No.
Definition
Score (bits)
E Value
1 gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
761
0.0
2 emb|AJ250663.2|HVU250663 Hordeum vulgare partial mRNA for putati...
599
e-168
3 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
100
7e-18
4 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
100
7e-18
5 emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123...
100
7e-18
6 gb|BT017006.1| Zea mays clone EK07D2310C10.c mRNA sequence
74
4e-10
7 dbj|AK058739.1| Oryza sativa (japonica cultivar-group) cDNA clon...
66
1e-07
8 gb|BT018918.1| Zea mays clone Contig12.F mRNA sequence
50
0.006
9 gb|AY549626.1| Zea perennis isolate per7b MPI (mpi) gene, comple...
50
0.006
10 gb|AY549625.1| Zea perennis isolate per7a MPI (mpi) gene, comple...
50
0.006
11 gb|AY549624.1| Zea perennis isolate per6 MPI (mpi) gene, complet...
50
0.006
12 gb|AY549623.1| Zea perennis isolate per4d MPI (mpi) gene, comple...
50
0.006
13 gb|AY549622.1| Zea perennis isolate per4c MPI (mpi) gene, comple...
50
0.006
14 gb|AY549621.1| Zea perennis isolate per4b MPI (mpi) gene, comple...
50
0.006
15 gb|AY549619.1| Zea perennis isolate per3c MPI (mpi) gene, comple...
50
0.006
16 gb|AY549618.1| Zea perennis isolate per3b MPI (mpi) gene, comple...
50
0.006
17 gb|AY549617.1| Zea perennis isolate per3a MPI (mpi) gene, comple...
50
0.006
18 gb|AY549616.1| Zea perennis isolate per2c MPI (mpi) gene, comple...
50
0.006
19 gb|AY549614.1| Zea perennis isolate per2a MPI (mpi) gene, comple...
50
0.006
20 gb|AY549612.1| Zea perennis isolate per1b MPI (mpi) gene, comple...
50
0.006
21 gb|AY549599.1| Zea diploperennis isolate d1b MPI (mpi) gene, com...
50
0.006
22 emb|X82187.1|ZMPIS7 Z.mays mRNA for pis7
50
0.006
23 emb|X78988.2|ZMMPI Zea mays MPI gene
50
0.006
24 emb|X69972.1|ZMCIMS Z.mays mRNA for subtilisin-chymotrypsin inhi...
50
0.006
25 dbj|AK121693.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.006
26 dbj|AK063833.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.006
27 gb|AY104061.1| Zea mays PCO087322 mRNA sequence
50
0.006
28 gb|AY878693.1| Oryza sativa (japonica cultivar-group) subitilisi...
50
0.006
29 emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112...
50
0.006
30 gb|DQ147231.1| Zea mays subsp. parviglumis isolate 11c maize pro...
50
0.006
31 gb|DQ147230.1| Zea mays subsp. parviglumis isolate 11b maize pro...
50
0.006
32 gb|DQ147229.1| Zea mays subsp. parviglumis isolate 10a maize pro...
50
0.006
33 gb|DQ147228.1| Zea mays subsp. parviglumis isolate 10b maize pro...
50
0.006
34 gb|DQ147227.1| Zea mays subsp. parviglumis isolate 9b maize prot...
50
0.006
35 gb|DQ147226.1| Zea mays subsp. parviglumis isolate 9a maize prot...
50
0.006
36 gb|DQ147225.1| Zea mays subsp. parviglumis isolate 8b maize prot...
50
0.006
37 gb|DQ147224.1| Zea mays subsp. parviglumis isolate 7a maize prot...
50
0.006
38 gb|DQ147223.1| Zea mays subsp. parviglumis isolate 6b maize prot...
50
0.006
39 gb|DQ147222.1| Zea mays subsp. parviglumis isolate 5a maize prot...
50
0.006
40 gb|DQ147221.1| Zea mays subsp. parviglumis isolate 5b maize prot...
50
0.006
41 gb|DQ147220.1| Zea mays subsp. parviglumis isolate 4b maize prot...
50
0.006
42 gb|DQ147219.1| Zea mays subsp. parviglumis isolate 4c maize prot...
50
0.006
43 gb|DQ147218.1| Zea mays subsp. parviglumis isolate 3c maize prot...
50
0.006
44 gb|DQ147217.1| Zea mays subsp. parviglumis isolate 3a maize prot...
50
0.006
45 gb|DQ147216.1| Zea mays subsp. parviglumis isolate 2a maize prot...
50
0.006
46 gb|DQ147215.1| Zea mays subsp. parviglumis isolate 1b maize prot...
50
0.006
47 gb|AY549627.1| Tripsacum dactyloides MPI (mpi) gene, complete cds
48
0.023
48 gb|AY424272.1| Brachypodium distachyon ecotype ABR5 serine prote...
48
0.023
49 gb|AY112541.1| Zea mays CL44946_1 mRNA sequence
48
0.023
50 gb|AC108157.3| Homo sapiens BAC clone RP11-580P21 from 4, comple...
44
0.36
51 gb|U51243.1|HSU51243 Human alpha-albumin gene, complete cds
44
0.36
52 gb|M21400.1|BLYCI1A Barley chymotrypsin inhibitor (CI-1A) mRNA, ...
44
0.36
53 gb|AY549620.1| Zea perennis MPI (mpi) gene, complete cds
42
1.4
54 gb|AY549615.1| Zea perennis isolate per2b MPI (mpi) gene, comple...
42
1.4
55 gb|AY549613.1| Zea perennis isolate per1c MPI (mpi) gene, comple...
42
1.4
56 gb|AY549610.1| Zea diploperennis isolate d8b MPI (mpi) gene, com...
42
1.4
57 gb|AY549609.1| Zea diploperennis isolate d8a MPI (mpi) gene, com...
42
1.4
58 gb|AY549608.1| Zea diploperennis isolate d7b MPI (mpi) gene, com...
42
1.4
59 gb|AY549607.1| Zea diploperennis isolate d7a MPI (mpi) gene, com...
42
1.4
60 gb|AY549606.1| Zea diploperennis isolate d6b MPI (mpi) gene, com...
42
1.4
61 gb|AY549605.1| Zea diploperennis isolate d6a MPI (mpi) gene, com...
42
1.4
62 gb|AY549604.1| Zea diploperennis isolate d5b MPI (mpi) gene, com...
42
1.4
63 gb|AY549603.1| Zea diploperennis isolate d5a MPI (mpi) gene, com...
42
1.4
64 gb|AY549602.1| Zea diploperennis isolate d4a MPI (mpi) gene, com...
42
1.4
65 gb|AY549601.1| Zea diploperennis isolate d3a MPI (mpi) gene, com...
42
1.4
66 gb|AY549600.1| Zea diploperennis isolate d2a MPI (mpi) gene, com...
42
1.4
67 gb|AY549598.1| Zea diploperennis isolate d1a MPI (mpi) gene, com...
42
1.4
68 ref|XM_369944.1| Magnaporthe grisea 70-15 hypothetical protein (...
40
5.6
69 emb|CT009509.7| Mouse DNA sequence from clone RP23-140C10 on chr...
40
5.6
70 ref|XM_537053.2| PREDICTED: Canis familiaris similar to Cofilin-...
40
5.6
71 gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete s...
40
5.6
72 emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ...
40
5.6
73 ref|XM_682322.1| PREDICTED: Danio rerio similar to papilin (LOC5...
40
5.6
74 gb|AC147918.2| Xenopus tropicalis clone CH216-8N16, complete seq...
40
5.6
75 gb|AF152393.1|MMTSP4S2 Mus musculus thrombospondin 4 gene, parti...
40
5.6
76 gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy...
40
5.6
77 gb|AC166113.3| Mus musculus BAC clone RP23-23E6 from chromosome ...
40
5.6
>gb|AF427791.1 | Hordeum vulgare Mla locus, complete sequence
Length = 261265
Score = 761 bits (384), Expect = 0.0
Identities = 387/388 (99%)
Strand = Plus / Plus
Query: 1 aatatgaagcacaaattataaataactggtcaagtacattgatccacaggtagcatgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220456 aatatgaagcacaaattataaataactggtcaagtacattgatccacaggtagcatgctg 220515
Query: 61 gtggtcagcatctatttattgatccatgcttattggaagtacttattcatcagcatccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220516 gtggtcagcatctatttattgatccatgcttattggaagtacttattcatcagcatccac 220575
Query: 121 aatgcatccatgttgcctttgcttgcaaagctagctagccaatgtggggagtggacgcga 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 220576 aatgcatccatgttgcctttgcttgcaaagctagctagccaatgtggggaatggacgcga 220635
Query: 181 cagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtcaccggcgagccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220636 cagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtcaccggcgagccgg 220695
Query: 241 ctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctccttggcctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220696 ctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctccttggcctcct 220755
Query: 301 cgatggactttcccactacctccggccatgacgtcttcttctcctctccggcgggggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220756 cgatggactttcccactacctccggccatgacgtcttcttctcctctccggcgggggctt 220815
Query: 361 ttggggcggcgcagctcatcctcgattc 388
||||||||||||||||||||||||||||
Sbjct: 220816 ttggggcggcgcagctcatcctcgattc 220843
Score = 174 bits (88), Expect = 1e-40
Identities = 124/136 (91%)
Strand = Plus / Plus
Query: 253 cgatgtccgcttcaggcatgtccttaaggatgatctccttggcctcctcgatggactttc 312
|||||||| |||||||||||||||| ||||||| |||| |||| |||||||||||||| |
Sbjct: 217638 cgatgtccacttcaggcatgtccttgaggatgacctccctggcgtcctcgatggacttcc 217697
Query: 313 ccactacctccggccatgacgtcttcttctcctctccggcgggggcttttggggcggcgc 372
|||||| |||||||||||||| |||||||||||| |||||||| ||||||||| | ||||
Sbjct: 217698 ccactaactccggccatgacgacttcttctcctcaccggcgggtgcttttgggtcagcgc 217757
Query: 373 agctcatcctcgattc 388
||||||||||||||||
Sbjct: 217758 agctcatcctcgattc 217773
Score = 167 bits (84), Expect = 4e-38
Identities = 180/212 (84%)
Strand = Plus / Plus
Query: 145 gcaaagctagctagccaatgtggggagtggacgcgacagtgtcgacgaagatgcggacac 204
||||| |||||||||| ||||| ||||||| ||||||||||||||| | || ||||||||
Sbjct: 223765 gcaaatctagctagccgatgtgaggagtggtcgcgacagtgtcgaccaggacgcggacac 223824
Query: 205 ggttggtcctgaagtcgagggtcaccggcgagccggctgggaggacgacgatgtccgctt 264
||||| |||| |||| || |||| ||| ||| |||||||| |||||||||||
Sbjct: 223825 ggttgctcctccagtctgcggccaccacggagttggcggggaggactttgatgtccgctt 223884
Query: 265 caggcatgtccttaaggatgatctccttggcctcctcgatggactttcccactacctccg 324
||||||| ||||| ||||||| |||| |||| |||||||||||||| ||||||| |||||
Sbjct: 223885 caggcatatccttgaggatgacctccctggcgtcctcgatggacttccccactaactccg 223944
Query: 325 gccatgacgtcttcttctcctctccggcgggg 356
||||||||| |||||||||||| |||||||||
Sbjct: 223945 gccatgacgacttcttctcctcaccggcgggg 223976
Score = 123 bits (62), Expect = 5e-25
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 187 cgacgaagatgcggacacggttggtcctgaagtcgagggtcaccggcgagccggctggga 246
|||||||||||||||||||||||| ||||||||| |||||||| ||||| | || |
Sbjct: 207140 cgacgaagatgcggacacggttgggcctgaagtcttcggtcaccgctgagccaaccggca 207081
Query: 247 ggacgacgatgtccgcttcaggcatgtccttaaggatgatctccttggcctcctcgatgg 306
|||||||||||| ||||||||| ||||||| || ||||||||||||||||||| |||||
Sbjct: 207080 cgacgacgatgtcggcttcaggcttgtccttgagaatgatctccttggcctccttgatgg 207021
Query: 307 actttcccactacctccggccatgacgtcttctt 340
| || || ||||||||||| |||||||||||
Sbjct: 207020 tcaggccgaccacctccggccaagacgtcttctt 206987
Score = 119 bits (60), Expect = 8e-24
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 241 ctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctccttggcctcct 300
|||||||||| |||||||||||||||||||||||| ||||||| || | |||| ||||
Sbjct: 225002 ctgggaggactttgatgtccgcttcaggcatgtccttgaggatgaccttcctggcgtcct 225061
Query: 301 cgatggactttcccactacctccggccatgacgtcttcttctcctctccggcgggg 356
|||||||||| ||||||| ||||| ||| |||| |||||||||||| |||||||||
Sbjct: 225062 cgatggacttccccactaactccgcccaggacgacttcttctcctcaccggcgggg 225117
Score = 83.8 bits (42), Expect = 4e-13
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 149 agctagctagccaatgtggggagtggacgcgacagtgtcgacgaagatgcggacacggtt 208
|||||||||||| ||||| ||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 217534 agctagctagccgatgtgaggagtggtcgcgacagtgtcaacgaggatgcggacacggtt 217593
Query: 209 ggtcct 214
| ||||
Sbjct: 217594 gctcct 217599
Score = 48.1 bits (24), Expect = 0.023
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 397 tgaacttgactgatatgagtattt 420
||||||||||||||||||||||||
Sbjct: 221013 tgaacttgactgatatgagtattt 221036
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 397 tgaacttgactgatatgagtattt 420
||||||||||||||| ||||||||
Sbjct: 218472 tgaacttgactgatacgagtattt 218495
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 99.6 bits (50), Expect = 7e-18
Identities = 134/162 (82%)
Strand = Plus / Plus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtcaccggcgag 236
||||| ||||| |||||||||||||| ||||||| | |||||||||||||||||||||
Sbjct: 22227277 gcgacggtgtcaacgaagatgcggacgcggttggagcggaagtcgagggtcaccggcgac 22227336
Query: 237 ccggctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctccttggcc 296
|| || || || ||||||||||| || || ||||||||||| ||||| | || ||| |||
Sbjct: 22227337 cccgccggaagcacgacgatgtcggcgtcgggcatgtccttgaggatcaccttcttcgcc 22227396
Query: 297 tcctcgatggactttcccactacctccggccatgacgtcttc 338
||||| ||| ||||| ||||||||||| |||||||||
Sbjct: 22227397 tcctccgccgacagccccaccacctccggccacgacgtcttc 22227438
Score = 65.9 bits (33), Expect = 1e-07
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtcaccggcgag 236
||||| |||||||||||||||||||| ||||||| | |||||| | |||||||||||
Sbjct: 22236610 gcgacggtgtcgacgaagatgcggacgcggttggggcggaagtccatggtcaccggcgtc 22236669
Query: 237 ccggctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctccttggcc 296
|| | || | ||||||||||| || || ||||||||||| ||||| | || ||| |||
Sbjct: 22236670 cccaccggaaccacgacgatgtcggcgtcgggcatgtccttgaggatcaccttcttcgcc 22236729
Query: 297 tcctc 301
|||||
Sbjct: 22236730 tcctc 22236734
Score = 58.0 bits (29), Expect = 2e-05
Identities = 132/166 (79%), Gaps = 4/166 (2%)
Strand = Plus / Plus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtca----ccgg 232
||||| |||||||||||||||||||| ||||||| | |||||| ||||| ||||
Sbjct: 22231902 gcgacggtgtcgacgaagatgcggacgcggttggggcggaagtccttggtcaccggccgg 22231961
Query: 233 cgagccggctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctcctt 292
||| || || || || ||||||||||| || || ||||||||||| ||||| | || |||
Sbjct: 22231962 cgaccccgccggaagcacgacgatgtcggcgtcgggcatgtccttgaggatcaccttctt 22232021
Query: 293 ggcctcctcgatggactttcccactacctccggccatgacgtcttc 338
|||||||| | | | ||||| ||||||||||| |||||||||
Sbjct: 22232022 cgcctcctccaccggcagccccaccacctccggccacgacgtcttc 22232067
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttg 209
||||| |||||||||||||| ||||||||||||
Sbjct: 14455880 gcgacggtgtcgacgaagattcggacacggttg 14455912
>gb|DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 99.6 bits (50), Expect = 7e-18
Identities = 134/162 (82%)
Strand = Plus / Plus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtcaccggcgag 236
||||| ||||| |||||||||||||| ||||||| | |||||||||||||||||||||
Sbjct: 22155622 gcgacggtgtcaacgaagatgcggacgcggttggagcggaagtcgagggtcaccggcgac 22155681
Query: 237 ccggctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctccttggcc 296
|| || || || ||||||||||| || || ||||||||||| ||||| | || ||| |||
Sbjct: 22155682 cccgccggaagcacgacgatgtcggcgtcgggcatgtccttgaggatcaccttcttcgcc 22155741
Query: 297 tcctcgatggactttcccactacctccggccatgacgtcttc 338
||||| ||| ||||| ||||||||||| |||||||||
Sbjct: 22155742 tcctccgccgacagccccaccacctccggccacgacgtcttc 22155783
Score = 65.9 bits (33), Expect = 1e-07
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtcaccggcgag 236
||||| |||||||||||||||||||| ||||||| | |||||| | |||||||||||
Sbjct: 22164955 gcgacggtgtcgacgaagatgcggacgcggttggggcggaagtccatggtcaccggcgtc 22165014
Query: 237 ccggctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctccttggcc 296
|| | || | ||||||||||| || || ||||||||||| ||||| | || ||| |||
Sbjct: 22165015 cccaccggaaccacgacgatgtcggcgtcgggcatgtccttgaggatcaccttcttcgcc 22165074
Query: 297 tcctc 301
|||||
Sbjct: 22165075 tcctc 22165079
Score = 58.0 bits (29), Expect = 2e-05
Identities = 132/166 (79%), Gaps = 4/166 (2%)
Strand = Plus / Plus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtca----ccgg 232
||||| |||||||||||||||||||| ||||||| | |||||| ||||| ||||
Sbjct: 22160247 gcgacggtgtcgacgaagatgcggacgcggttggggcggaagtccttggtcaccggccgg 22160306
Query: 233 cgagccggctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctcctt 292
||| || || || || ||||||||||| || || ||||||||||| ||||| | || |||
Sbjct: 22160307 cgaccccgccggaagcacgacgatgtcggcgtcgggcatgtccttgaggatcaccttctt 22160366
Query: 293 ggcctcctcgatggactttcccactacctccggccatgacgtcttc 338
|||||||| | | | ||||| ||||||||||| |||||||||
Sbjct: 22160367 cgcctcctccaccggcagccccaccacctccggccacgacgtcttc 22160412
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttg 209
||||| |||||||||||||| ||||||||||||
Sbjct: 14410164 gcgacggtgtcgacgaagattcggacacggttg 14410196
>emb|AL731742.3 |CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 155585
Score = 99.6 bits (50), Expect = 7e-18
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtcaccggcgag 236
||||| ||||| |||||||||||||| ||||||| | |||||||||||||||||||||
Sbjct: 25733 gcgacggtgtcaacgaagatgcggacgcggttggagcggaagtcgagggtcaccggcgac 25674
Query: 237 ccggctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctccttggcc 296
|| || || || ||||||||||| || || ||||||||||| ||||| | || ||| |||
Sbjct: 25673 cccgccggaagcacgacgatgtcggcgtcgggcatgtccttgaggatcaccttcttcgcc 25614
Query: 297 tcctcgatggactttcccactacctccggccatgacgtcttc 338
||||| ||| ||||| ||||||||||| |||||||||
Sbjct: 25613 tcctccgccgacagccccaccacctccggccacgacgtcttc 25572
Score = 65.9 bits (33), Expect = 1e-07
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtcaccggcgag 236
||||| |||||||||||||||||||| ||||||| | |||||| | |||||||||||
Sbjct: 16400 gcgacggtgtcgacgaagatgcggacgcggttggggcggaagtccatggtcaccggcgtc 16341
Query: 237 ccggctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctccttggcc 296
|| | || | ||||||||||| || || ||||||||||| ||||| | || ||| |||
Sbjct: 16340 cccaccggaaccacgacgatgtcggcgtcgggcatgtccttgaggatcaccttcttcgcc 16281
Query: 297 tcctc 301
|||||
Sbjct: 16280 tcctc 16276
Score = 58.0 bits (29), Expect = 2e-05
Identities = 132/166 (79%), Gaps = 4/166 (2%)
Strand = Plus / Minus
Query: 177 gcgacagtgtcgacgaagatgcggacacggttggtcctgaagtcgagggtca----ccgg 232
||||| |||||||||||||||||||| ||||||| | |||||| ||||| ||||
Sbjct: 21108 gcgacggtgtcgacgaagatgcggacgcggttggggcggaagtccttggtcaccggccgg 21049
Query: 233 cgagccggctgggaggacgacgatgtccgcttcaggcatgtccttaaggatgatctcctt 292
||| || || || || ||||||||||| || || ||||||||||| ||||| | || |||
Sbjct: 21048 cgaccccgccggaagcacgacgatgtcggcgtcgggcatgtccttgaggatcaccttctt 20989
Query: 293 ggcctcctcgatggactttcccactacctccggccatgacgtcttc 338
|||||||| | | | ||||| ||||||||||| |||||||||
Sbjct: 20988 cgcctcctccaccggcagccccaccacctccggccacgacgtcttc 20943
>gb|AC166113.3 | Mus musculus BAC clone RP23-23E6 from chromosome 14, complete sequence
Length = 252394
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 271 tgtccttaaggatgatctccttggcctc 298
|||||||||||||| ||| |||||||||
Sbjct: 98490 tgtccttaaggatgttctgcttggcctc 98517
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,817,970
Number of Sequences: 3902068
Number of extensions: 3817970
Number of successful extensions: 75022
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74708
Number of HSP's gapped (non-prelim): 312
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)