Clone Name | rbart07g12 |
---|---|
Clone Library Name | barley_pub |
>PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein)| Length = 386 Score = 58.2 bits (139), Expect = 1e-08 Identities = 32/75 (42%), Positives = 49/75 (65%) Frame = -3 Query: 471 LRIQDDSLTGQTSSVDIATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEA 292 LR+Q+++LTG T+ +D A++ N + L+ +G++LL K+VS+ D T EEA Sbjct: 317 LRVQENALTGTTTELDDASEANMQLLVQVGEDLLKKSVSK-----------DNPETYEEA 365 Query: 291 LVRFAKRLSEERKLR 247 L RFAK LS+ +KLR Sbjct: 366 LKRFAKLLSDRKKLR 380
>PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) (Potato tuber| protein) Length = 386 Score = 58.2 bits (139), Expect = 1e-08 Identities = 33/75 (44%), Positives = 47/75 (62%) Frame = -3 Query: 471 LRIQDDSLTGQTSSVDIATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEA 292 LR+Q+++LTG T+ +D A++ N E L+ +G+ LL K VS+ D T EEA Sbjct: 317 LRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEA 365 Query: 291 LVRFAKRLSEERKLR 247 L RFAK LS+ +KLR Sbjct: 366 LKRFAKLLSDRKKLR 380
>PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein)| Length = 386 Score = 58.2 bits (139), Expect = 1e-08 Identities = 33/75 (44%), Positives = 47/75 (62%) Frame = -3 Query: 471 LRIQDDSLTGQTSSVDIATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEA 292 LR+Q+++LTG T+ +D A++ N E L+ +G+ LL K VS+ D T EEA Sbjct: 317 LRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEA 365 Query: 291 LVRFAKRLSEERKLR 247 L RFAK LS+ +KLR Sbjct: 366 LKRFAKLLSDRKKLR 380
>PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) (Fragment)| Length = 377 Score = 57.4 bits (137), Expect = 2e-08 Identities = 33/75 (44%), Positives = 46/75 (61%) Frame = -3 Query: 471 LRIQDDSLTGQTSSVDIATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEA 292 LR+Q+++LTG T+ +D A++ N E L+ +G+ LL K VS+ D T EEA Sbjct: 308 LRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEA 356 Query: 291 LVRFAKRLSEERKLR 247 L RFAK LS +KLR Sbjct: 357 LKRFAKLLSNRKKLR 371
>PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein)| Length = 386 Score = 56.2 bits (134), Expect = 4e-08 Identities = 32/75 (42%), Positives = 46/75 (61%) Frame = -3 Query: 471 LRIQDDSLTGQTSSVDIATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEA 292 LR+Q+++L G T+ +D A++ N E L+ +G+ LL K VS+ D T EEA Sbjct: 317 LRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEA 365 Query: 291 LVRFAKRLSEERKLR 247 L RFAK LS+ +KLR Sbjct: 366 LKRFAKLLSDRKKLR 380
>EDG5_RAT (P47752) Sphingosine 1-phosphate receptor Edg-5 (S1P receptor| Edg-5) (G-protein coupled receptor H218) (AGR16) (Endothelial differentiation G-protein coupled receptor 5) (Sphingosine 1-phosphate receptor 2) (S1P2) Length = 352 Score = 32.7 bits (73), Expect = 0.49 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = +2 Query: 260 SSESLLAKRTSASSLVPAPSTVSYIPLSMFTRDTVLVSRFLPIPISASLFSLVAISTE 433 +S+ L A++L+ P T+S PL F R+ S F I +SAS+FSL+AI+ E Sbjct: 77 ASDLLAGVAFVANTLLSGPVTLSLTPLQWFAREG---SAF--ITLSASVFSLLAIAIE 129
>EDG5_MOUSE (P52592) Sphingosine 1-phosphate receptor Edg-5 (S1P receptor| Edg-5) (Lysophospholipid receptor B2) (Endothelial differentiation G-protein coupled receptor 5) (Sphingosine 1-phosphate receptor 2) (S1P2) Length = 352 Score = 30.4 bits (67), Expect = 2.4 Identities = 22/58 (37%), Positives = 34/58 (58%) Frame = +2 Query: 260 SSESLLAKRTSASSLVPAPSTVSYIPLSMFTRDTVLVSRFLPIPISASLFSLVAISTE 433 +S+ L A++L+ T+S P+ F R+ VS F I +SAS+FSL+AI+ E Sbjct: 77 ASDLLAGVAFVANTLLSGHVTLSLTPVQWFARE---VSAF--ITLSASVFSLLAIAIE 129
>NUDH_BARBA (P35640) (Di)nucleoside polyphosphate hydrolase (EC 3.6.1.-) (Ap4A| pyrophosphatase) (Invasion protein A) (Invasion-associated locus protein A) Length = 170 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/58 (29%), Positives = 26/58 (44%) Frame = -3 Query: 408 NREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEALVRFAKRLSEERKLRQINL 235 NRE + IG+ L+T + + + G EE L + L EE +R +NL Sbjct: 22 NREGQVWIGRRLITSSHTYAEVSKLWQFPQGGIDEGEEPLDAARRELYEETGMRSVNL 79
>MET4_YEAST (P32389) Transcriptional activator of sulfur metabolism MET4| (Methionine-requiring protein 4) Length = 672 Score = 28.9 bits (63), Expect = 7.1 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = -3 Query: 387 IGKNLLTKTVSRVNIDNGMYETVDGAGTNEEALVRFAKRLS--EERKLRQINLNS 229 I ++L + RVN+ NG Y ++ AG + + + A ++ ++K+R+ N N+ Sbjct: 353 IPTSVLVTLLPRVNVPNGAYNSLISAGFDNDQIDAIAAIMAYHHQKKIRENNSNN 407
>GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation inhibitor 1| Length = 440 Score = 28.9 bits (63), Expect = 7.1 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = +1 Query: 256 ALLGEPLGEADERLFIGASTVDGLIHPIVNVYPGYGLGEQILTDPNKRLPVLFGG 420 A L +P E ER+ + AS++ +YP YGLGE L RL ++GG Sbjct: 195 AYLKKPARETRERILLYASSI-AKFGKSPYIYPLYGLGE--LPQGFARLSAIYGG 246
>PROA_LISMO (Q93Q55) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 415 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = -3 Query: 420 ATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEALVRFAKRLSEER 256 +TK+ AL+ + +LLT T S + +N GT E + R RL+EER Sbjct: 22 STKQKNAALLNLSNDLLTHTASLLEENNKDIIRAREKGTPETMIDRL--RLTEER 74
>PURL_SYNP7 (Q55041) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 777 Score = 28.5 bits (62), Expect = 9.2 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +1 Query: 250 QLALLGEPLGEADERLFIGASTVDGLIHPIVNVYPGYGLGEQILTDPNKRLPVLFGGDIH 429 +L LLG P AD+RL +G S + H V GL +I D +R+ + IH Sbjct: 600 RLYLLGLPTQAADDRLSLGGSEYLAIAHQTV-----AGLPPRIDFDLERRVQAVCRLGIH 654 Query: 430 RG 435 +G Sbjct: 655 QG 656
>PURL_SYNP6 (Q5N1Y6) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 777 Score = 28.5 bits (62), Expect = 9.2 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +1 Query: 250 QLALLGEPLGEADERLFIGASTVDGLIHPIVNVYPGYGLGEQILTDPNKRLPVLFGGDIH 429 +L LLG P AD+RL +G S + H V GL +I D +R+ + IH Sbjct: 600 RLYLLGLPTQAADDRLSLGGSEYLAIAHQTV-----AGLPPRIDFDLERRVQAVCRLGIH 654 Query: 430 RG 435 +G Sbjct: 655 QG 656
>TREY_ARTSQ (Q44315) Maltooligosyl trehalose synthase (EC 5.4.99.15)| ((1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase) Length = 775 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = +1 Query: 232 VEVDLAQLALLGEPLGEADERLFIGASTVDGLIHPIVNVYPGYGLGEQILTDPNKRLPVL 411 V+ ++ L L EP G ++ + A V + + +VY G ++ LTDP+ R P Sbjct: 582 VQAEVEALVELLEPYGASNS---LAAKLVQLTMPGVPDVYQGTEFWDRSLTDPDNRRPFS 638 Query: 412 F 414 F Sbjct: 639 F 639 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,068,245 Number of Sequences: 219361 Number of extensions: 1311161 Number of successful extensions: 4078 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3982 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4074 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)