ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart07f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009015.1| Triticum aestivum clone wdk3c.pk006.f13:fis, full... 410 e-111
2gb|BT008989.1| Triticum aestivum clone wdk2c.pk010.a3:fis, full ... 410 e-111
3gb|AY224545.1| Oryza sativa (japonica cultivar-group) isolate 23... 157 4e-35
4dbj|AB110188.1| Oryza sativa (japonica cultivar-group) mRNA for ... 157 4e-35
5gb|AY224464.1| Oryza sativa (japonica cultivar-group) isolate 23... 157 4e-35
6dbj|AK068424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 4e-35
7gb|AY109267.1| Zea mays PCO080109 mRNA sequence 137 4e-29
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 98 3e-17
9gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome... 98 3e-17
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
11emb|AJ717860.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT12-3-15... 98 3e-17
12ref|NM_113306.2| Arabidopsis thaliana DNA binding / protein bind... 76 1e-10
13gb|BT024927.1| Arabidopsis thaliana At3g24010 mRNA, complete cds 76 1e-10
14gb|BT003957.1| Arabidopsis thaliana clone RAFL15-11-H06 (R20779)... 76 1e-10
15gb|AY088805.1| Arabidopsis thaliana clone 95660 mRNA, complete s... 76 1e-10
16emb|BX822626.1|CNS0A4UJ Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
17ref|XM_517550.1| PREDICTED: Pan troglodytes similar to inhibitor... 60 7e-06
18ref|NM_001564.2| Homo sapiens inhibitor of growth family, member... 60 7e-06
19gb|AC107214.5| Homo sapiens BAC clone RP11-367N14 from 4, comple... 60 7e-06
20emb|AJ006851.1|HSAJ6851 Homo sapiens mRNA for p32 protein 60 7e-06
21gb|AF053537.1|AF053537 Homo sapiens p33 (ING2) mRNA, complete cds 60 7e-06
22gb|AF062748.1|HSING2S2 Homo sapiens p33 (ING2) gene, exon 2, com... 60 7e-06
23gb|BC030128.2| Homo sapiens inhibitor of growth family, member 2... 60 7e-06
24dbj|AB012853.1| Homo sapiens ING1L mRNA for ING1Lp, complete cds 60 7e-06
25gb|AC149482.1| Populus trichocarpa clone Pop1-69G3, complete seq... 58 3e-05
26dbj|AP001297.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 58 3e-05
27ref|XM_416956.1| PREDICTED: Gallus gallus similar to ING1 protei... 54 4e-04
28emb|CR387170.1| Gallus gallus finished cDNA, clone ChEST265n11 54 4e-04
29emb|CR352408.1| Gallus gallus finished cDNA, clone ChEST79p16 54 4e-04
30ref|XM_420514.1| PREDICTED: Gallus gallus similar to inhibitor o... 48 0.026
31emb|BX930827.2| Gallus gallus finished cDNA, clone ChEST966h7 48 0.026
32emb|BX929936.1| Gallus gallus finished cDNA, clone ChEST760k8 48 0.026
33emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephal... 48 0.026
34ref|XM_380473.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 44 0.41
35emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 42 1.6
36emb|AJ296302.1|HSA296302 Homo sapiens partial TUB gene for mouse... 40 6.4
37emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in... 40 6.4
38gb|AC151353.2| Xenopus tropicalis clone ISB-4M1, complete sequence 40 6.4
39gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome... 40 6.4
40gb|BC084202.1| Xenopus laevis hypothetical LOC495052, mRNA (cDNA... 40 6.4
41gb|AC116456.12| Homo sapiens chromosome 11, clone RP11-236J17, c... 40 6.4 
>gb|BT009015.1| Triticum aestivum clone wdk3c.pk006.f13:fis, full insert mRNA
           sequence
          Length = 960

 Score =  410 bits (207), Expect = e-111
 Identities = 251/266 (94%)
 Strand = Plus / Minus

                                                                       
Query: 204 atcagacgatcacggacgatcaagcgccgacctcccagcataaggaccatatgcatctca 263
           |||||||||||||||| || | || ||  |||||| |||| |||| ||||||| ||||||
Sbjct: 812 atcagacgatcacggatgaccgagtgcatacctcctagcacaagggccatatgtatctca 753

                                                                       
Query: 264 cctgcccttccgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcgg 323
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 cctgcccttgcgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcgg 693

                                                                       
Query: 324 ctgctctttcaagcccacgcatccnaagtggaaccactctatcttgcaatcagggttgtc 383
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 692 ctgctctttcaagcccacgcatccaaagtggaaccactctatcttgcaatcagggttgtc 633

                                                                       
Query: 384 gcacgcgaccatctcaccataactgacttggttgcagaagcagtatgtcggttcattagg 443
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcacgcgaccatctcaccgtagctgacttggttgcagaagcagtatgtcggttcattagg 573

                                     
Query: 444 atcaacaggcaattctaaatctatag 469
           ||| ||||||||||||||||||||||
Sbjct: 572 atcgacaggcaattctaaatctatag 547



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                      
Query: 140 acaacatgtgcatgatcactcaagctacattcaacagctgcttcccaaacaaccgaggc 198
           |||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 889 acaacatgtgcaagatcactcaagctacattcaacagttgctttccaaacaagcgaggc 831
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>gb|BT008989.1| Triticum aestivum clone wdk2c.pk010.a3:fis, full insert mRNA
           sequence
          Length = 1137

 Score =  410 bits (207), Expect = e-111
 Identities = 251/266 (94%)
 Strand = Plus / Minus

                                                                       
Query: 204 atcagacgatcacggacgatcaagcgccgacctcccagcataaggaccatatgcatctca 263
           |||||||||||||||| || | || ||  |||||| |||| |||| ||||||| ||||||
Sbjct: 946 atcagacgatcacggatgaccgagtgcatacctcctagcacaagggccatatgtatctca 887

                                                                       
Query: 264 cctgcccttccgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcgg 323
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 cctgcccttgcgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcgg 827

                                                                       
Query: 324 ctgctctttcaagcccacgcatccnaagtggaaccactctatcttgcaatcagggttgtc 383
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 826 ctgctctttcaagcccacgcatccaaagtggaaccactctatcttgcaatcagggttgtc 767

                                                                       
Query: 384 gcacgcgaccatctcaccataactgacttggttgcagaagcagtatgtcggttcattagg 443
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gcacgcgaccatctcaccgtagctgacttggttgcagaagcagtatgtcggttcattagg 707

                                     
Query: 444 atcaacaggcaattctaaatctatag 469
           ||| ||||||||||||||||||||||
Sbjct: 706 atcgacaggcaattctaaatctatag 681



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                       
Query: 140  acaacatgtgcatgatcactcaagctacattcaacagctgcttcccaaacaaccgaggc 198
            |||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 1023 acaacatgtgcaagatcactcaagctacattcaacagttgctttccaaacaagcgaggc 965



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 58   tttcagtcaccagttcatctcccacacgaacagaagaaatttccgggttccaaacggggt 117
            ||||||||||||||||||| |||||| |||||||||||||| ||  |||| |||||||| 
Sbjct: 1113 tttcagtcaccagttcatcacccacaagaacagaagaaattcccatgttctaaacggggc 1054

                
Query: 118  caca 121
            ||||
Sbjct: 1053 caca 1050
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>gb|AY224545.1| Oryza sativa (japonica cultivar-group) isolate 23830 putative
           PHD-finger protein mRNA, complete cds
          Length = 762

 Score =  157 bits (79), Expect = 4e-35
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 cgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcggctgctctttc 333
           ||||||||||||||  |  |||||||  ||||||||||||||||| |||| |||||||||
Sbjct: 749 cgcttcttttggaatccaatgcaacttgggcaataccacttccccttcggatgctctttc 690

                                                                       
Query: 334 aagcccacgcatccnaagtggaaccactctatcttgcaatcagggttgtcgcacgcgacc 393
           | ||| ||||| || |||||  |||| || ||||||||||||   |||||||| ||||||
Sbjct: 689 acgccgacgcacccaaagtgataccattcgatcttgcaatcattattgtcgcatgcgacc 630

                                                                       
Query: 394 atctcaccataactgacttggttgcagaagcagtatgtcggttcattaggatcaacaggc 453
           ||||| || || |||||||||||||||| ||| ||||| ||||| |||||||| ||||||
Sbjct: 629 atctctccgtagctgacttggttgcagaggcaatatgttggttcgttaggatccacaggc 570

                         
Query: 454 aattctaaatctat 467
           | ||||||||||||
Sbjct: 569 agttctaaatctat 556
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>dbj|AB110188.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 16FPG004
          Length = 1079

 Score =  157 bits (79), Expect = 4e-35
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 cgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcggctgctctttc 333
           ||||||||||||||  |  |||||||  ||||||||||||||||| |||| |||||||||
Sbjct: 814 cgcttcttttggaatccaatgcaacttgggcaataccacttccccttcggatgctctttc 755

                                                                       
Query: 334 aagcccacgcatccnaagtggaaccactctatcttgcaatcagggttgtcgcacgcgacc 393
           | ||| ||||| || |||||  |||| || ||||||||||||   |||||||| ||||||
Sbjct: 754 acgccgacgcacccaaagtgataccattcgatcttgcaatcattattgtcgcatgcgacc 695

                                                                       
Query: 394 atctcaccataactgacttggttgcagaagcagtatgtcggttcattaggatcaacaggc 453
           ||||| || || |||||||||||||||| ||| ||||| ||||| |||||||| ||||||
Sbjct: 694 atctctccgtagctgacttggttgcagaggcaatatgttggttcgttaggatccacaggc 635

                         
Query: 454 aattctaaatctat 467
           | ||||||||||||
Sbjct: 634 agttctaaatctat 621
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>gb|AY224464.1| Oryza sativa (japonica cultivar-group) isolate 23830 putative
           PHD-finger protein mRNA, complete cds
          Length = 762

 Score =  157 bits (79), Expect = 4e-35
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 cgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcggctgctctttc 333
           ||||||||||||||  |  |||||||  ||||||||||||||||| |||| |||||||||
Sbjct: 749 cgcttcttttggaatccaatgcaacttgggcaataccacttccccttcggatgctctttc 690

                                                                       
Query: 334 aagcccacgcatccnaagtggaaccactctatcttgcaatcagggttgtcgcacgcgacc 393
           | ||| ||||| || |||||  |||| || ||||||||||||   |||||||| ||||||
Sbjct: 689 acgccgacgcacccaaagtgataccattcgatcttgcaatcattattgtcgcatgcgacc 630

                                                                       
Query: 394 atctcaccataactgacttggttgcagaagcagtatgtcggttcattaggatcaacaggc 453
           ||||| || || |||||||||||||||| ||| ||||| ||||| |||||||| ||||||
Sbjct: 629 atctctccgtagctgacttggttgcagaggcaatatgttggttcgttaggatccacaggc 570

                         
Query: 454 aattctaaatctat 467
           | ||||||||||||
Sbjct: 569 agttctaaatctat 556
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>dbj|AK068424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154F02, full
           insert sequence
          Length = 1225

 Score =  157 bits (79), Expect = 4e-35
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 cgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcggctgctctttc 333
           ||||||||||||||  |  |||||||  ||||||||||||||||| |||| |||||||||
Sbjct: 904 cgcttcttttggaatccaatgcaacttgggcaataccacttccccttcggatgctctttc 845

                                                                       
Query: 334 aagcccacgcatccnaagtggaaccactctatcttgcaatcagggttgtcgcacgcgacc 393
           | ||| ||||| || |||||  |||| || ||||||||||||   |||||||| ||||||
Sbjct: 844 acgccgacgcacccaaagtgataccattcgatcttgcaatcattattgtcgcatgcgacc 785

                                                                       
Query: 394 atctcaccataactgacttggttgcagaagcagtatgtcggttcattaggatcaacaggc 453
           ||||| || || |||||||||||||||| ||| ||||| ||||| |||||||| ||||||
Sbjct: 784 atctctccgtagctgacttggttgcagaggcaatatgttggttcgttaggatccacaggc 725

                         
Query: 454 aattctaaatctat 467
           | ||||||||||||
Sbjct: 724 agttctaaatctat 711
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>gb|AY109267.1| Zea mays PCO080109 mRNA sequence
          Length = 1112

 Score =  137 bits (69), Expect = 4e-29
 Identities = 146/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 302 ggcaataccacttccccctcggctgctctttcaagcccacgcatccnaagtggaaccact 361
           ||||||||||||| ||| | || ||||| || | |||||| || ||  ||||  ||||||
Sbjct: 850 ggcaataccactttcccttgggttgctccttgacgcccacacagccatagtgataccact 791

                                                                       
Query: 362 ctatcttgcaatcagggttgtcgcacgcgaccatctcaccataactgacttggttgcaga 421
           | || ||||||| ||| |||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 790 cgattttgcaattaggattgtcgcatgccaccatctcaccatagctgacttggttgcaga 731

                                                               
Query: 422 agcagtatgtcggttcattaggatcaacaggcaattctaaatctataggtgg 473
            ||||||||||||||| |||||||| |||||||| ||||| || ||||||||
Sbjct: 730 ggcagtatgtcggttcgttaggatccacaggcaactctaagtcaataggtgg 679
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                           
Query: 379     ttgtcgcacgcgaccatctcaccataactgacttggttgcagaagcagtatgtcggttca 438
               |||||||| ||||||||||| || || |||||||||||||||| ||| ||||| ||||| 
Sbjct: 2394572 ttgtcgcatgcgaccatctctccgtagctgacttggttgcagaggcaatatgttggttcg 2394513

                                            
Query: 439     ttaggatcaacaggcaattctaaatctat 467
               |||||||| ||||||| ||||||||||||
Sbjct: 2394512 ttaggatccacaggcagttctaaatctat 2394484



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                           
Query: 274     cgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcggctgctctttc 333
               ||||||||||||||  |  |||||||  ||||||||||||||||| |||| |||||||||
Sbjct: 2394787 cgcttcttttggaatccaatgcaacttgggcaataccacttccccttcggatgctctttc 2394728

                                                     
Query: 334     aagcccacgcatccnaagtggaaccactctatcttgca 371
               | ||| ||||| || |||||  |||| || ||||||||
Sbjct: 2394727 acgccgacgcacccaaagtgataccattcgatcttgca 2394690
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>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24,
              complete sequence
          Length = 150503

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                          
Query: 379    ttgtcgcacgcgaccatctcaccataactgacttggttgcagaagcagtatgtcggttca 438
              |||||||| ||||||||||| || || |||||||||||||||| ||| ||||| ||||| 
Sbjct: 111414 ttgtcgcatgcgaccatctctccgtagctgacttggttgcagaggcaatatgttggttcg 111355

                                           
Query: 439    ttaggatcaacaggcaattctaaatctat 467
              |||||||| ||||||| ||||||||||||
Sbjct: 111354 ttaggatccacaggcagttctaaatctat 111326



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                          
Query: 274    cgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcggctgctctttc 333
              ||||||||||||||  |  |||||||  ||||||||||||||||| |||| |||||||||
Sbjct: 111629 cgcttcttttggaatccaatgcaacttgggcaataccacttccccttcggatgctctttc 111570

                                                    
Query: 334    aagcccacgcatccnaagtggaaccactctatcttgca 371
              | ||| ||||| || |||||  |||| || ||||||||
Sbjct: 111569 acgccgacgcacccaaagtgataccattcgatcttgca 111532
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                           
Query: 379     ttgtcgcacgcgaccatctcaccataactgacttggttgcagaagcagtatgtcggttca 438
               |||||||| ||||||||||| || || |||||||||||||||| ||| ||||| ||||| 
Sbjct: 2394682 ttgtcgcatgcgaccatctctccgtagctgacttggttgcagaggcaatatgttggttcg 2394623

                                            
Query: 439     ttaggatcaacaggcaattctaaatctat 467
               |||||||| ||||||| ||||||||||||
Sbjct: 2394622 ttaggatccacaggcagttctaaatctat 2394594



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                           
Query: 274     cgcttcttttggaacgcgctgcaactcaggcaataccacttccccctcggctgctctttc 333
               ||||||||||||||  |  |||||||  ||||||||||||||||| |||| |||||||||
Sbjct: 2394897 cgcttcttttggaatccaatgcaacttgggcaataccacttccccttcggatgctctttc 2394838

                                                     
Query: 334     aagcccacgcatccnaagtggaaccactctatcttgca 371
               | ||| ||||| || |||||  |||| || ||||||||
Sbjct: 2394837 acgccgacgcacccaaagtgataccattcgatcttgca 2394800
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>emb|AJ717860.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT12-3-155, cultivar Bright
           Yellow 2
          Length = 112

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 85/97 (87%)
 Strand = Plus / Minus

                                                                       
Query: 350 agtggaaccactctatcttgcaatcagggttgtcgcacgcgaccatctcaccataactga 409
           |||||||||||||||| ||||||| ||| ||||||||||| ||||| |||||||| || |
Sbjct: 97  agtggaaccactctattttgcaattaggattgtcgcacgcaaccatttcaccatagctaa 38

                                                
Query: 410 cttggttgcagaagcagtatgtcggttcattaggatc 446
           |||| |||||||| || ||||| |||||||| |||||
Sbjct: 37  cttgattgcagaaacaatatgttggttcatttggatc 1
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>ref|NM_113306.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion
           binding AT3G24010 mRNA, complete cds
          Length = 901

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 124/153 (81%)
 Strand = Plus / Minus

                                                                       
Query: 302 ggcaataccacttccccctcggctgctctttcaagcccacgcatccnaagtggaaccact 361
           |||| ||||| |||||| | || || |||||||  || ||||| || || ||||||||||
Sbjct: 698 ggcagtaccatttccccttgggttgttctttcagaccgacgcaaccgaaatggaaccact 639

                                                                       
Query: 362 ctatcttgcaatcagggttgtcgcacgcgaccatctcaccataactgacttggttgcaga 421
           | ||||||||  ||  |||||| ||||| |||||||| ||| | || |||||||||||||
Sbjct: 638 caatcttgcacgcattgttgtcacacgcaaccatctcgccaaagctaacttggttgcaga 579

                                            
Query: 422 agcagtatgtcggttcattaggatcaacaggca 454
            |||||| || ||||| || ||||| |||||||
Sbjct: 578 tgcagtaagttggttcgtttggatccacaggca 546
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>gb|BT024927.1| Arabidopsis thaliana At3g24010 mRNA, complete cds
          Length = 705

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 124/153 (81%)
 Strand = Plus / Minus

                                                                       
Query: 302 ggcaataccacttccccctcggctgctctttcaagcccacgcatccnaagtggaaccact 361
           |||| ||||| |||||| | || || |||||||  || ||||| || || ||||||||||
Sbjct: 664 ggcagtaccatttccccttgggttgttctttcagaccgacgcaaccgaaatggaaccact 605

                                                                       
Query: 362 ctatcttgcaatcagggttgtcgcacgcgaccatctcaccataactgacttggttgcaga 421
           | ||||||||  ||  |||||| ||||| |||||||| ||| | || |||||||||||||
Sbjct: 604 caatcttgcacgcattgttgtcacacgcaaccatctcgccaaagctaacttggttgcaga 545

                                            
Query: 422 agcagtatgtcggttcattaggatcaacaggca 454
            |||||| || ||||| || ||||| |||||||
Sbjct: 544 tgcagtaagttggttcgtttggatccacaggca 512
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>gb|BT003957.1| Arabidopsis thaliana clone RAFL15-11-H06 (R20779) putative
           PHD-finger protein (At3g24010) mRNA, partial cds
          Length = 662

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 124/153 (81%)
 Strand = Plus / Minus

                                                                       
Query: 302 ggcaataccacttccccctcggctgctctttcaagcccacgcatccnaagtggaaccact 361
           |||| ||||| |||||| | || || |||||||  || ||||| || || ||||||||||
Sbjct: 444 ggcagtaccatttccccttgggttgttctttcagaccgacgcaaccgaaatggaaccact 385

                                                                       
Query: 362 ctatcttgcaatcagggttgtcgcacgcgaccatctcaccataactgacttggttgcaga 421
           | ||||||||  ||  |||||| ||||| |||||||| ||| | || |||||||||||||
Sbjct: 384 caatcttgcacgcattgttgtcacacgcaaccatctcgccaaagctaacttggttgcaga 325

                                            
Query: 422 agcagtatgtcggttcattaggatcaacaggca 454
            |||||| || ||||| || ||||| |||||||
Sbjct: 324 tgcagtaagttggttcgtttggatccacaggca 292
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>gb|AY088805.1| Arabidopsis thaliana clone 95660 mRNA, complete sequence
          Length = 868

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 124/153 (81%)
 Strand = Plus / Minus

                                                                       
Query: 302 ggcaataccacttccccctcggctgctctttcaagcccacgcatccnaagtggaaccact 361
           |||| ||||| |||||| | || || |||||||  || ||||| || || ||||||||||
Sbjct: 698 ggcagtaccatttccccttgggttgttctttcagaccgacgcaaccgaaatggaaccact 639

                                                                       
Query: 362 ctatcttgcaatcagggttgtcgcacgcgaccatctcaccataactgacttggttgcaga 421
           | ||||||||  ||  |||||| ||||| |||||||| ||| | || |||||||||||||
Sbjct: 638 caatcttgcacgcattgttgtcacacgcaaccatctcgccaaagctaacttggttgcaga 579

                                            
Query: 422 agcagtatgtcggttcattaggatcaacaggca 454
            |||||| || ||||| || ||||| |||||||
Sbjct: 578 tgcagtaagttggttcgtttggatccacaggca 546
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>emb|BX822626.1|CNS0A4UJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB54ZB03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1346

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 123/153 (80%)
 Strand = Plus / Minus

                                                                        
Query: 302  ggcaataccacttccccctcggctgctctttcaagcccacgcatccnaagtggaaccact 361
            |||| ||||| |||||| | || || |||||||  || ||||| || || ||||||||||
Sbjct: 1217 ggcagtaccatttccccttgggttgttctttcagaccgacgcaaccaaaatggaaccact 1158

                                                                        
Query: 362  ctatcttgcaatcagggttgtcgcacgcgaccatctcaccataactgacttggttgcaga 421
              ||||||||  ||  |||||  ||||| |||||||| ||| |||| |||||||||||||
Sbjct: 1157 taatcttgcacgcattgttgtaacacgcaaccatctcgccaaaactaacttggttgcaga 1098

                                             
Query: 422  agcagtatgtcggttcattaggatcaacaggca 454
             |||||| || ||||| || ||||| |||||||
Sbjct: 1097 tgcagtaagttggttcgtttggatccacaggca 1065
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>ref|XM_517550.1| PREDICTED: Pan troglodytes similar to inhibitor of growth family,
            member 1-like; inhibitor of growth 1-like (LOC461625),
            mRNA
          Length = 1736

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 409  acttggttgcagaagcagtatgtcggttcattaggatc 446
            ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1181 acttggttgcataagcagtatgtaggttcattaggatc 1144
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>ref|NM_001564.2| Homo sapiens inhibitor of growth family, member 2 (ING2), mRNA
          Length = 1135

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 409 acttggttgcagaagcagtatgtcggttcattaggatc 446
           ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 788 acttggttgcataagcagtatgtaggttcattaggatc 751
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>gb|AC107214.5| Homo sapiens BAC clone RP11-367N14 from 4, complete sequence
          Length = 183317

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 409   acttggttgcagaagcagtatgtcggttcattaggatc 446
             ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 45696 acttggttgcataagcagtatgtaggttcattaggatc 45659
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>emb|AJ006851.1|HSAJ6851 Homo sapiens mRNA for p32 protein
          Length = 843

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 409 acttggttgcagaagcagtatgtcggttcattaggatc 446
           ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 659 acttggttgcataagcagtatgtaggttcattaggatc 622
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>gb|AF053537.1|AF053537 Homo sapiens p33 (ING2) mRNA, complete cds
          Length = 1080

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 409 acttggttgcagaagcagtatgtcggttcattaggatc 446
           ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 726 acttggttgcataagcagtatgtaggttcattaggatc 689
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>gb|AF062748.1|HSING2S2 Homo sapiens p33 (ING2) gene, exon 2, complete sequence; and
           complete cds
          Length = 974

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 409 acttggttgcagaagcagtatgtcggttcattaggatc 446
           ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 610 acttggttgcataagcagtatgtaggttcattaggatc 573
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>gb|BC030128.2| Homo sapiens inhibitor of growth family, member 2, mRNA (cDNA clone
           MGC:10524 IMAGE:3941655), complete cds
          Length = 1132

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 409 acttggttgcagaagcagtatgtcggttcattaggatc 446
           ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 785 acttggttgcataagcagtatgtaggttcattaggatc 748
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>dbj|AB012853.1| Homo sapiens ING1L mRNA for ING1Lp, complete cds
          Length = 1078

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 409 acttggttgcagaagcagtatgtcggttcattaggatc 446
           ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 750 acttggttgcataagcagtatgtaggttcattaggatc 713
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>gb|AC149482.1| Populus trichocarpa clone Pop1-69G3, complete sequence
          Length = 107795

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 376   gggttgtcgcacgcgaccatctcaccataactgacttggttgcagaagcagtatgtcggt 435
             ||||||||||| || | ||| || ||||| || ||||| |||||||| ||||| ||||||
Sbjct: 10864 gggttgtcgcatgcaatcatgtccccatagctaacttgattgcagaaacagtaagtcggt 10923

                                      
Query: 436   tcattaggatcaacaggcaattcta 460
             ||||| ||||| || ||||| ||||
Sbjct: 10924 tcattcggatccactggcaaatcta 10948
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>dbj|AP001297.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F14O13
          Length = 106203

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                         
Query: 378   gttgtcgcacgcgaccatctcaccataactgacttggttgcagaagcagtatgtcggttc 437
             |||||| ||||| |||||||| ||| | || ||||||||||||| |||||| || |||||
Sbjct: 79157 gttgtcacacgcaaccatctcgccaaagctaacttggttgcagatgcagtaagttggttc 79216

                              
Query: 438   attaggatcaacaggca 454
              || ||||| |||||||
Sbjct: 79217 gtttggatccacaggca 79233
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>ref|XM_416956.1| PREDICTED: Gallus gallus similar to ING1 protein (LOC418759), mRNA
          Length = 1752

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 408  gacttggttgcagaagcagtatgtcggttcattaggatc 446
            |||||||||||| |||||||||||||| || ||||||||
Sbjct: 1236 gacttggttgcataagcagtatgtcggctcgttaggatc 1198
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>emb|CR387170.1| Gallus gallus finished cDNA, clone ChEST265n11
          Length = 1045

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 408 gacttggttgcagaagcagtatgtcggttcattaggatc 446
           |||||||||||| |||||||||||||| || ||||||||
Sbjct: 527 gacttggttgcataagcagtatgtcggctcgttaggatc 489
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>emb|CR352408.1| Gallus gallus finished cDNA, clone ChEST79p16
          Length = 1599

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 408 gacttggttgcagaagcagtatgtcggttcattaggatc 446
           |||||||||||| |||||||||||||| || ||||||||
Sbjct: 496 gacttggttgcataagcagtatgtcggctcgttaggatc 458
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>ref|XM_420514.1| PREDICTED: Gallus gallus similar to inhibitor of growth family,
           member 1-like (LOC422553), mRNA
          Length = 1138

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 409 acttggttgcagaagcagtatgtcggttcattaggatcaa 448
           |||||||| || |||||||| ||||||||||| |||||||
Sbjct: 809 acttggttacataagcagtaagtcggttcattgggatcaa 770
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>emb|BX930827.2| Gallus gallus finished cDNA, clone ChEST966h7
          Length = 1339

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 409 acttggttgcagaagcagtatgtcggttcattaggatcaa 448
           |||||||| || |||||||| ||||||||||| |||||||
Sbjct: 559 acttggttacataagcagtaagtcggttcattgggatcaa 520
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>emb|BX929936.1| Gallus gallus finished cDNA, clone ChEST760k8
          Length = 1013

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 409 acttggttgcagaagcagtatgtcggttcattaggatcaa 448
           |||||||| || |||||||| ||||||||||| |||||||
Sbjct: 684 acttggttacataagcagtaagtcggttcattgggatcaa 645
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>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 262797

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 340    acgcatccnaagtggaaccactctatcttgcaatc 374
              |||||| | ||||||||||||||| ||||||||||
Sbjct: 145136 acgcattcaaagtggaaccactctctcttgcaatc 145102
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>ref|XM_380473.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00297.1)
            partial mRNA
          Length = 2160

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 382  tcgcacgcgaccatctcaccataactgacttggttgcagaagcagtatgtcggttcat 439
            |||||||| |||||||| || |||||||||  ||| ||| | ||||||||||| ||||
Sbjct: 2021 tcgcacgctaccatctcgccgtaactgactccgttacagtaacagtatgtcggctcat 1964
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 406     ctgacttggttgcagaagcag 426
               |||||||||||||||||||||
Sbjct: 3241382 ctgacttggttgcagaagcag 3241362
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>emb|AJ296302.1|HSA296302 Homo sapiens partial TUB gene for mouse tubby homologue, exons 1-9
          Length = 40996

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   tcattaggatcaacaggcaa 455
             ||||||||||||||||||||
Sbjct: 34772 tcattaggatcaacaggcaa 34791
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>emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in linkage group 15,
              complete sequence
          Length = 164720

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    acattcaacagctgcttccc 185
              ||||||||||||||||||||
Sbjct: 101345 acattcaacagctgcttccc 101326



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   acattcaacagctgcttccc 185
             ||||||||||||||||||||
Sbjct: 80728 acattcaacagctgcttccc 80709
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>gb|AC151353.2| Xenopus tropicalis clone ISB-4M1, complete sequence
          Length = 110908

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   gatcaacaggcaattctaaa 462
             ||||||||||||||||||||
Sbjct: 74344 gatcaacaggcaattctaaa 74325
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>gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome 13, complete sequence
          Length = 199707

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    catttcagtcaccagttcatctcc 79
             |||| |||||||||||||||||||
Sbjct: 62288 cattgcagtcaccagttcatctcc 62265
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>gb|BC084202.1| Xenopus laevis hypothetical LOC495052, mRNA (cDNA clone MGC:80132
           IMAGE:4970044), complete cds
          Length = 2521

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 gcagtatgtcggttcattaggatc 446
           ||||||||| ||||||||||||||
Sbjct: 637 gcagtatgtaggttcattaggatc 614
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>gb|AC116456.12| Homo sapiens chromosome 11, clone RP11-236J17, complete sequence
          Length = 146502

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   tcattaggatcaacaggcaa 455
             ||||||||||||||||||||
Sbjct: 91873 tcattaggatcaacaggcaa 91854


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,091,431
Number of Sequences: 3902068
Number of extensions: 3091431
Number of successful extensions: 47247
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47151
Number of HSP's gapped (non-prelim): 96
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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