ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart07f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185558.2| Oryza sativa (japonica cultivar-group), mRNA 157 2e-35
2ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group... 157 2e-35
3ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group... 157 2e-35
4dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 2e-35
5dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 2e-35
6dbj|AK070759.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 2e-35
7dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 2e-35
8dbj|D17789.1|RICHTBP2 Oryza sativa (japonica cultivar-group) mRN... 157 2e-35
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 137 2e-29
10dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 137 2e-29
11dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 1e-27
12dbj|AK058779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 1e-27
13dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b m... 131 1e-27
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 113 2e-22
15gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 113 2e-22
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 113 2e-22
17gb|AY108940.1| Zea mays PCO101909 mRNA sequence 103 2e-19
18gb|AY105318.1| Zea mays PCO073117 mRNA sequence 101 9e-19
19ref|NM_127572.2| Arabidopsis thaliana ATP binding / ATPase/ hydr... 86 5e-14
20gb|AY056335.1| Arabidopsis thaliana putative 26S proteasome subu... 86 5e-14
21gb|AY035072.1| Arabidopsis thaliana putative 26S proteasome subu... 86 5e-14
22gb|AF372977.1|AF372977 Arabidopsis thaliana At2g20140/T2G17.6 mR... 86 5e-14
23gb|AY087584.1| Arabidopsis thaliana clone 36815 mRNA, complete s... 86 5e-14
24gb|AY105631.1| Zea mays PCO101908 mRNA sequence 80 3e-12
25gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map... 78 1e-11
26ref|NM_119048.2| Arabidopsis thaliana RPT2A; ATPase AT4G29040 (R... 74 2e-10
27gb|AY034975.1| Arabidopsis thaliana putative 26S proteasome subu... 74 2e-10
28dbj|AB161192.1| Arabidopsis thaliana HLR mRNA for 26S proteasome... 74 2e-10
29gb|AF123391.1|AF123391 Arabidopsis thaliana 26S proteasome AAA-A... 74 2e-10
30dbj|AK058808.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 8e-10
31emb|AJ291500.1|BNA291500 Brassica napus homologue of SPH gene, A... 70 3e-09
32emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ... 66 5e-08
33emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, B... 66 5e-08
34emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, B... 66 5e-08
35gb|DQ222507.1| Solanum tuberosum clone 115D06 26S proteasome sub... 64 2e-07
36emb|BX819727.1|CNS0A8HI Arabidopsis thaliana Full-length cDNA Co... 64 2e-07
37emb|AJ293726.1|BNA293726 Brassica napus homologue of AT4g29030 g... 64 2e-07
38gb|AF432345.1| Tortula ruralis 26S proteasome regulatory subunit... 52 7e-04
39gb|BC071538.1| Danio rerio proteasome (prosome, macropain) 26S s... 50 0.003
40ref|NM_001002091.1| Danio rerio proteasome (prosome, macropain) ... 50 0.003
41emb|AL935145.12| Zebrafish DNA sequence from clone CH211-173B9 i... 50 0.003
42gb|AY639765.1| Hordeum vulgare subsp. spontaneum cultivar PI 560... 42 0.70
43gb|AY639735.1| Hordeum vulgare subsp. spontaneum cultivar PI 466... 42 0.70
44dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.70
45dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.70
46ref|XM_312720.2| Anopheles gambiae str. PEST ENSANGP00000017106 ... 42 0.70
47dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.70
48dbj|AK064913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.70
49dbj|AK060805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.70
50gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 2.8
51ref|NM_079745.2| Drosophila melanogaster Proteasome 26S subunit ... 40 2.8
52gb|AY058759.1| Drosophila melanogaster SD02658 full length cDNA 40 2.8
53gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, r... 40 2.8
54gb|AC154285.2| Mus musculus BAC clone RP23-452P8 from chromosome... 40 2.8
55gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 2.8
56gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83... 40 2.8
57emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11... 40 2.8
58gb|U39303.1|DMU39303 Drosophila melanogaster 26S proteasome subu... 40 2.8
59dbj|AP004941.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 2.8
60emb|AL772261.5| Mouse DNA sequence from clone RP23-276J11 on chr... 40 2.8 
>ref|NM_185558.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1597

 Score =  157 bits (79), Expect = 2e-35
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1438 cacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgcc 1379

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            ||||||||||| || |||||||||||||| | ||| ||||||| ||||||
Sbjct: 1378 ttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaag 1329
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>ref|XM_507415.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA
          Length = 1599

 Score =  157 bits (79), Expect = 2e-35
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1437 cacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgcc 1378

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            ||||||||||| || |||||||||||||| | ||| ||||||| ||||||
Sbjct: 1377 ttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaag 1328
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>ref|XM_506590.2| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.112 mRNA
          Length = 1615

 Score =  157 bits (79), Expect = 2e-35
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1437 cacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgcc 1378

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            ||||||||||| || |||||||||||||| | ||| ||||||| ||||||
Sbjct: 1377 ttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaag 1328
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>dbj|AK105861.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A02, full
            insert sequence
          Length = 1599

 Score =  157 bits (79), Expect = 2e-35
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1437 cacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgcc 1378

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            ||||||||||| || |||||||||||||| | ||| ||||||| ||||||
Sbjct: 1377 ttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaag 1328
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>dbj|AK099264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C04, full
            insert sequence
          Length = 1597

 Score =  157 bits (79), Expect = 2e-35
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1438 cacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgcc 1379

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            ||||||||||| || |||||||||||||| | ||| ||||||| ||||||
Sbjct: 1378 ttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaag 1329
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>dbj|AK070759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065N19, full
           insert sequence
          Length = 947

 Score =  157 bits (79), Expect = 2e-35
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                       
Query: 109 cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 738 cacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgcc 679

                                                             
Query: 169 ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
           ||||||||||| || |||||||||||||| | ||| ||||||| ||||||
Sbjct: 678 ttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaag 629
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>dbj|AK058311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H11, full
            insert sequence
          Length = 1615

 Score =  157 bits (79), Expect = 2e-35
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1437 cacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgcc 1378

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            ||||||||||| || |||||||||||||| | ||| ||||||| ||||||
Sbjct: 1377 ttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaag 1328
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>dbj|D17789.1|RICHTBP2 Oryza sativa (japonica cultivar-group) mRNA for homologue of Tat
            binding protein, complete cds
          Length = 1609

 Score =  157 bits (79), Expect = 2e-35
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1405 cacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgcc 1346

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            ||||||||||| || |||||||||||||| | ||| ||||||| ||||||
Sbjct: 1345 ttcttgaagtcagcatgtgtcaccttcattcggcgttctctcaaagcaag 1296
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  137 bits (69), Expect = 2e-29
 Identities = 81/85 (95%)
 Strand = Plus / Plus

                                                                            
Query: 109      cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
                ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 29382509 cacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgcc 29382568

                                         
Query: 169      ttcttgaagtcggcgtgtgtcacct 193
                ||||||||||| || ||||||||||
Sbjct: 29382569 ttcttgaagtcagcatgtgtcacct 29382593
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score =  137 bits (69), Expect = 2e-29
 Identities = 81/85 (95%)
 Strand = Plus / Plus

                                                                         
Query: 109   cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
             ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 45431 cacatgtaaagaccctccggcacaccttccttcttcttgaacatcaccttctcctttgcc 45490

                                      
Query: 169   ttcttgaagtcggcgtgtgtcacct 193
             ||||||||||| || ||||||||||
Sbjct: 45491 ttcttgaagtcagcatgtgtcacct 45515
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>dbj|AK069811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D05, full
            insert sequence
          Length = 1579

 Score =  131 bits (66), Expect = 1e-27
 Identities = 90/98 (91%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 1430 cacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggcc 1371

                                                  
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctc 206
            |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 1370 ttcttgaaatcggcatgtgtcaccttcattctgcgctc 1333
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>dbj|AK058779.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C01, full
           insert sequence
          Length = 651

 Score =  131 bits (66), Expect = 1e-27
 Identities = 90/98 (91%)
 Strand = Plus / Minus

                                                                       
Query: 109 cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
           ||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 441 cacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggcc 382

                                                 
Query: 169 ttcttgaagtcggcgtgtgtcaccttcatcctgcgctc 206
           |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 381 ttcttgaaatcggcatgtgtcaccttcattctgcgctc 344
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>dbj|AB037154.1| Oryza sativa (japonica cultivar-group) OsRPT2b mRNA for 26S
            proteasome regulatory particle triple-A ATPase subunit2b,
            complete cds
          Length = 1616

 Score =  131 bits (66), Expect = 1e-27
 Identities = 90/98 (91%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 1374 cacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggcc 1315

                                                  
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctc 206
            |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 1314 ttcttgaaatcggcatgtgtcaccttcattctgcgctc 1277
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  113 bits (57), Expect = 2e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                            
Query: 109      cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
                ||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 10437924 cacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggcc 10437865

                                         
Query: 169      ttcttgaagtcggcgtgtgtcacct 193
                |||||||| ||||| ||||||||||
Sbjct: 10437864 ttcttgaaatcggcatgtgtcacct 10437840
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>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score =  113 bits (57), Expect = 2e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                         
Query: 109   cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
             ||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 94477 cacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggcc 94418

                                      
Query: 169   ttcttgaagtcggcgtgtgtcacct 193
             |||||||| ||||| ||||||||||
Sbjct: 94417 ttcttgaaatcggcatgtgtcacct 94393
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  113 bits (57), Expect = 2e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                            
Query: 109      cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
                ||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 10436025 cacatataaagcccttccggtacaccttccttcttcttgaacatgaccttctctttggcc 10435966

                                         
Query: 169      ttcttgaagtcggcgtgtgtcacct 193
                |||||||| ||||| ||||||||||
Sbjct: 10435965 ttcttgaaatcggcatgtgtcacct 10435941
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>gb|AY108940.1| Zea mays PCO101909 mRNA sequence
          Length = 961

 Score =  103 bits (52), Expect = 2e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                       
Query: 110 acatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcct 169
           ||||||| || || ||||| |||||||||||||||||| |||| ||||||||||||||||
Sbjct: 720 acatgtagagaccatccggaacaccttccttcttcttgtacatcaccttctcctttgcct 661

                                                   
Query: 170 tcttgaagtcggcgtgtgtcaccttcatcctgcgctctct 209
           ||||||| || || || ||||||||||| ||||| |||||
Sbjct: 660 tcttgaaatctgcatgggtcaccttcattctgcgttctct 621
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>gb|AY105318.1| Zea mays PCO073117 mRNA sequence
          Length = 866

 Score =  101 bits (51), Expect = 9e-19
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                       
Query: 121 ccctccggcacaccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcg 180
           ||||||||||| ||||| |||||||||||||| ||||| || || |||||||||||||| 
Sbjct: 542 ccctccggcacgccttctttcttcttgaacataaccttttctttggccttcttgaagtct 483

                                                 
Query: 181 gcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
           || || |||||||||||||  |||||||||| ||||||
Sbjct: 482 gcatgcgtcaccttcatccgccgctctctcaaagcaag 445
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>ref|NM_127572.2| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/
            nucleoside-triphosphatase/ nucleotide binding AT2G20140
            mRNA, complete cds
          Length = 1610

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| || || || || ||||| |||||||||||||| ||||||||||| |||
Sbjct: 1367 cacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgcc 1308

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            |||||||||||  | || ||||| |||||||  |||||||| | ||||||
Sbjct: 1307 ttcttgaagtccacatgcgtcactttcatccgacgctctctaagagcaag 1258
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>gb|AY056335.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At2g20140)
            mRNA, complete cds
          Length = 1363

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| || || || || ||||| |||||||||||||| ||||||||||| |||
Sbjct: 1331 cacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgcc 1272

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            |||||||||||  | || ||||| |||||||  |||||||| | ||||||
Sbjct: 1271 ttcttgaagtccacatgcgtcactttcatccgacgctctctaagagcaag 1222
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>gb|AY035072.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At2g20140)
            mRNA, complete cds
          Length = 1586

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| || || || || ||||| |||||||||||||| ||||||||||| |||
Sbjct: 1349 cacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgcc 1290

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            |||||||||||  | || ||||| |||||||  |||||||| | ||||||
Sbjct: 1289 ttcttgaagtccacatgcgtcactttcatccgacgctctctaagagcaag 1240
to top
>gb|AF372977.1|AF372977 Arabidopsis thaliana At2g20140/T2G17.6 mRNA, complete cds
          Length = 1578

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| || || || || ||||| |||||||||||||| ||||||||||| |||
Sbjct: 1354 cacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgcc 1295

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            |||||||||||  | || ||||| |||||||  |||||||| | ||||||
Sbjct: 1294 ttcttgaagtccacatgcgtcactttcatccgacgctctctaagagcaag 1245
to top
>gb|AY087584.1| Arabidopsis thaliana clone 36815 mRNA, complete sequence
          Length = 1478

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                        
Query: 109  cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
            ||||||||||| || || || || ||||| |||||||||||||| ||||||||||| |||
Sbjct: 1357 cacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgcc 1298

                                                              
Query: 169  ttcttgaagtcggcgtgtgtcaccttcatcctgcgctctctcanagcaag 218
            |||||||||||  | || ||||| |||||||  |||||||| | ||||||
Sbjct: 1297 ttcttgaagtccacatgcgtcactttcatccgacgctctctaagagcaag 1248
to top
>gb|AY105631.1| Zea mays PCO101908 mRNA sequence
          Length = 1272

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                       
Query: 110 acatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcct 169
           ||||||| || || ||||| |||||||||||||||||| |||| |||||||||||||| |
Sbjct: 989 acatgtagagaccatccggaacaccttccttcttcttgtacatcaccttctcctttgctt 930

                                       
Query: 170 tcttgaagtcggcgtgtgtcaccttcat 197
           ||||||| || || || ||||| |||||
Sbjct: 929 tcttgaaatctgcatgggtcactttcat 902
to top
>gb|AC006081.4| Arabidopsis thaliana chromosome 2 clone T2G17 map mi148, complete
             sequence
          Length = 97814

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                         
Query: 109   cacatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcc 168
             ||||||||||| || || || || ||||| |||||||||||||| ||||||||||| |||
Sbjct: 23896 cacatgtaaagaccttcaggaactccttctttcttcttgaacataaccttctccttcgcc 23955

                        
Query: 169   ttcttgaagtc 179
             |||||||||||
Sbjct: 23956 ttcttgaagtc 23966
to top
>ref|NM_119048.2| Arabidopsis thaliana RPT2A; ATPase AT4G29040 (RPT2A) mRNA, complete
            cds
          Length = 1574

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 133  ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 192
            ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 1373 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1314

                 
Query: 193  ttcat 197
            |||||
Sbjct: 1313 ttcat 1309
to top
>gb|AY034975.1| Arabidopsis thaliana putative 26S proteasome subunit 4 (At4g29040)
            mRNA, complete cds
          Length = 1590

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 133  ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 192
            ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 1373 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1314

                 
Query: 193  ttcat 197
            |||||
Sbjct: 1313 ttcat 1309
to top
>dbj|AB161192.1| Arabidopsis thaliana HLR mRNA for 26S proteasome subunit AtRPT2a,
            complete cds
          Length = 1574

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 133  ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 192
            ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 1373 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1314

                 
Query: 193  ttcat 197
            |||||
Sbjct: 1313 ttcat 1309
to top
>gb|AF123391.1|AF123391 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT2a (RPT2a)
            mRNA, complete cds
          Length = 1568

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 133  ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 192
            ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 1372 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 1313

                 
Query: 193  ttcat 197
            |||||
Sbjct: 1312 ttcat 1308
to top
>dbj|AK058808.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-C05, full
           insert sequence
          Length = 251

 Score = 71.9 bits (36), Expect = 8e-10
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 109 cacatgtaaagcccctccggcacaccttccttcttcttga 148
           ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 47  cacatgtaaagaccctccggcacaccttccttcttcttga 8
to top
>emb|AJ291500.1|BNA291500 Brassica napus homologue of SPH gene, AT4g29040 gene and AT4g29100
            gene, clone SI13
          Length = 14775

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                        
Query: 110  acatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcct 169
            |||||||||| || || || |||||||| ||||| |||||||| |||||||||||||| |
Sbjct: 4232 acatgtaaaggccttcaggaacaccttctttctttttgaacataaccttctcctttgctt 4173

                   
Query: 170  tcttgaa 176
            |||||||
Sbjct: 4172 tcttgaa 4166
to top
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 133   ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 192
             ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 42441 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 42382

              
Query: 193   t 193
             |
Sbjct: 42381 t 42381
to top
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project)
          Length = 97714

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 133   ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 192
             ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 67472 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 67413

              
Query: 193   t 193
             |
Sbjct: 67412 t 67412
to top
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project)
          Length = 101679

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 133   ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 192
             ||||| |||||||||||||| |||||||||||||| |||||||| || |  |||||||||
Sbjct: 25968 ccttctttcttcttgaacataaccttctcctttgctttcttgaaatcaggatgtgtcacc 25909

              
Query: 193   t 193
             |
Sbjct: 25908 t 25908
to top
>gb|DQ222507.1| Solanum tuberosum clone 115D06 26S proteasome subunit 4-like mRNA,
            complete cds
          Length = 1581

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                        
Query: 110  acatgtaaagcccctccggcacaccttccttcttcttgaacatgaccttctcctttgcct 169
            |||||||||| || || ||||| || || |||||||||||||| ||||| || |||||||
Sbjct: 1370 acatgtaaagtccttctggcactccctctttcttcttgaacatcaccttatcttttgcct 1311

                                        
Query: 170  tcttgaagtcggcgtgtgtcaccttcat 197
            ||||||| || || ||  ||||||||||
Sbjct: 1310 tcttgaaatctgcatgaatcaccttcat 1283
to top
>emb|BX819727.1|CNS0A8HI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS20ZD02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1465

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 74/87 (85%), Gaps = 1/87 (1%)
 Strand = Plus / Minus

                                                                        
Query: 133  ccttccttcttcttgaac-atgaccttctcctttgccttcttgaagtcggcgtgtgtcac 191
            ||||| |||||||||||| || ||||||||||| ||||||||||||||  | || |||||
Sbjct: 1349 ccttctttcttcttgaactataaccttctccttcgccttcttgaagtccacatgcgtcac 1290

                                       
Query: 192  cttcatcctgcgctctctcanagcaag 218
             |||||||  |||||||| | ||||||
Sbjct: 1289 tttcatccgacgctctctaagagcaag 1263
to top
>emb|AJ293726.1|BNA293726 Brassica napus homologue of AT4g29030 gene, homologue of SPH gene,
             homologue of AT4g29040 gene (pseudogene) and homologue of
             AT4g29060 gene (pseudogene, partial)
          Length = 15378

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 133   ccttccttcttcttgaacatgaccttctcctttgccttcttgaa 176
             ||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct: 12811 ccttctttcttcttgaacataaccttctcctttgctttcttgaa 12768
to top
>gb|AF432345.1| Tortula ruralis 26S proteasome regulatory subunit IV (RPT2) mRNA,
            complete cds
          Length = 1845

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 133  ccttccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcacc 192
            ||||||||||||||  |||| || ||||| || |||||||| || || ||||| ||||||
Sbjct: 1502 ccttccttcttcttatacatcactttctctttggccttcttaaaatcagcgtgcgtcacc 1443

                          
Query: 193  ttcatcctgcgctc 206
            ||||| | ||||||
Sbjct: 1442 ttcatacggcgctc 1429
to top
>gb|BC071538.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 1b,
            mRNA (cDNA clone MGC:86923 IMAGE:6905970), complete cds
          Length = 1521

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 136  tccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcaccttc 195
            |||| ||||||| |||  || |||||||| | ||||||||||||  |||  || ||||||
Sbjct: 1322 tcctgcttcttgtacagcacattctccttagacttcttgaagtcctcgttggtgaccttc 1263

                         
Query: 196  atcctgcgctctc 208
            |||||||||||||
Sbjct: 1262 atcctgcgctctc 1250
to top
>ref|NM_001002091.1| Danio rerio proteasome (prosome, macropain) 26S subunit, ATPase, 1b
            (psmc1b), mRNA
          Length = 1521

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 136  tccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcaccttc 195
            |||| ||||||| |||  || |||||||| | ||||||||||||  |||  || ||||||
Sbjct: 1322 tcctgcttcttgtacagcacattctccttagacttcttgaagtcctcgttggtgaccttc 1263

                         
Query: 196  atcctgcgctctc 208
            |||||||||||||
Sbjct: 1262 atcctgcgctctc 1250
to top
>emb|AL935145.12| Zebrafish DNA sequence from clone CH211-173B9 in linkage group 20,
             complete sequence
          Length = 157156

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                         
Query: 136   tccttcttcttgaacatgaccttctcctttgccttcttgaagtcggcgtgtgtcaccttc 195
             |||| ||||||| |||  || |||||||| | ||||||||||||  |||  || ||||||
Sbjct: 43787 tcctgcttcttgtacagcacattctccttagacttcttgaagtcctcgttggtgaccttc 43846

                          
Query: 196   atcctgcgctctc 208
             |||||||||||||
Sbjct: 43847 atcctgcgctctc 43859
to top
>gb|AY639765.1| Hordeum vulgare subsp. spontaneum cultivar PI 560558 FtsH-like
           protein gene, partial cds
          Length = 456

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 157 ttctcctttgccttcttgaag 177
           |||||||||||||||||||||
Sbjct: 333 ttctcctttgccttcttgaag 313
to top
>gb|AY639735.1| Hordeum vulgare subsp. spontaneum cultivar PI 466252 FtsH-like
           protein gene, partial cds
          Length = 459

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 157 ttctcctttgccttcttgaag 177
           |||||||||||||||||||||
Sbjct: 337 ttctcctttgccttcttgaag 317
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 157      ttctcctttgccttcttgaag 177
                |||||||||||||||||||||
Sbjct: 27342892 ttctcctttgccttcttgaag 27342912
to top
>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0686E06
          Length = 150474

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   ttctcctttgccttcttgaag 177
             |||||||||||||||||||||
Sbjct: 85719 ttctcctttgccttcttgaag 85739
to top
>ref|XM_312720.2| Anopheles gambiae str. PEST ENSANGP00000017106 (ENSANGG00000014617),
            partial mRNA
          Length = 1317

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 158  tctcctttgccttcttgaagtcggcgtgtgtcaccttcatcctgcgctc 206
            ||||||||| ||||||||||||  |||  ||||||||||| | ||||||
Sbjct: 1267 tctcctttgacttcttgaagtcctcgttggtcaccttcattcggcgctc 1219
to top
>dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G24, full
           insert sequence
          Length = 2183

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 157 ttctcctttgccttcttgaag 177
           |||||||||||||||||||||
Sbjct: 920 ttctcctttgccttcttgaag 900
to top
>dbj|AK064913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M12, full
            insert sequence
          Length = 2433

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 157  ttctcctttgccttcttgaag 177
            |||||||||||||||||||||
Sbjct: 1170 ttctcctttgccttcttgaag 1150
to top
>dbj|AK060805.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F12, full
           insert sequence
          Length = 2276

 Score = 42.1 bits (21), Expect = 0.70
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 157 ttctcctttgccttcttgaag 177
           |||||||||||||||||||||
Sbjct: 980 ttctcctttgccttcttgaag 960
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 134     cttccttcttcttgaacatg 153
               ||||||||||||||||||||
Sbjct: 3367224 cttccttcttcttgaacatg 3367205



 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 134     cttccttcttcttgaacatg 153
               ||||||||||||||||||||
Sbjct: 1614347 cttccttcttcttgaacatg 1614328
to top
>ref|NM_079745.2| Drosophila melanogaster Proteasome 26S subunit subunit 4 ATPase
            CG5289-RA (Pros26.4), mRNA
          Length = 1631

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 158  tctcctttgccttcttgaagtcggcgtgtgtcaccttcat 197
            ||||||||| ||||||||||||  |||  |||||||||||
Sbjct: 1469 tctcctttgacttcttgaagtcctcgttggtcaccttcat 1430
to top
>gb|AY058759.1| Drosophila melanogaster SD02658 full length cDNA
          Length = 1493

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 158  tctcctttgccttcttgaagtcggcgtgtgtcaccttcat 197
            ||||||||| ||||||||||||  |||  |||||||||||
Sbjct: 1353 tctcctttgacttcttgaagtcctcgttggtcaccttcat 1314
to top
>gb|AC007929.8|AC007929 Drosophila melanogaster, chromosome 3R, region 95A-95C, BAC clone
             BACR05C11, complete sequence
          Length = 171376

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 158   tctcctttgccttcttgaagtcggcgtgtgtcaccttcat 197
             ||||||||| ||||||||||||  |||  |||||||||||
Sbjct: 95430 tctcctttgacttcttgaagtcctcgttggtcaccttcat 95469
to top
>gb|AC154285.2| Mus musculus BAC clone RP23-452P8 from chromosome 16, complete sequence
          Length = 183796

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    cttccttcttcttgaacatg 153
              ||||||||||||||||||||
Sbjct: 157914 cttccttcttcttgaacatg 157933
to top
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 12      gcgcctatccgcccaaccag 31
               ||||||||||||||||||||
Sbjct: 1386504 gcgcctatccgcccaaccag 1386523
to top
>gb|AE003745.4| Drosophila melanogaster chromosome 3R, section 83 of 118 of the complete
              sequence
          Length = 230236

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 158    tctcctttgccttcttgaagtcggcgtgtgtcaccttcat 197
              ||||||||| ||||||||||||  |||  |||||||||||
Sbjct: 128322 tctcctttgacttcttgaagtcctcgttggtcaccttcat 128361
to top
>emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11, COMPLETE SEQUENCE
          Length = 107624

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   accttccttcttcttgaaca 151
             ||||||||||||||||||||
Sbjct: 91969 accttccttcttcttgaaca 91988
to top
>gb|U39303.1|DMU39303 Drosophila melanogaster 26S proteasome subunit 4 ATPase mRNA,
            complete cds
          Length = 1497

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 158  tctcctttgccttcttgaagtcggcgtgtgtcaccttcat 197
            ||||||||| ||||||||||||  |||  |||||||||||
Sbjct: 1376 tctcctttgacttcttgaagtcctcgttggtcaccttcat 1337
to top
>dbj|AP004941.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT25N10, TM0109,
             complete sequence
          Length = 75234

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    cccacgatacccaatatatt 60
             ||||||||||||||||||||
Sbjct: 50294 cccacgatacccaatatatt 50275
to top
>emb|AL772261.5| Mouse DNA sequence from clone RP23-276J11 on chromosome 4, complete
              sequence
          Length = 191041

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    ccttcatcctgcgctctctc 210
              ||||||||||||||||||||
Sbjct: 106398 ccttcatcctgcgctctctc 106417


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,773,065
Number of Sequences: 3902068
Number of extensions: 1773065
Number of successful extensions: 154474
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 154216
Number of HSP's gapped (non-prelim): 257
length of query: 218
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 196
effective length of database: 17,147,199,772
effective search space: 3360851155312
effective search space used: 3360851155312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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