ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart07e08 |
|---|---|
| Clone Library Name | barley_pub |
>RS4_MAIZE (O22424) 40S ribosomal protein S4| Length = 265 Score = 157 bits (397), Expect = 2e-38 Identities = 79/104 (75%), Positives = 84/104 (80%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIKANDTIK+DLETNKIV FIKFD VIKNREKHKG+FETIHVED Sbjct: 153 LIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVED 212 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKRD 197 + GHQFATR+GNVFTIGKG KPWVSLPKGKGIKL+IIEEQRKRD Sbjct: 213 SLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256
>RS4_PRUAR (O81363) 40S ribosomal protein S4| Length = 261 Score = 153 bits (386), Expect = 3e-37 Identities = 77/103 (74%), Positives = 82/103 (79%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIKANDTIKLDLETNKI FIKFD VIKNREKHKG+FETIHV+D Sbjct: 149 LIKANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQD 208 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A GH+FATRLGNVFTIGKGTKPWVSLPKGKGIKLTI+EE +KR Sbjct: 209 ATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTILEEAKKR 251
>RS4_SOLTU (P46300) 40S ribosomal protein S4| Length = 264 Score = 153 bits (386), Expect = 3e-37 Identities = 75/103 (72%), Positives = 84/103 (81%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIKANDTIKLDLE+NKIV FIKFD VIKNREKHKG+FET+H++D Sbjct: 153 LIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQD 212 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 +QGH+FATRLGNVFT+GKGTKPWVSLPKGKGIKLTIIE+ RKR Sbjct: 213 SQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARKR 255
>RS4_GOSHI (P46299) 40S ribosomal protein S4| Length = 262 Score = 150 bits (379), Expect = 2e-36 Identities = 77/103 (74%), Positives = 82/103 (79%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIKANDTIKLDLE+NKIV FIKFD VIKNREKHKG+FETIHV+D Sbjct: 153 LIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQD 212 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A GH+FATRLGNVFTIGKGTKPWVSLPK KGIKL+IIEE RKR Sbjct: 213 AAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIKLSIIEEARKR 255
>RS4_ARATH (P49204) 40S ribosomal protein S4| Length = 262 Score = 149 bits (377), Expect = 3e-36 Identities = 75/103 (72%), Positives = 81/103 (78%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTIKLDLE NKIV FIKFD VIKNREKHKG+FETIH++D Sbjct: 153 LIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQD 212 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 + GH+FATRLGNV+TIGKGTKPWVSLPKGKGIKLTIIEE RKR Sbjct: 213 STGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKR 255
>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)| Length = 268 Score = 96.7 bits (239), Expect(2) = 7e-31 Identities = 45/49 (91%), Positives = 47/49 (95%) Frame = -2 Query: 361 KGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIE 215 KG+FETIHVEDA GHQFATRLGNVFTIGKG KPWVSLPKGKGIKL+IIE Sbjct: 205 KGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIE 253 Score = 56.6 bits (135), Expect(2) = 7e-31 Identities = 26/49 (53%), Positives = 33/49 (67%) Frame = -1 Query: 500 GQRHHQARPGDQQDCXLHQVXXXXXRHGDWWAQHWACWCDQEQGEA*GN 354 G+RH+Q R GDQQ+ LHQ HGD W ++ A WCDQ+QGEA G+ Sbjct: 160 GKRHNQDRSGDQQELRLHQGLMLAMCHGD-WRRNTAVWCDQQQGEAKGS 207
>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform| Length = 262 Score = 124 bits (311), Expect = 1e-28 Identities = 60/103 (58%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NREKH G+F+ +HV+D Sbjct: 152 LIKMNDTIQIDLETGKITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4| Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_XENLA (P49401) 40S ribosomal protein S4| Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_CRIGR (P47961) 40S ribosomal protein S4| Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_CHICK (P47836) 40S ribosomal protein S4| Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform| Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform| Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform| Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform| Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant| mRNA protein) (SCR10) Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform| Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform| Length = 262 Score = 123 bits (309), Expect = 3e-28 Identities = 59/103 (57%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 122 bits (306), Expect = 6e-28 Identities = 58/103 (56%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDT++++LET KI FIKFD VI NREKH G+F+ +HV+D Sbjct: 152 LIKVNDTVQINLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform| Length = 262 Score = 120 bits (300), Expect = 3e-27 Identities = 57/103 (55%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DL+T KI FIKF+ VI NREKH G+F+ +HV+D Sbjct: 152 LIKVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 + G+ FATRL N+F IGKG KPWVSLP+GKG++LTI EE+ KR Sbjct: 212 SIGNSFATRLSNIFVIGKGNKPWVSLPRGKGVRLTIAEERDKR 254
>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4| Length = 262 Score = 119 bits (298), Expect = 5e-27 Identities = 56/103 (54%), Positives = 72/103 (69%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 +IKANDT+++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 MIKANDTVRIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 + G+ FATRL N+F IGKG K WVS+P+GKGI+LTI EE+ KR Sbjct: 212 STGNSFATRLSNIFVIGKGNKAWVSIPRGKGIRLTIAEERDKR 254
>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 118 bits (296), Expect = 8e-27 Identities = 55/103 (53%), Positives = 71/103 (68%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDT+++DL T KI+ FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 LIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 117 bits (294), Expect = 1e-26 Identities = 54/103 (52%), Positives = 71/103 (68%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 +IK NDT+++DL T KI+ FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 VIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ EE+ KR Sbjct: 212 ANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKR 254
>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 117 bits (292), Expect = 2e-26 Identities = 53/103 (51%), Positives = 71/103 (68%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 +IK NDT+++DL T KI+ FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 VIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATR+ N+F IG G KPW+SLP+GKGI+LT+ EE+ KR Sbjct: 212 ANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDKR 254
>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 115 bits (288), Expect = 7e-26 Identities = 53/103 (51%), Positives = 70/103 (67%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 +IK NDT+++DL T KI+ FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 VIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ E+ KR Sbjct: 212 ANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKR 254
>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 115 bits (288), Expect = 7e-26 Identities = 53/103 (51%), Positives = 70/103 (67%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 +IK NDT+++DL T KI+ FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 VIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ E+ KR Sbjct: 212 ANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKR 254
>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 115 bits (288), Expect = 7e-26 Identities = 53/103 (51%), Positives = 70/103 (67%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 +IK NDT+++DL + KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 152 VIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ASGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 115 bits (287), Expect = 9e-26 Identities = 54/103 (52%), Positives = 69/103 (66%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDT+++DL T KI FIKFD VI NRE+H G+ + +HV+D Sbjct: 152 LIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 114 bits (285), Expect = 2e-25 Identities = 53/103 (51%), Positives = 69/103 (66%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDT+++DL T KI FIKFD V+ NRE+H G+ + +HV+D Sbjct: 152 LIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKD 211 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 212 ANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B| Length = 262 Score = 113 bits (282), Expect = 3e-25 Identities = 57/103 (55%), Positives = 68/103 (66%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTIKL+LETNKI FIKFD I +RE H G+FE IHV+D Sbjct: 153 LIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKD 212 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A +FATRL NVF IG+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 213 ALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDRR 255
>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C| Length = 262 Score = 112 bits (280), Expect = 6e-25 Identities = 57/103 (55%), Positives = 68/103 (66%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTIKL+LETNKI FIKFD I +RE H G+FE IHV+D Sbjct: 153 LIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKD 212 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A +FATRL NVF IG+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 213 ALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRR 255
>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A| Length = 262 Score = 112 bits (280), Expect = 6e-25 Identities = 57/103 (55%), Positives = 68/103 (66%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTIKL+LETNKI FIKFD I +RE H G+FE IHV+D Sbjct: 153 LIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKD 212 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A +FATRL NVF IG+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 213 ALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRR 255
>RS4_DROME (P41042) 40S ribosomal protein S4| Length = 261 Score = 112 bits (279), Expect = 8e-25 Identities = 51/103 (49%), Positives = 71/103 (68%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LI AND++++D+ + KI +IKFD + NRE+H G+F+ +H++D Sbjct: 153 LIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKD 212 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 +QGH FATRL NVF IGKG KP++SLPKGKG+KL+I EE+ KR Sbjct: 213 SQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKR 255
>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)| Length = 260 Score = 103 bits (257), Expect = 3e-22 Identities = 50/103 (48%), Positives = 66/103 (64%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDT+K+DL T KI F+KF+ I +RE+H+G F+ +H++D Sbjct: 153 LIKVNDTVKIDLATGKITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKD 212 Query: 328 AQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 A +QF TRL NVF IG+G K +SLPKGKGIKL+I EE+ R Sbjct: 213 ALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEERDAR 255
>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)| Length = 262 Score = 101 bits (251), Expect = 1e-21 Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 1/104 (0%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LI+ANDT+K+DL T KI FIKFD VI +REK +G F+ +H++D Sbjct: 153 LIRANDTVKIDLATGKIXSFIKFDTGRLVMVTGGRNLGRVGVIVHREKLEGGFDLVHIKD 212 Query: 328 AQGHQFATRLGNVFTIG-KGTKPWVSLPKGKGIKLTIIEEQRKR 200 A + F TRL NVF IG + KPWVSLPKGKGIKL+I EE+ +R Sbjct: 213 ALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRR 256
>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)| Length = 260 Score = 99.0 bits (245), Expect = 7e-21 Identities = 47/102 (46%), Positives = 65/102 (63%) Frame = -2 Query: 505 IKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 326 IK NDT+K+DL + KI FIKFD I ++E+H G F+ +H++D+ Sbjct: 153 IKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDS 212 Query: 325 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 + F TRL NVF IG+ KP++SLPKGKGIKL+I EE+ +R Sbjct: 213 LDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRR 254
>RS4_DICDI (P51405) 40S ribosomal protein S4| Length = 266 Score = 92.4 bits (228), Expect = 6e-19 Identities = 43/99 (43%), Positives = 62/99 (62%) Frame = -2 Query: 505 IKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 326 I +DTIK+D+E+ KI FI F+ + +REKH G+F+ +HV D Sbjct: 153 ISIHDTIKIDIESGKITAFIPFEVNNLCMIVGGHNLGRVGAVTHREKHPGSFDIVHVTDT 212 Query: 325 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQ 209 GHQFATRL NVF IGK ++ +VSLP GKG++ + ++E+ Sbjct: 213 AGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDER 251
>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4| Length = 259 Score = 87.4 bits (215), Expect = 2e-17 Identities = 44/102 (43%), Positives = 60/102 (58%) Frame = -2 Query: 505 IKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 326 +K NDTI ++ T KI +KF+ +I +RE+ G + IH++D+ Sbjct: 153 VKVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDS 212 Query: 325 QGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 200 GH FATR+ NVF IGKG K VSLP G GI+L+I EE+ KR Sbjct: 213 AGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDKR 254
>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 60.5 bits (145), Expect = 3e-09 Identities = 30/61 (49%), Positives = 37/61 (60%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 134 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 193 Query: 328 A 326 A Sbjct: 194 A 194
>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 60.5 bits (145), Expect = 3e-09 Identities = 30/61 (49%), Positives = 37/61 (60%) Frame = -2 Query: 508 LIKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVED 329 LIK NDTI++DLET KI FIKFD VI NRE+H G+F+ +HV+D Sbjct: 134 LIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 193 Query: 328 A 326 A Sbjct: 194 A 194
>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin| resistance protein) Length = 154 Score = 33.5 bits (75), Expect = 0.34 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = -2 Query: 382 IKNREKHKGTFETIHVEDAQGHQFATRLGNVF---TIGKGTKPWVSLPKG 242 +K R++H+G ++I+ D GH+F G+VF + KP +S +G Sbjct: 95 LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144
>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)| Length = 1117 Score = 32.3 bits (72), Expect = 0.77 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Frame = +2 Query: 338 VDGLKGSLMLLPVLD----HTNTPSVAPTSHHDDVADVKLDEVHNLVGLQVELDGV 493 ++ LK + L+P D H N +VA T H + D+ D++ N V ++ E D + Sbjct: 72 IENLKDNQDLIPNNDVNGIHINNSAVADTKHKPKIGDIAADDISNEVSIKNEGDTI 127
>Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977| Length = 199 Score = 31.2 bits (69), Expect = 1.7 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%) Frame = +2 Query: 281 NGEH------VAQTGGKLVTLGILNVDGLKGSLMLL 370 NG H V + GGKL +G+L D LKGSL +L Sbjct: 36 NGSHNPGATNVLRNGGKLAAIGVLLFDTLKGSLPVL 71
>LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) Length = 565 Score = 30.8 bits (68), Expect = 2.2 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = -2 Query: 367 KHKGTFETIHVEDAQGHQFATRLGNV 290 KHKGT+ETI E+ GH+ TR+G V Sbjct: 345 KHKGTYETISPEEI-GHKRTTRIGIV 369
>RS4_CHLS6 (Q40941) 40S ribosomal protein S4| Length = 242 Score = 30.8 bits (68), Expect = 2.2 Identities = 20/85 (23%), Positives = 35/85 (41%) Frame = -2 Query: 505 IKANDTIKLDLETNKIVXFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 326 IK D++ + ++IV +KF+ VIK K K + IH+E Sbjct: 154 IKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEIRKTKSLRKMIHLEKI 213 Query: 325 QGHQFATRLGNVFTIGKGTKPWVSL 251 G + + ++ IG+ +SL Sbjct: 214 DGKKLTKKCSDLLVIGESKTSILSL 238
>YCGV_ECO57 (Q8X583) Hypothetical protein ycgV| Length = 547 Score = 30.0 bits (66), Expect = 3.8 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 358 GTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 260 GTF T++VE+ G+ +V G G KPW Sbjct: 514 GTFTTLNVENLSGNSTFIMRADVVGEGNGVKPW 546
>MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 310 Score = 29.6 bits (65), Expect = 5.0 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +2 Query: 311 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDEVHNLVGLQV 478 KL LGI VDG+ L + P LD TP + HHD D+++D+ +L V Sbjct: 85 KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQDASLTAYDV 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,014,586 Number of Sequences: 219361 Number of extensions: 1503975 Number of successful extensions: 4146 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 3955 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4110 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
