ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart07g12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein) 58 1e-08
2PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) ... 58 1e-08
3PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein) 58 1e-08
4PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) ... 57 2e-08
5PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein) 56 4e-08
6EDG5_RAT (P47752) Sphingosine 1-phosphate receptor Edg-5 (S1P re... 33 0.49
7EDG5_MOUSE (P52592) Sphingosine 1-phosphate receptor Edg-5 (S1P ... 30 2.4
8NUDH_BARBA (P35640) (Di)nucleoside polyphosphate hydrolase (EC 3... 30 4.1
9MET4_YEAST (P32389) Transcriptional activator of sulfur metaboli... 29 7.1
10GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation ... 29 7.1
11PROA_LISMO (Q93Q55) Gamma-glutamyl phosphate reductase (GPR) (EC... 28 9.2
12PURL_SYNP7 (Q55041) Phosphoribosylformylglycinamidine synthase I... 28 9.2
13PURL_SYNP6 (Q5N1Y6) Phosphoribosylformylglycinamidine synthase I... 28 9.2
14TREY_ARTSQ (Q44315) Maltooligosyl trehalose synthase (EC 5.4.99.... 28 9.2

>PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein)|
          Length = 386

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 32/75 (42%), Positives = 49/75 (65%)
 Frame = -3

Query: 471 LRIQDDSLTGQTSSVDIATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEA 292
           LR+Q+++LTG T+ +D A++ N + L+ +G++LL K+VS+           D   T EEA
Sbjct: 317 LRVQENALTGTTTELDDASEANMQLLVQVGEDLLKKSVSK-----------DNPETYEEA 365

Query: 291 LVRFAKRLSEERKLR 247
           L RFAK LS+ +KLR
Sbjct: 366 LKRFAKLLSDRKKLR 380



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>PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) (Potato tuber|
           protein)
          Length = 386

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 33/75 (44%), Positives = 47/75 (62%)
 Frame = -3

Query: 471 LRIQDDSLTGQTSSVDIATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEA 292
           LR+Q+++LTG T+ +D A++ N E L+ +G+ LL K VS+           D   T EEA
Sbjct: 317 LRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEA 365

Query: 291 LVRFAKRLSEERKLR 247
           L RFAK LS+ +KLR
Sbjct: 366 LKRFAKLLSDRKKLR 380



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>PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein)|
          Length = 386

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 33/75 (44%), Positives = 47/75 (62%)
 Frame = -3

Query: 471 LRIQDDSLTGQTSSVDIATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEA 292
           LR+Q+++LTG T+ +D A++ N E L+ +G+ LL K VS+           D   T EEA
Sbjct: 317 LRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEA 365

Query: 291 LVRFAKRLSEERKLR 247
           L RFAK LS+ +KLR
Sbjct: 366 LKRFAKLLSDRKKLR 380



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>PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) (Fragment)|
          Length = 377

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 33/75 (44%), Positives = 46/75 (61%)
 Frame = -3

Query: 471 LRIQDDSLTGQTSSVDIATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEA 292
           LR+Q+++LTG T+ +D A++ N E L+ +G+ LL K VS+           D   T EEA
Sbjct: 308 LRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEA 356

Query: 291 LVRFAKRLSEERKLR 247
           L RFAK LS  +KLR
Sbjct: 357 LKRFAKLLSNRKKLR 371



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>PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein)|
          Length = 386

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 32/75 (42%), Positives = 46/75 (61%)
 Frame = -3

Query: 471 LRIQDDSLTGQTSSVDIATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEA 292
           LR+Q+++L G T+ +D A++ N E L+ +G+ LL K VS+           D   T EEA
Sbjct: 317 LRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEA 365

Query: 291 LVRFAKRLSEERKLR 247
           L RFAK LS+ +KLR
Sbjct: 366 LKRFAKLLSDRKKLR 380



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>EDG5_RAT (P47752) Sphingosine 1-phosphate receptor Edg-5 (S1P receptor|
           Edg-5) (G-protein coupled receptor H218) (AGR16)
           (Endothelial differentiation G-protein coupled receptor
           5) (Sphingosine 1-phosphate receptor 2) (S1P2)
          Length = 352

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = +2

Query: 260 SSESLLAKRTSASSLVPAPSTVSYIPLSMFTRDTVLVSRFLPIPISASLFSLVAISTE 433
           +S+ L      A++L+  P T+S  PL  F R+    S F  I +SAS+FSL+AI+ E
Sbjct: 77  ASDLLAGVAFVANTLLSGPVTLSLTPLQWFAREG---SAF--ITLSASVFSLLAIAIE 129



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>EDG5_MOUSE (P52592) Sphingosine 1-phosphate receptor Edg-5 (S1P receptor|
           Edg-5) (Lysophospholipid receptor B2) (Endothelial
           differentiation G-protein coupled receptor 5)
           (Sphingosine 1-phosphate receptor 2) (S1P2)
          Length = 352

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 22/58 (37%), Positives = 34/58 (58%)
 Frame = +2

Query: 260 SSESLLAKRTSASSLVPAPSTVSYIPLSMFTRDTVLVSRFLPIPISASLFSLVAISTE 433
           +S+ L      A++L+    T+S  P+  F R+   VS F  I +SAS+FSL+AI+ E
Sbjct: 77  ASDLLAGVAFVANTLLSGHVTLSLTPVQWFARE---VSAF--ITLSASVFSLLAIAIE 129



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>NUDH_BARBA (P35640) (Di)nucleoside polyphosphate hydrolase (EC 3.6.1.-) (Ap4A|
           pyrophosphatase) (Invasion protein A)
           (Invasion-associated locus protein A)
          Length = 170

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -3

Query: 408 NREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEALVRFAKRLSEERKLRQINL 235
           NRE  + IG+ L+T + +   +         G    EE L    + L EE  +R +NL
Sbjct: 22  NREGQVWIGRRLITSSHTYAEVSKLWQFPQGGIDEGEEPLDAARRELYEETGMRSVNL 79



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>MET4_YEAST (P32389) Transcriptional activator of sulfur metabolism MET4|
           (Methionine-requiring protein 4)
          Length = 672

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = -3

Query: 387 IGKNLLTKTVSRVNIDNGMYETVDGAGTNEEALVRFAKRLS--EERKLRQINLNS 229
           I  ++L   + RVN+ NG Y ++  AG + + +   A  ++   ++K+R+ N N+
Sbjct: 353 IPTSVLVTLLPRVNVPNGAYNSLISAGFDNDQIDAIAAIMAYHHQKKIRENNSNN 407



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>GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation inhibitor 1|
          Length = 440

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +1

Query: 256 ALLGEPLGEADERLFIGASTVDGLIHPIVNVYPGYGLGEQILTDPNKRLPVLFGG 420
           A L +P  E  ER+ + AS++         +YP YGLGE  L     RL  ++GG
Sbjct: 195 AYLKKPARETRERILLYASSI-AKFGKSPYIYPLYGLGE--LPQGFARLSAIYGG 246



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>PROA_LISMO (Q93Q55) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)|
           (Glutamate-5-semialdehyde dehydrogenase)
           (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
           dehydrogenase)
          Length = 415

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 420 ATKENREALIGIGKNLLTKTVSRVNIDNGMYETVDGAGTNEEALVRFAKRLSEER 256
           +TK+   AL+ +  +LLT T S +  +N         GT E  + R   RL+EER
Sbjct: 22  STKQKNAALLNLSNDLLTHTASLLEENNKDIIRAREKGTPETMIDRL--RLTEER 74



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>PURL_SYNP7 (Q55041) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 777

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = +1

Query: 250 QLALLGEPLGEADERLFIGASTVDGLIHPIVNVYPGYGLGEQILTDPNKRLPVLFGGDIH 429
           +L LLG P   AD+RL +G S    + H  V      GL  +I  D  +R+  +    IH
Sbjct: 600 RLYLLGLPTQAADDRLSLGGSEYLAIAHQTV-----AGLPPRIDFDLERRVQAVCRLGIH 654

Query: 430 RG 435
           +G
Sbjct: 655 QG 656



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>PURL_SYNP6 (Q5N1Y6) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 777

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = +1

Query: 250 QLALLGEPLGEADERLFIGASTVDGLIHPIVNVYPGYGLGEQILTDPNKRLPVLFGGDIH 429
           +L LLG P   AD+RL +G S    + H  V      GL  +I  D  +R+  +    IH
Sbjct: 600 RLYLLGLPTQAADDRLSLGGSEYLAIAHQTV-----AGLPPRIDFDLERRVQAVCRLGIH 654

Query: 430 RG 435
           +G
Sbjct: 655 QG 656



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>TREY_ARTSQ (Q44315) Maltooligosyl trehalose synthase (EC 5.4.99.15)|
           ((1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase)
          Length = 775

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 232 VEVDLAQLALLGEPLGEADERLFIGASTVDGLIHPIVNVYPGYGLGEQILTDPNKRLPVL 411
           V+ ++  L  L EP G ++    + A  V   +  + +VY G    ++ LTDP+ R P  
Sbjct: 582 VQAEVEALVELLEPYGASNS---LAAKLVQLTMPGVPDVYQGTEFWDRSLTDPDNRRPFS 638

Query: 412 F 414
           F
Sbjct: 639 F 639


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,068,245
Number of Sequences: 219361
Number of extensions: 1311161
Number of successful extensions: 4078
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4074
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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