ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart07e12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 222 bits (112), Expect = 7e-55 Identities = 163/180 (90%) Strand = Plus / Minus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 759 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 700 Query: 294 aaccagggcggcgatggcggcgccggcaaaggggccgagccagtacacccagtggttctc 353 | || |||||||||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct: 699 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 640 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 639 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 580
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 222 bits (112), Expect = 7e-55 Identities = 163/180 (90%) Strand = Plus / Plus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 43108668 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 43108727 Query: 294 aaccagggcggcgatggcggcgccggcaaaggggccgagccagtacacccagtggttctc 353 | || |||||||||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct: 43108728 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 43108787 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 43108788 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 43108847 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 322 aaggggccgagccagtacacccagtggt 349 ||||| |||||||||||||||||||||| Sbjct: 6644943 aagggaccgagccagtacacccagtggt 6644970 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttctcaatctctcatggcgat 195 ||||||||||||||||||||| Sbjct: 3810439 ttctcaatctctcatggcgat 3810419 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ggcggcgccggcaaaggggc 328 |||||||||||||||||||| Sbjct: 20398464 ggcggcgccggcaaaggggc 20398483 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 376 gggccgaaggagacggcggggttcatggacgcgccg 411 |||||||||||| ||| ||||||||||| |||||| Sbjct: 7297471 gggccgaaggagcgggccgggttcatggaggcgccg 7297436
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 222 bits (112), Expect = 7e-55 Identities = 163/180 (90%) Strand = Plus / Plus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 105697 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 105756 Query: 294 aaccagggcggcgatggcggcgccggcaaaggggccgagccagtacacccagtggttctc 353 | || |||||||||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct: 105757 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 105816 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105817 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 105876
>dbj|AK111768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066H10, full insert sequence Length = 1346 Score = 222 bits (112), Expect = 7e-55 Identities = 163/180 (90%) Strand = Plus / Minus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 783 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 724 Query: 294 aaccagggcggcgatggcggcgccggcaaaggggccgagccagtacacccagtggttctc 353 | || |||||||||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct: 723 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 664 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 663 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 604
>dbj|AK111747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B20, full insert sequence Length = 1149 Score = 222 bits (112), Expect = 7e-55 Identities = 163/180 (90%) Strand = Plus / Minus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 832 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 773 Query: 294 aaccagggcggcgatggcggcgccggcaaaggggccgagccagtacacccagtggttctc 353 | || |||||||||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct: 772 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 713 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 712 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 653
>dbj|AB114829.1| Oryza sativa (japonica cultivar-group) OsTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 970 Score = 222 bits (112), Expect = 7e-55 Identities = 163/180 (90%) Strand = Plus / Minus Query: 234 tcagtactcggcggtggggagctgctcgtgcgggcgctggccgatgaagcagatgtcgta 293 |||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 769 tcagtagtcggcggtgggcagctggtcgtgcgggcgctggccgatgaagatgatgtcgta 710 Query: 294 aaccagggcggcgatggcggcgccggcaaaggggccgagccagtacacccagtggttctc 353 | || |||||||||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct: 709 gatgagcgcggcgatggcggcgccgacgaaggggccgagccagtagacccagtggttgtc 650 Query: 354 ccagacgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 649 ccagactccggtgacgacggcggggccgaaggagacggcggggttcatggaggcgccgtc 590
>gb|AF326500.1|AF326500 Zea mays tonoplast membrane integral protein ZmTIP1-2 mRNA, complete cds Length = 1021 Score = 168 bits (85), Expect = 9e-39 Identities = 142/161 (88%) Strand = Plus / Minus Query: 253 agctgctcgtgcgggcgctggccgatgaagcagatgtcgtaaaccagggcggcgatggcg 312 ||||||| ||| |||||||| ||||||||| ||||||||| || || || |||||||| Sbjct: 754 agctgctggtgtgggcgctgcccgatgaagatgatgtcgtagacgagcgccgcgatggcc 695 Query: 313 gcgccggcaaaggggccgagccagtacacccagtggttctcccagacgccgctgaccacg 372 ||||| || | ||||||| ||||||||||||||||||||||||||||||| |||| ||| Sbjct: 694 gcgcccgcgagtgggccgacccagtacacccagtggttctcccagacgccggtgacgacg 635 Query: 373 gcggggccgaaggagacggcggggttcatggacgcgccgtc 413 || ||||||||||||||||||||||||||||| |||||||| Sbjct: 634 gccgggccgaaggagacggcggggttcatggaggcgccgtc 594
>gb|AY112388.1| Zea mays CL24208_1 mRNA sequence Length = 833 Score = 139 bits (70), Expect = 8e-30 Identities = 126/145 (86%) Strand = Plus / Plus Query: 269 gctggccgatgaagcagatgtcgtaaaccagggcggcgatggcggcgccggcaaaggggc 328 |||| ||||||||| ||||||||| || || || |||||||| ||||| || | |||| Sbjct: 273 gctgcccgatgaagatgatgtcgtagacgagcgccgcgatggccgcgcccgcgagtgggc 332 Query: 329 cgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggaga 388 ||| ||||||||||||||||||||||||||||||| |||| || || ||||||||||||| Sbjct: 333 cgacccagtacacccagtggttctcccagacgccggtgacgacagccgggccgaaggaga 392 Query: 389 cggcggggttcatggacgcgccgtc 413 |||||| ||||||||| |||||||| Sbjct: 393 cggcggngttcatggaggcgccgtc 417
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 324 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 383 |||||||| |||||||||||| |||| | |||| | | |||||| | |||||||||||| Sbjct: 729 ggggccgacccagtacacccactggtacccccactcccagctgacgagggcggggccgaa 670 Query: 384 ggagacggcggggttcatggacgcgccg 411 |||||||||||||||||||||||||||| Sbjct: 669 ggagacggcggggttcatggacgcgccg 642 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 814 agtagtcggtggtggggagctgctcgtg 787
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 324 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 383 |||||||| |||||||||||| |||| | |||| | | |||||| | |||||||||||| Sbjct: 760 ggggccgacccagtacacccactggtacccccactcccagctgacgagggcggggccgaa 701 Query: 384 ggagacggcggggttcatggacgcgccg 411 |||||||||||||||||||||||||||| Sbjct: 700 ggagacggcggggttcatggacgcgccg 673 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 234 tcagtactcggcggtggggagctgctcgtg 263 |||||| |||| |||||||||||||||||| Sbjct: 847 tcagtagtcggtggtggggagctgctcgtg 818
>gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds Length = 1039 Score = 83.8 bits (42), Expect = 4e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 324 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 383 |||||||| |||||||||||| |||| |||| | | |||||| | |||||||||||| Sbjct: 667 ggggccgacccagtacacccactggtagccccactcccagctgacgagggcggggccgaa 608 Query: 384 ggagacggcggggttcatggacgcgccgtc 413 ||| |||||||||||||||||||||||||| Sbjct: 607 ggacacggcggggttcatggacgcgccgtc 578
>gb|AY104464.1| Zea mays PCO114899 mRNA sequence Length = 1167 Score = 83.8 bits (42), Expect = 4e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 324 ggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaa 383 |||||||| |||||||||||| |||| |||| | | |||||| | |||||||||||| Sbjct: 762 ggggccgacccagtacacccactggtagccccactcccagctgacgagggcggggccgaa 703 Query: 384 ggagacggcggggttcatggacgcgccgtc 413 ||| |||||||||||||||||||||||||| Sbjct: 702 ggacacggcggggttcatggacgcgccgtc 673
>emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic protein (TIP) Length = 1146 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 384 ||||||| |||||||||||||||||| | |||| | |||||| | | |||||||||| Sbjct: 744 gggccgacccagtacacccagtggttgttccaggaccagctgacgagcgaggggccgaag 685 Query: 385 gagacggcggggttcatggacgcgccgtc 413 || |||||||||||||||||||||||||| Sbjct: 684 gacacggcggggttcatggacgcgccgtc 656 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 833 agtagtcggtggtggggagctgctcgtg 806
>gb|BT016300.1| Zea mays clone Contig133 mRNA sequence Length = 1112 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 363 gctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 724 gctgacgagggcggggccgaaggacacggcggggttcatggacgcgccgtc 674
>gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds Length = 1097 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 363 gctgaccacggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 |||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 720 gctgacgagggcggggccgaaggacacggcggggttcatggacgcgccgtc 670
>ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 657 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 598 Query: 393 ggggttcatggacgcgccgtc 413 ||||||||||| |||||||| Sbjct: 597 cgggttcatggaggcgccgtc 577 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 751 agtagtcggtggtggggagctgctcgtg 724
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 2544825 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 2544884 Query: 393 ggggttcatggacgcgccgtc 413 ||||||||||| |||||||| Sbjct: 2544885 cgggttcatggaggcgccgtc 2544905 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 2544731 agtagtcggtggtggggagctgctcgtg 2544758
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 125269 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 125210 Query: 393 ggggttcatggacgcgccgtc 413 ||||||||||| |||||||| Sbjct: 125209 cgggttcatggaggcgccgtc 125189 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 125363 agtagtcggtggtggggagctgctcgtg 125336
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 2544935 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 2544994 Query: 393 ggggttcatggacgcgccgtc 413 ||||||||||| |||||||| Sbjct: 2544995 cgggttcatggaggcgccgtc 2545015 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 2544841 agtagtcggtggtggggagctgctcgtg 2544868
>dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds Length = 1080 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 735 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 676 Query: 393 ggggttcatggacgcgccgtc 413 ||||||||||| |||||||| Sbjct: 675 cgggttcatggaggcgccgtc 655 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 829 agtagtcggtggtggggagctgctcgtg 802
>dbj|AK110727.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E06, full insert sequence Length = 1024 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 234 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 293 Query: 393 ggggttcatggacgcgccgtc 413 ||||||||||| |||||||| Sbjct: 294 cgggttcatggaggcgccgtc 314 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 182 agtagtcggtggtggggagctgctcgtg 209
>dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full insert sequence Length = 1034 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 744 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 685 Query: 393 ggggttcatggacgcgccgtc 413 ||||||||||| |||||||| Sbjct: 684 cgggttcatggaggcgccgtc 664 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 838 agtagtcggtggtggggagctgctcgtg 811
>dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full insert sequence Length = 1082 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 746 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 687 Query: 393 ggggttcatggacgcgccgtc 413 ||||||||||| |||||||| Sbjct: 686 cgggttcatggaggcgccgtc 666 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 840 agtagtcggtggtggggagctgctcgtg 813
>dbj|AK059438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G11, full insert sequence Length = 551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 270 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 211 Query: 393 ggggttcatggacgcgccgtc 413 ||||||||||| |||||||| Sbjct: 210 cgggttcatggaggcgccgtc 190 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 364 agtagtcggtggtggggagctgctcgtg 337
>dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full insert sequence Length = 1055 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||||||||| ||| ||||||| | |||||| | ||| ||||||||||||||||| Sbjct: 742 ccagtacacccactgggactcccaggaccagctgacgagggccgggccgaaggagacggc 683 Query: 393 ggggttcatggacgcgccgtc 413 ||||||||||| |||||||| Sbjct: 682 cgggttcatggaggcgccgtc 662 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 836 agtagtcggtggtggggagctgctcgtg 809
>ref|NM_197137.1| Oryza sativa (japonica cultivar-group) putative beta-tonoplast intrinsic protein (OSJNBa0051D19.19), mRNA Length = 1186 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcaaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| | |||||||||||||||||||||||||||| Sbjct: 854 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 807
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcaaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| | |||||||||||||||||||||||||||| Sbjct: 26109 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 26156
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcaaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| | |||||||||||||||||||||||||||| Sbjct: 18187019 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 18186972
>dbj|AK111931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C03, full insert sequence Length = 1200 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcaaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| | |||||||||||||||||||||||||||| Sbjct: 863 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 816
>dbj|AB114828.1| Oryza sativa (japonica cultivar-group) OsTIP3 mRNA for tonoplast intrinsic protein, complete cds Length = 1178 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcaaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| | |||||||||||||||||||||||||||| Sbjct: 846 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 799
>dbj|AK106383.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E03, full insert sequence Length = 1787 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 302 cggcgatggcggcgccggcaaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| | |||||||||||||||||||||||||||| Sbjct: 140 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 187
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 302 cggcgatggcggcgccggcaaaggggccgagccagtacacccagtggt 349 |||||| | |||||||| | |||||||||||||||||||||||||||| Sbjct: 18196272 cggcgaggccggcgccgacgaaggggccgagccagtacacccagtggt 18196225
>emb|AJ289866.2|VVI289866 Vitis vinifera mRNA for putative aquaporin (delta-TIP gene) Length = 1017 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcat 401 |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 628 cgccgctgacgacggcggggccgaaggagcgggcggggttcat 586
>gb|AF271661.1|AF271661 Vitis berlandieri x Vitis rupestris putative aquaporin TIP1 (TIP1) mRNA, complete cds Length = 1057 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcat 401 |||||||||| |||||||||||||||||| |||||||||||| Sbjct: 670 cgccgctgacgacggcggggccgaaggagcgggcggggttcat 628
>ref|NM_189871.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 56.0 bits (28), Expect = 9e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 322 aaggggccgagccagtacacccagtggt 349 |||||||||||||||||||||||||||| Sbjct: 491 aaggggccgagccagtacacccagtggt 464
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 9e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 322 aaggggccgagccagtacacccagtggt 349 |||||||||||||||||||||||||||| Sbjct: 25641798 aaggggccgagccagtacacccagtggt 25641825
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 56.0 bits (28), Expect = 9e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 322 aaggggccgagccagtacacccagtggt 349 |||||||||||||||||||||||||||| Sbjct: 95771 aaggggccgagccagtacacccagtggt 95798
>gb|AF326509.1|AF326509 Zea mays tonoplast membrane integral protein ZmTIP5-1 mRNA, complete cds Length = 1021 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 360 gccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgcc 410 ||||||||| ||||| |||||||| ||| ||| ||||||||||||||||| Sbjct: 712 gccgctgacgacggccgggccgaacgagcgggccgggttcatggacgcgcc 662
>gb|AF326508.1|AF326508 Zea mays tonoplast membrane integral protein ZmTIP4-4 mRNA, complete cds Length = 955 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 373 gcggggccgaaggagacggcggggttcatggacgcgccg 411 ||||||||||||||| ||||||||||||||||||||| Sbjct: 708 gcggggccgaaggagcgcgcggggttcatggacgcgccg 670
>gb|AF326506.1|AF326506 Zea mays tonoplast membrane integral protein ZmTIP4-2 mRNA, complete cds Length = 1255 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 384 ||||||| |||||| ||||||||||| |||||| ||| || ||| |||||| |||||| Sbjct: 812 gggccgatccagtagacccagtggttggtccagaccccggtggccatggcgggaccgaag 753 Query: 385 gagacggcggggttcatggacgcgccg 411 || || |||||||||||||||||| Sbjct: 752 gaccgcgccgggttcatggacgcgccg 726
>gb|AF326505.1|AF326505 Zea mays tonoplast membrane integral protein ZmTIP4-1 mRNA, complete cds Length = 1125 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaag 384 ||||||| |||||| ||||||||||| |||| | ||| || ||| ||| ||||||||| Sbjct: 813 gggccgatccagtagacccagtggtttgtccagtccccggtggccagggccgggccgaag 754 Query: 385 gagacggcggggttcatggacgcgccg 411 ||| || |||||||||||||||||| Sbjct: 753 gagcgtgccgggttcatggacgcgccg 727
>gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA, complete cds Length = 1073 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||||| ||||||||||||||| Sbjct: 684 acggcggggccgaaggagcgggcggggttcatgga 650
>gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral protein ZmTIP2-1 mRNA, complete cds Length = 1110 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||||| ||||||||||||||| Sbjct: 841 acggcggggccgaaggagcgggcggggttcatgga 807
>gb|AY105015.1| Zea mays PCO137646 mRNA sequence Length = 1238 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||||| ||||||||||||||| Sbjct: 840 acggcggggccgaaggagcgggcggggttcatgga 806
>dbj|AB048248.1| Pyrus communis Py-gTIP mRNA for gamma tonoplast intrinsic protein, complete cds Length = 1122 Score = 52.0 bits (26), Expect = 0.001 Identities = 67/81 (82%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 |||||| |||||||||||||||||| | ||| |||| || || ||||| || ||||| Sbjct: 731 ccagtagacccagtggttctcccagctccagctcaccaacgccggcccgaangaaacggc 672 Query: 393 ggggttcatggacgcgccgtc 413 |||||||||||||| ||||| Sbjct: 671 cgggttcatggacgctccgtc 651
>gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA, complete cds Length = 829 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccg 411 |||||||| | |||||||||||||||||| || |||||||||||| ||||| Sbjct: 676 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccg 624
>gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA, complete cds Length = 853 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccg 411 |||||||| | |||||||||||||||||| || |||||||||||| ||||| Sbjct: 679 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccg 627
>gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA, complete cds Length = 817 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccg 411 |||||||| | |||||||||||||||||| || |||||||||||| ||||| Sbjct: 680 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccg 628
>gb|AY243804.1| Zea mays tonoplast water channel mRNA, complete cds Length = 968 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 368 ccacggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||||||| ||| ||||||||||| Sbjct: 619 ccacggcggggccgaaggagcgggccgggttcatgga 583 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttca 400 |||||| ||||||||| |||||||||||||| Sbjct: 278 acggcgaggccgaaggtgacggcggggttca 248
>gb|AF326503.1|AF326503 Zea mays tonoplast membrane integral protein ZmTIP2-3 mRNA, complete cds Length = 1042 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 368 ccacggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||||||| ||| ||||||||||| Sbjct: 687 ccacggcggggccgaaggagcgggccgggttcatgga 651 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttca 400 |||||| ||||||||| |||||||||||||| Sbjct: 346 acggcgaggccgaaggtgacggcggggttca 316
>gb|AY106931.1| Zea mays PCO140073 mRNA sequence Length = 1069 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 368 ccacggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||||||| ||| ||||||||||| Sbjct: 696 ccacggcggggccgaaggagcgggccgggttcatgga 660 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttca 400 |||||| ||||||||| |||||||||||||| Sbjct: 355 acggcgaggccgaaggtgacggcggggttca 325
>gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA, complete cds Length = 1067 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatggacgcgccg 411 |||||||| | |||||||||||||||||| || |||||||||||| ||||| Sbjct: 682 cgccgctggcaacggcggggccgaaggagcgtgcagggttcatggacccgccg 630
>gb|AF057183.1|AF057183 Zea mays putative tonoplast aquaporin mRNA, complete cds Length = 1060 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 368 ccacggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||||||| ||| ||||||||||| Sbjct: 678 ccacggcggggccgaaggagcgggccgggttcatgga 642 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttca 400 |||||| ||||||||| |||||||||||||| Sbjct: 337 acggcgaggccgaaggtgacggcggggttca 307
>gb|AY626938.1| Sparus aurata aquaporin 1-like mRNA, complete cds Length = 1015 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 331 agccagtacacccagtggttctcc 354 |||||||||||||||||||||||| Sbjct: 646 agccagtacacccagtggttctcc 623
>ref|NM_188505.1| Oryza sativa (japonica cultivar-group), Ozsa8174 predicted mRNA Length = 969 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 322 aaggggccgagccagtacacccagtggt 349 ||||| |||||||||||||||||||||| Sbjct: 860 aagggaccgagccagtacacccagtggt 833
>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence Length = 136866 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 322 aaggggccgagccagtacacccagtggt 349 |||||||||||| ||||||||||||||| Sbjct: 82936 aaggggccgagctagtacacccagtggt 82909
>gb|AF521135.1| Kandelia candel tonoplast intrinsic protein (TIP) mRNA, complete cds Length = 1099 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctccca 356 |||||||||||||||||||||||| Sbjct: 758 ccagtacacccagtggttctccca 735 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gcggtggggagctgctcgtg 263 |||||||||||||||||||| Sbjct: 847 gcggtggggagctgctcgtg 828
>gb|AF521142.1| Kandelia candel tonoplast intrinsic protein mRNA, partial cds Length = 175 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctccca 356 |||||||||||||||||||||||| Sbjct: 164 ccagtacacccagtggttctccca 141
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 322 aaggggccgagccagtacacccagtggt 349 |||||||||||| ||||||||||||||| Sbjct: 1762720 aaggggccgagctagtacacccagtggt 1762693 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 13251014 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 13250969 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 28065834 ggcggcgatggcggcgccgg 28065853 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 28023111 ggcggcgatggcggcgccgg 28023092
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 322 aaggggccgagccagtacacccagtggt 349 ||||| |||||||||||||||||||||| Sbjct: 125114 aagggaccgagccagtacacccagtggt 125141
>gb|AF133531.1|AF133531 Mesembryanthemum crystallinum water channel protein MipI (MipI) mRNA, complete cds Length = 1035 Score = 48.1 bits (24), Expect = 0.023 Identities = 80/96 (83%), Gaps = 2/96 (2%) Strand = Plus / Minus Query: 319 gcaaaggggccgagccagtacacccagtggttctccca-gacgccgctgaccacggcggg 377 ||||| || ||||||||||| ||||||||||| | ||| ||| | |||||| || || || Sbjct: 744 gcaaatggtccgagccagtagacccagtggttgttccatgac-cagctgacaacagcagg 686 Query: 378 gccgaaggagacggcggggttcatggacgcgccgtc 413 ||||||||| || || ||||||||||| || ||||| Sbjct: 685 gccgaaggacactgcagggttcatggatgcaccgtc 650
>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 322 aaggggccgagccagtacacccagtggt 349 |||||||||||| ||||||||||||||| Sbjct: 87869 aaggggccgagctagtacacccagtggt 87842
>gb|U92651.2|BOU92651 Brassica oleracea var. botrytis tonoplast intrinsic protein bobTIP26-1 mRNA, complete cds Length = 942 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Minus Query: 233 ttcagtactcggcggtggggagctgctcgtg 263 ||||||| ||||||||||||||||| ||||| Sbjct: 793 ttcagtagtcggcggtggggagctgttcgtg 763
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 371 cggcggggccgaaggagacggcg 393 ||||||||||||||||||||||| Sbjct: 8461222 cggcggggccgaaggagacggcg 8461200 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 372 ggcggggccgaaggagacggcg 393 |||||||||||||||||||||| Sbjct: 8473737 ggcggggccgaaggagacggcg 8473716
>gb|AF326507.1|AF326507 Zea mays tonoplast membrane integral protein ZmTIP4-3 mRNA, complete cds Length = 1045 Score = 46.1 bits (23), Expect = 0.090 Identities = 65/79 (82%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctcccagacgccgctgaccacggcggggccgaaggagacggc 392 ||||||||||||||||| | ||||||||| | | |||||||| |||||||| ||| Sbjct: 753 ccagtacacccagtggtgcgtccagacgcccgaggcgacggcgggcccgaaggacctggc 694 Query: 393 ggggttcatggacgcgccg 411 ||||||||||| |||||| Sbjct: 693 cgggttcatggaggcgccg 675
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 371 cggcggggccgaaggagacggcg 393 ||||||||||||||||||||||| Sbjct: 8461105 cggcggggccgaaggagacggcg 8461083 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 372 ggcggggccgaaggagacggcg 393 |||||||||||||||||||||| Sbjct: 8473620 ggcggggccgaaggagacggcg 8473599
>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146444 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 371 cggcggggccgaaggagacggcg 393 ||||||||||||||||||||||| Sbjct: 67885 cggcggggccgaaggagacggcg 67863 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 372 ggcggggccgaaggagacggcg 393 |||||||||||||||||||||| Sbjct: 80400 ggcggggccgaaggagacggcg 80379
>gb|BT012976.1| Lycopersicon esculentum clone 114187R, mRNA sequence Length = 972 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Minus Query: 320 caaaggggccgagccagtacacccagtggttctcccag 357 |||| ||||||||||| || ||||||||||| |||||| Sbjct: 724 caaatgggccgagccaatagacccagtggttgtcccag 687
>emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P3 on chromosome 10 Contains a novel gene, the 5' end of the TCF8 gene for transcription factor 8 (represses interleukin 2 expression) (BZP,ZEB,ZEB1,AREB6,ZFHEP,NIL-2A,ZFHX1A,NIL-2-A), a pseudogene similar to part of serine palmitoyltransferase, long chain base subunit 1 (SPTLC1) (HSAN, HSN1, LBC1, LCB1, SPT1, SPTI) and two CpG islands, complete sequence Length = 187517 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 cacacacagtttaccctgaatt 106 |||||||||||||||||||||| Sbjct: 184855 cacacacagtttaccctgaatt 184834
>gb|AF367456.1| Prunus persica clone gTip1 gamma-tonoplast intrinsic protein mRNA, partial cds Length = 408 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Minus Query: 363 gctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||| || ||||| ||||||||||| || ||||||||||| Sbjct: 390 gctgacgacagcgggtccgaaggagactgccgggttcatgga 349
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 12824 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 12779
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 168202 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 168157
>gb|AF225898.1|AF225898 Homo sapiens BAC clone 13d21, complete sequence Length = 198084 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 cacacacagtttaccctgaatt 106 |||||||||||||||||||||| Sbjct: 67269 cacacacagtttaccctgaatt 67248
>dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full insert sequence Length = 1194 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 714 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 669
>dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full insert sequence Length = 1214 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 716 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 671
>dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full insert sequence Length = 1074 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 594 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 549
>dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full insert sequence Length = 1197 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 717 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 672
>dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full insert sequence Length = 1195 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 715 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 670
>dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full insert sequence Length = 1202 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 717 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 672
>dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full insert sequence Length = 1220 Score = 44.1 bits (22), Expect = 0.35 Identities = 40/46 (86%) Strand = Plus / Minus Query: 359 cgccgctgaccacggcggggccgaaggagacggcggggttcatgga 404 |||||||| | |||||||||||||||||| || ||||||||||| Sbjct: 715 cgccgctggcgacggcggggccgaaggagcgcgccgggttcatgga 670
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 gggcggcgatggcggcgccggc 320 |||||||||||||||||||||| Sbjct: 870643 gggcggcgatggcggcgccggc 870664
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cgggcgctggccgatgaagcagatg 288 |||||||| |||||||||||||||| Sbjct: 2468789 cgggcgctcgccgatgaagcagatg 2468813
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 cgggcgctggccgatgaagcagatg 288 |||||||| |||||||||||||||| Sbjct: 3717221 cgggcgctcgccgatgaagcagatg 3717197
>ref|XM_856403.1| PREDICTED: Canis familiaris similar to aquaporin 6, transcript variant 2 (LOC607978), mRNA Length = 1082 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 ggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||| ||| ||||||||||| Sbjct: 588 ggcggggccgaaggagcgggccgggttcatgga 556
>ref|XM_845359.1| PREDICTED: Canis familiaris similar to aquaporin 6, transcript variant 1 (LOC607978), mRNA Length = 1067 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 ggcggggccgaaggagacggcggggttcatgga 404 |||||||||||||||| ||| ||||||||||| Sbjct: 573 ggcggggccgaaggagcgggccgggttcatgga 541
>gb|AC124174.4| Mus musculus BAC clone RP23-181O22 from chromosome 3, complete sequence Length = 197553 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 acacccagtggttctcccaga 358 ||||||||||||||||||||| Sbjct: 157776 acacccagtggttctcccaga 157796
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 cgggcgctggccgatgaagcagatg 288 |||||||| |||||||||||||||| Sbjct: 3457527 cgggcgctcgccgatgaagcagatg 3457503
>gb|AF326504.1|AF326504 Zea mays tonoplast membrane integral protein ZmTIP3-1 mRNA, complete cds Length = 989 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggt 349 ||||| ||||||||||||||||||| Sbjct: 730 gggcccagccagtacacccagtggt 706
>ref|NM_001009467.1| Ovis aries 6-phosphogluconate dehydrogenase (decarboxylating) (6-PGDH), mRNA Length = 1918 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccggcaaag 324 |||||||||||||||| |||||||| Sbjct: 70 ggcggcgatggcggcggcggcaaag 46
>dbj|AB206104.1| Mimosa pudica tip1;1 mRNA for tonoplast intrinsic protein 1;1, complete cds Length = 1067 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 325 gggccgagccagtacacccagtggttctcccag 357 ||||||| |||||| ||||||||||| |||||| Sbjct: 738 gggccgacccagtagacccagtggttgtcccag 706 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 824 agtaatcggtggtggggagctgctcgtg 797
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttctcaatctctcatggcgat 195 ||||||||||||||||||||| Sbjct: 83981 ttctcaatctctcatggcgat 83961
>ref|XM_314890.2| Anopheles gambiae str. PEST ENSANGP00000012326 (ENSANGG00000009837), partial mRNA Length = 1641 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 328 ccgagccagtacacccagtggttctccca 356 |||| |||||||||||||||||| ||||| Sbjct: 752 ccgacccagtacacccagtggttgtccca 724
>gb|AY104541.1| Zea mays PCO074685 mRNA sequence Length = 633 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 325 gggccgagccagtacacccagtggt 349 ||||| ||||||||||||||||||| Sbjct: 368 gggcccagccagtacacccagtggt 392
>dbj|AB099706.1| Streptomyces violaceoruber plasmid SCP1 from strain 1147 genes for putative lactone-dependent transcriptional regulator MmyR and hypothetical proteins, complete cds Length = 2688 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 ccagggcggcgatggcggcgc 316 ||||||||||||||||||||| Sbjct: 2206 ccagggcggcgatggcggcgc 2226
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccggc 320 ||||||||||||||||||||| Sbjct: 3194246 ggcggcgatggcggcgccggc 3194266
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cgggcgctggccgatgaagcagatg 288 |||||||| |||||||||||||||| Sbjct: 1405319 cgggcgctcgccgatgaagcagatg 1405343
>gb|AY741212.1| Cryptovalsa sp. BCC 7197 family 10 xylanase mRNA, complete cds Length = 1202 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 ccagggcggcgatggcggcgccggc 320 ||||||||||||||| ||||||||| Sbjct: 814 ccagggcggcgatggtggcgccggc 790
>emb|X60195.1|OA6PDGH Ovine 6-pgdh mRNA for 6-phosphogluconate dehydrogenase Length = 1953 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccggcaaag 324 |||||||||||||||| |||||||| Sbjct: 70 ggcggcgatggcggcggcggcaaag 46
>gb|DQ202710.1| Olea europaea tonoplast intrinsic protein (tip) mRNA, complete cds Length = 1064 Score = 42.1 bits (21), Expect = 1.4 Identities = 69/85 (81%) Strand = Plus / Minus Query: 320 caaaggggccgagccagtacacccagtggttctcccagacgccgctgaccacggcggggc 379 |||| |||||||||||||| ||||||||| | ||||| | |||||| || || |||| Sbjct: 768 caaatgggccgagccagtagacccagtggctgtcccatgtccagctgacgacagcagggc 709 Query: 380 cgaaggagacggcggggttcatgga 404 | || || ||||| ||||||||||| Sbjct: 708 caaaagacacggctgggttcatgga 684
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccggcaaaggggccga 331 |||||||||||||||| ||| | ||||||||| Sbjct: 3651616 ggcggcgatggcggcggcggtataggggccga 3651585
>ref|NM_188624.1| Oryza sativa (japonica cultivar-group), Ozsa8227 predicted mRNA Length = 756 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 376 gggccgaaggagacggcggggttcatggacgcgccg 411 |||||||||||| ||| ||||||||||| |||||| Sbjct: 608 gggccgaaggagcgggccgggttcatggaggcgccg 573
>ref|XM_480022.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1572 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 1356 ggcggcgatggcggcgccgg 1337
>gb|AC168309.2| Mus musculus chromosome 1, clone wi1-2866I16, complete sequence Length = 40737 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 150 gatgacacgatgacacttgcttgatttc 177 ||||||| ||||||| |||||||||||| Sbjct: 2691 gatgacatgatgacaattgcttgatttc 2664
>gb|AC145376.3| Pan troglodytes BAC clone RP43-59A12 from 7, complete sequence Length = 221727 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gatgacacgatgacacttgc 169 |||||||||||||||||||| Sbjct: 108005 gatgacacgatgacacttgc 107986
>gb|AC102374.7| Mus musculus chromosome 1, clone RP23-278G2, complete sequence Length = 170448 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 gatgacacgatgacacttgcttgatttc 177 ||||||| ||||||| |||||||||||| Sbjct: 25899 gatgacatgatgacaattgcttgatttc 25926
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 2915284 ggcggcgatggcggcgccgg 2915265 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 1997572 ggcggcgatggcggcgccgg 1997591
>ref|XM_543677.2| PREDICTED: Canis familiaris similar to Aquaporin 5 (LOC486551), mRNA Length = 1556 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 365 tgaccacggcggggccgaaggagacggcggggttcatgga 404 ||||||| ||||||||||| ||| ||| ||||||||||| Sbjct: 802 tgaccactgcggggccgaaagagcgggccgggttcatgga 763
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 gggcggcgatggcggcgccg 318 |||||||||||||||||||| Sbjct: 734071 gggcggcgatggcggcgccg 734052
>gb|AC090498.4| Homo sapiens chromosome 7 clone RP11-84E17, complete sequence Length = 188036 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gatgacacgatgacacttgc 169 |||||||||||||||||||| Sbjct: 67930 gatgacacgatgacacttgc 67911
>gb|AC083905.20| Homo sapiens 3 BAC RP11-124N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109471 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 actgatgacacgatgacact 166 |||||||||||||||||||| Sbjct: 67496 actgatgacacgatgacact 67515
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gcggcgatggcggcgccggc 320 |||||||||||||||||||| Sbjct: 189463 gcggcgatggcggcgccggc 189482
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 cagggcggcgatggcggcgccggc 320 |||||||||| ||||||||||||| Sbjct: 1183702 cagggcggcgttggcggcgccggc 1183725
>gb|AC087258.14| Homo sapiens 12p BAC RP11-686N4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127018 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tgaatttctcaaagaccaga 120 |||||||||||||||||||| Sbjct: 112828 tgaatttctcaaagaccaga 112809
>gb|DQ207951.1| Comamonas sp. CNB-1 putative regulatory protein (cnbR), putative ferredoxin (orf1), 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit (cnbCa), 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit (cnbCb), 2-amino-5-chloromuconic semialdehyde dehydrogenase (cnbD), putative 2-keto-4-pentenoate hydratase (cnbE), putative 4-oxalocrotonate decarboxylase (cnbF), 4-oxalocrotonate tautomerase (cnbG), 2-amino-5-chloromuconate deaminase (cnbH), and putative 2-keto-4-pentenoate hydratase (cnbI) genes, complete cds Length = 10644 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ccagggcggcgatggcggcg 315 |||||||||||||||||||| Sbjct: 7695 ccagggcggcgatggcggcg 7676
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 2262773 ggcggcgatggcggcgccgg 2262792
>dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0042P21 Length = 141230 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ggcggcgccggcaaaggggc 328 |||||||||||||||||||| Sbjct: 54579 ggcggcgccggcaaaggggc 54598
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gcggcgatggcggcgccggc 320 |||||||||||||||||||| Sbjct: 292608 gcggcgatggcggcgccggc 292589
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 376 gggccgaaggagacggcggggttcatggacgcgccg 411 |||||||||||| ||| ||||||||||| |||||| Sbjct: 98901 gggccgaaggagcgggccgggttcatggaggcgccg 98866
>gb|AF275315.1|AF275315 Lotus japonicus water-selective transport intrinsic membrane protein 1 mRNA, complete cds Length = 1162 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 370 acggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 ||||| || ||||| || ||||||||||||||||| || ||||| Sbjct: 679 acggctggtccgaatgacacggcggggttcatggatgctccgtc 636
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 110653 ggcggcgatggcggcgccgg 110672 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 67930 ggcggcgatggcggcgccgg 67911
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 10272 ggcggcgatggcggcgccgg 10291
>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1368_G08 Length = 107074 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcggcgatggcggcgccgg 319 |||||||||||||||||||| Sbjct: 60900 ggcggcgatggcggcgccgg 60919
>ref|XM_314891.2| Anopheles gambiae str. PEST ENSANGP00000012352 (ENSANGG00000009863), partial mRNA Length = 936 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 ccagtacacccagtggttctccca 356 |||||||||||||||||| ||||| Sbjct: 285 ccagtacacccagtggttgtccca 262
>gb|AC009999.2|T20M3 Sequence of BAC T20M3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 79554 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gtacaaacattaatcttgac 20 |||||||||||||||||||| Sbjct: 5058 gtacaaacattaatcttgac 5039
>dbj|AK069192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007E01, full insert sequence Length = 1112 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 376 gggccgaaggagacggcggggttcatggacgcgccg 411 |||||||||||| ||| ||||||||||| |||||| Sbjct: 611 gggccgaaggagcgggccgggttcatggaggcgccg 576
>dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full insert sequence Length = 870 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 236 agtactcggcggtggggagctgctcgtg 263 |||| |||| |||||||||||||||||| Sbjct: 674 agtagtcggtggtggggagctgctcgtg 647
>dbj|AP004479.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012b, complete sequence Length = 41820 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 370 acggcggggccgaaggagacggcggggttcatggacgcgccgtc 413 ||||| || ||||| || ||||||||||||||||| || ||||| Sbjct: 10117 acggctggtccgaatgacacggcggggttcatggatgctccgtc 10160 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,417,850 Number of Sequences: 3902068 Number of extensions: 3417850 Number of successful extensions: 82064 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 80453 Number of HSP's gapped (non-prelim): 1606 length of query: 413 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 391 effective length of database: 17,147,199,772 effective search space: 6704555110852 effective search space used: 6704555110852 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
