Clone Name | rbart07f09 |
---|---|
Clone Library Name | barley_pub |
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 42.1 bits (21), Expect = 0.79 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ttttaacaatgccatgataaa 63 ||||||||||||||||||||| Sbjct: 1650435 ttttaacaatgccatgataaa 1650455
>ref|XM_534679.2| PREDICTED: Canis familiaris similar to a disintegrin and metalloproteinase domain 1a (LOC477481), mRNA Length = 3312 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 aatggcagtgctttaaattg 110 |||||||||||||||||||| Sbjct: 2430 aatggcagtgctttaaattg 2411
>gb|AC122035.2| Mus musculus BAC clone RP24-414B1 from 15, complete sequence Length = 179617 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tgggaaattgatttgtaaat 93 |||||||||||||||||||| Sbjct: 83146 tgggaaattgatttgtaaat 83127
>emb|AL034375.23|HS523G1 Human DNA sequence from clone RP3-523G1 on chromosome 6p22.3-24.1 Contains part of the SCA1 gene for spinocerebellar ataxia 1 (olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1), complete sequence Length = 109885 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 ggccagggtagcttacaagcagct 157 |||||||||||||||| ||||||| Sbjct: 26624 ggccagggtagcttaccagcagct 26601
>gb|AC151467.2| Xenopus tropicalis BAC clone ISB1-324H4 containing mix-like gene, mix gene, complete cds; and mix, bix-like, and bix genes, complete cds, complete sequence Length = 77269 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 atgataaatatatgctgctg 75 |||||||||||||||||||| Sbjct: 42882 atgataaatatatgctgctg 42901
>gb|AC006122.24| Homo sapiens 12 BAC RP11-264F23 (Roswell Park Cancer Institute Human Bac Library) complete sequence Length = 127957 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aagtaatctacaaataccgg 135 |||||||||||||||||||| Sbjct: 12538 aagtaatctacaaataccgg 12557
>gb|AF129168.1|AF129168 Lactobacillus casei sorbose operon, partial sequence Length = 7135 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 aagttttaacaatgccatgataaa 63 |||||||| ||||||||||||||| Sbjct: 7040 aagttttagcaatgccatgataaa 7017
>gb|AC150475.2| Dasypus novemcinctus clone VMRC5-254H15, complete sequence Length = 114142 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 aagaatagattataacccca 182 |||||||||||||||||||| Sbjct: 37324 aagaatagattataacccca 37305
>gb|AC119967.11| Mus musculus chromosome 10, clone RP24-473K14, complete sequence Length = 196661 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 atggcagtgctttaaattga 111 |||||||||||||||||||| Sbjct: 158010 atggcagtgctttaaattga 158029
>gb|AC146366.3| Dasypus novemcinctus clone VMRC5-468M8, complete sequence Length = 112552 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 aagaatagattataacccca 182 |||||||||||||||||||| Sbjct: 101739 aagaatagattataacccca 101720 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,158,314 Number of Sequences: 3902068 Number of extensions: 2158314 Number of successful extensions: 37595 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37578 Number of HSP's gapped (non-prelim): 17 length of query: 242 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 220 effective length of database: 17,147,199,772 effective search space: 3772383949840 effective search space used: 3772383949840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)