDGPKRLWYLGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDL 162

Query: 215 TLS 207
            L+
Sbjct: 163 GLT 165

>CPSF2_XENLA (Q9W799) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 783

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 362 DDVKRYEERAPFAKVAHPQPDHLYPLHVALGAAG 261
           D VK+Y  +     ++HP P HL  L  A+G  G
Sbjct: 46  DSVKKYVHQVDAVLLSHPDPLHLGALPYAVGKLG 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,903,201
Number of Sequences: 219361
Number of extensions: 944107
Number of successful extensions: 3192
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3191
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)