ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart07d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X56782.1|TA1B38 T.aestivum 1b-c38 gene for HBP-1b (leucine z... 418 e-114
2dbj|AK073601.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 8e-61
3dbj|AB037151.1| Oryza sativa (japonica cultivar-group) OsRPN10 m... 242 8e-61
4dbj|AB010740.1| Oryza sativa (japonica cultivar-group) mRNA for ... 242 8e-61
5gb|BT018579.1| Zea mays clone EL01N0445E02.d mRNA sequence 147 3e-32
6gb|AY103564.1| Zea mays PCO151364 mRNA sequence 139 8e-30
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 117 3e-23
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
9gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome... 117 3e-23
10gb|BT017153.1| Zea mays clone EL01N0367E07.c mRNA sequence 115 1e-22
11gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete s... 56 1e-04
12gb|AC121233.16| Medicago truncatula clone mth2-14g13, complete s... 56 1e-04
13ref|NG_000009.2| Homo sapiens small histone family cluster (HFS@... 44 0.37
14emb|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 o... 44 0.37
15gb|AF326737.2| Mus musculus sclerostin (Sost) gene, complete cds... 44 0.37
16gb|AC068807.21| Mus musculus 11 BAC RP23-346P7 (Roswell Park Can... 44 0.37
17emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chr... 44 0.37
18gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome ... 42 1.5
19gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosom... 42 1.5
20emb|AL357514.19| Human DNA sequence from clone RP1-105O18 on chr... 42 1.5
21gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence 42 1.5
22emb|AL021068.2|HS206D15 Human DNA sequence from clone RP1-206D15... 42 1.5
23emb|AL390218.1|NCB7N4 Neurospora crassa DNA linkage group II BAC... 42 1.5
24emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chr... 42 1.5
25emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chrom... 42 1.5
26gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, com... 40 5.7
27gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, co... 40 5.7
28gb|AE013022.1| Thermoanaerobacter tengcongensis MB4, section 49 ... 40 5.7
29gb|AE013013.1| Thermoanaerobacter tengcongensis MB4, section 40 ... 40 5.7
30gb|AC113510.9| Mus musculus chromosome 5, clone RP23-378O9, comp... 40 5.7
31gb|AE013205.1| Thermoanaerobacter tengcongensis MB4, section 232... 40 5.7
32gb|AE013097.1| Thermoanaerobacter tengcongensis MB4, section 124... 40 5.7
33gb|AE013053.1| Thermoanaerobacter tengcongensis MB4, section 80 ... 40 5.7
34gb|AY368907.1| Lycopersicon esculentum molecular chaperone Hsp90... 40 5.7
35gb|AY368906.1| Lycopersicon esculentum molecular chaperone Hsp90... 40 5.7
36gb|AY368904.1| Nicotiana benthamiana molecular chaperone Hsp90-1... 40 5.7
37gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome... 40 5.7
38gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosom... 40 5.7
39gb|AY310789.1| Nicotiana benthamiana clone 10-186 unknown mRNA 40 5.7
40gb|AY310781.1| Nicotiana benthamiana clone 9-037 unknown mRNA 40 5.7
41gb|AC161582.4| Monodelphis domestica, clone XX-27C10, complete s... 40 5.7
42emb|AL591845.27| Human DNA sequence from clone RP11-268J15 on ch... 40 5.7
43gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 5.7
44emb|AL031675.4|HS751L1 Human DNA sequence from clone RP4-751L1 o... 40 5.7
45emb|AL009178.4|HS431P23 Human DNA sequence from clone RP3-431P23... 40 5.7
46gb|BC008189.1| Mus musculus, clone IMAGE:3584589, mRNA, partial cds 40 5.7
47dbj|AK148842.1| Mus musculus 2 days neonate sympathetic ganglion... 40 5.7
48ref|XM_689365.1| PREDICTED: Danio rerio similar to [Carassius au... 40 5.7
49gb|AC104195.10| Mus musculus chromosome 5, clone RP24-95O4, comp... 40 5.7
50dbj|AK041514.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 5.7
51gb|AC103644.15| Mus musculus chromosome 7, clone RP24-361F3, com... 40 5.7
52emb|BX005158.8| Zebrafish DNA sequence from clone DKEY-222N6 in ... 40 5.7
53gb|AC006924.3|AC006924 Homo sapiens, clone hRPK.32_A_1, complete... 40 5.7
54gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 5.7
55emb|CT009764.9| Mouse DNA sequence from clone RP23-173E21 on chr... 40 5.7
56ref|NM_029749.1| Mus musculus ubiquitin specific peptidase 42 (U... 40 5.7
57gb|M96549.1|TOMHSC80P Tomato heat shock cognate protein 80 gene,... 40 5.7
58gb|AC160060.20| Mus musculus 10 BAC RP23-360L4 (Roswell Park Can... 40 5.7
59gb|DQ252488.1| Solanum tuberosum clone 054G03 Hsp90-2-like mRNA,... 40 5.7
60dbj|AB016897.1| Homo sapiens genomic DNA, chromosome 6q27, compl... 40 5.7 
>emb|X56782.1|TA1B38 T.aestivum 1b-c38 gene for HBP-1b (leucine zipper type transcription
            factor)
          Length = 2204

 Score =  418 bits (211), Expect = e-114
 Identities = 264/282 (93%), Gaps = 6/282 (2%)
 Strand = Plus / Minus

                                                                        
Query: 153  agttcttcccatcttcaggcttgtctgtcttggccgcctcatctttcttctcctc----- 207
            ||||||||||||||||||   |||||| |||| || ||| |||||||||||||||     
Sbjct: 1949 agttcttcccatcttcagaaatgtctggcttgtcctccttatctttcttctcctcctgct 1890

                                                                        
Query: 208  -tccttggccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacac 266
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1889 ctccttggccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacac 1830

                                                                        
Query: 267  caggaagcgaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatat 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1829 caggaagcgaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatat 1770

                                                                        
Query: 327  caaattgaccagacgcctctgcgtcctgaacagacatttgaagagccgatgccaaatcct 386
            || ||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1769 cagattgaccagccgcctcagcgtcctggacagacatttgaagagccaatgccaaatcct 1710

                                                      
Query: 387  ggtcatctgcagcagcttctgccatagcagcatcagccacgg 428
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1709 ggtcatctgcagcagcttctgccatagcagcatcagccacgg 1668



 Score =  129 bits (65), Expect = 8e-27
 Identities = 110/124 (88%), Gaps = 7/124 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    gagagcagacataatacaaattctcttggcatttgagttatcgtcaacgcagttaccaga 60
            ||||||||||||||||||| |||||| ||||     |||||| ||||||||||||| |||
Sbjct: 2111 gagagcagacataatacaagttctctcggca-----gttatcatcaacgcagttacaaga 2057

                                                                        
Query: 61   ggatcaagtaaattcatag--cccaagtgtaaaagcagctaatgcaggcaatcttcttcc 118
            |||| ||||||||||||||  ||| |||||||||||||||||||||||||||||||||| 
Sbjct: 2056 ggattaagtaaattcatagagcccgagtgtaaaagcagctaatgcaggcaatcttcttca 1997

                
Query: 119  cttc 122
            ||||
Sbjct: 1996 cttc 1993
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>dbj|AK073601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046D23, full
            insert sequence
          Length = 1899

 Score =  242 bits (122), Expect = 8e-61
 Identities = 188/210 (89%)
 Strand = Plus / Minus

                                                                        
Query: 215  ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccaggaagc 274
            |||||||| |||||||| | |||||||||||| ||||||||||||||||||||||| || 
Sbjct: 1219 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagggaga 1160

                                                                        
Query: 275  gaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcaaattga 334
            || |||||||||||||| ||||||||||||||||||||||| |||||||||||| | |||
Sbjct: 1159 gagttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactga 1100

                                                                        
Query: 335  ccagacgcctctgcgtcctgaacagacatttgaagagccgatgccaaatcctggtcatct 394
            | |||| |  |||||||||| |||||||||||||||||   |||||| ||||||||||||
Sbjct: 1099 ctagacccgcctgcgtcctggacagacatttgaagagctagtgccaagtcctggtcatct 1040

                                          
Query: 395  gcagcagcttctgccatagcagcatcagcc 424
             ||||||| |||||||||||||||||||||
Sbjct: 1039 acagcagcctctgccatagcagcatcagcc 1010
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>dbj|AB037151.1| Oryza sativa (japonica cultivar-group) OsRPN10 mRNA for 26S
            proteasome regulatory particle non-ATPase subunit10,
            complete cds
          Length = 1536

 Score =  242 bits (122), Expect = 8e-61
 Identities = 188/210 (89%)
 Strand = Plus / Minus

                                                                        
Query: 215  ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccaggaagc 274
            |||||||| |||||||| | |||||||||||| ||||||||||||||||||||||| || 
Sbjct: 1218 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagggaga 1159

                                                                        
Query: 275  gaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcaaattga 334
            || |||||||||||||| ||||||||||||||||||||||| |||||||||||| | |||
Sbjct: 1158 gagttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactga 1099

                                                                        
Query: 335  ccagacgcctctgcgtcctgaacagacatttgaagagccgatgccaaatcctggtcatct 394
            | |||| |  |||||||||| |||||||||||||||||   |||||| ||||||||||||
Sbjct: 1098 ctagacccgcctgcgtcctggacagacatttgaagagctagtgccaagtcctggtcatct 1039

                                          
Query: 395  gcagcagcttctgccatagcagcatcagcc 424
             ||||||| |||||||||||||||||||||
Sbjct: 1038 acagcagcctctgccatagcagcatcagcc 1009
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>dbj|AB010740.1| Oryza sativa (japonica cultivar-group) mRNA for OsS5a, complete cds
          Length = 1508

 Score =  242 bits (122), Expect = 8e-61
 Identities = 188/210 (89%)
 Strand = Plus / Minus

                                                                        
Query: 215  ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccaggaagc 274
            |||||||| |||||||| | |||||||||||| ||||||||||||||||||||||| || 
Sbjct: 1218 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagggaga 1159

                                                                        
Query: 275  gaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcaaattga 334
            || |||||||||||||| ||||||||||||||||||||||| |||||||||||| | |||
Sbjct: 1158 gagttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactga 1099

                                                                        
Query: 335  ccagacgcctctgcgtcctgaacagacatttgaagagccgatgccaaatcctggtcatct 394
            | |||| |  |||||||||| |||||||||||||||||   |||||| ||||||||||||
Sbjct: 1098 ctagacccgcctgcgtcctggacagacatttgaagagctagtgccaagtcctggtcatct 1039

                                          
Query: 395  gcagcagcttctgccatagcagcatcagcc 424
             ||||||| |||||||||||||||||||||
Sbjct: 1038 acagcagcctctgccatagcagcatcagcc 1009
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>gb|BT018579.1| Zea mays clone EL01N0445E02.d mRNA sequence
          Length = 1650

 Score =  147 bits (74), Expect = 3e-32
 Identities = 176/210 (83%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctctccttggccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaac 264
            |||||| ||||  ||||| |||||||| | |||||| |||||||| |||||||| |||||
Sbjct: 1257 ctctccctggctgtgcaatgatgccagcaaatctttaacagatggatcattgggatcaac 1198

                                                                        
Query: 265  accaggaagcgaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcat 324
            ||||||||||||||||||||| |||| |||||||| ||||||||||||||| || |||||
Sbjct: 1197 accaggaagcgaattaaggatagatgacacaaatgttctgtcttcaaacaccttactcat 1138

                                                                        
Query: 325  atcaaattgaccagacgcctctgcgtcctgaacagacatttgaagagccgatgccaaatc 384
            ||||   | ||  |||   | ||| ||||| |||||||||||||||||| | || || ||
Sbjct: 1137 atcagtgtcactggacatgtttgcatcctggacagacatttgaagagccaacgctaagtc 1078

                                          
Query: 385  ctggtcatctgcagcagcttctgccatagc 414
              ||||| ||||| ||||||||||||||||
Sbjct: 1077 agggtcaactgcaccagcttctgccatagc 1048
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>gb|AY103564.1| Zea mays PCO151364 mRNA sequence
          Length = 1318

 Score =  139 bits (70), Expect = 8e-30
 Identities = 175/210 (83%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctctccttggccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaac 264
            |||||| ||||  ||||| |||||||| | |||||| |||||||| |||||||| |||||
Sbjct: 1263 ctctccctggctgtgcaatgatgccagcaaatctttaacagatggatcattgggatcaac 1204

                                                                        
Query: 265  accaggaagcgaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctcat 324
            ||||||||||||||||||||| |||| |||||| | ||||||||||||||| || |||||
Sbjct: 1203 accaggaagcgaattaaggatagatgacacaaacgttctgtcttcaaacaccttactcat 1144

                                                                        
Query: 325  atcaaattgaccagacgcctctgcgtcctgaacagacatttgaagagccgatgccaaatc 384
            ||||   | ||  |||   | ||| ||||| |||||||||||||||||| | || || ||
Sbjct: 1143 atcagtgtcactggacatgtttgcatcctggacagacatttgaagagccaacgctaagtc 1084

                                          
Query: 385  ctggtcatctgcagcagcttctgccatagc 414
              ||||| ||||| ||||||||||||||||
Sbjct: 1083 agggtcaactgcaccagcttctgccatagc 1054
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  117 bits (59), Expect = 3e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                           
Query: 278     ttaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcaaattgacca 337
               |||||||||||||| ||||||||||||||||||||||| |||||||||||| | |||| |
Sbjct: 7550462 ttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactgacta 7550521

                                                  
Query: 338     gacgcctctgcgtcctgaacagacatttgaagagc 372
               ||| |  |||||||||| |||||||||||||||||
Sbjct: 7550522 gacccgcctgcgtcctggacagacatttgaagagc 7550556



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                       
Query: 215     ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccagg 270
               |||||||| |||||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 7550306 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagg 7550361



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                
Query: 376     tgccaaatcctggtcatctgcagcagcttctgccatagcagcatcagcc 424
               |||||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 7550797 tgccaagtcctggtcatctacagcagcctctgccatagcagcatcagcc 7550845
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  117 bits (59), Expect = 3e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                           
Query: 278     ttaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcaaattgacca 337
               |||||||||||||| ||||||||||||||||||||||| |||||||||||| | |||| |
Sbjct: 7548297 ttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactgacta 7548356

                                                  
Query: 338     gacgcctctgcgtcctgaacagacatttgaagagc 372
               ||| |  |||||||||| |||||||||||||||||
Sbjct: 7548357 gacccgcctgcgtcctggacagacatttgaagagc 7548391



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                       
Query: 215     ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccagg 270
               |||||||| |||||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 7548141 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagg 7548196



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                
Query: 376     tgccaaatcctggtcatctgcagcagcttctgccatagcagcatcagcc 424
               |||||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 7548632 tgccaagtcctggtcatctacagcagcctctgccatagcagcatcagcc 7548680
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>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0042A11, complete sequence
          Length = 113049

 Score =  117 bits (59), Expect = 3e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                         
Query: 278   ttaaggatggatgtcacaaatgatctgtcttcaaacactttgctcatatcaaattgacca 337
             |||||||||||||| ||||||||||||||||||||||| |||||||||||| | |||| |
Sbjct: 79358 ttaaggatggatgtaacaaatgatctgtcttcaaacaccttgctcatatcagactgacta 79417

                                                
Query: 338   gacgcctctgcgtcctgaacagacatttgaagagc 372
             ||| |  |||||||||| |||||||||||||||||
Sbjct: 79418 gacccgcctgcgtcctggacagacatttgaagagc 79452



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                     
Query: 215   ccatgcaaagatgccagtagatctttcacagatgggtcattggggtcaacaccagg 270
             |||||||| |||||||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 79202 ccatgcaatgatgccagcaaatctttcacagaggggtcattggggtcaacaccagg 79257



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                              
Query: 376   tgccaaatcctggtcatctgcagcagcttctgccatagcagcatcagcc 424
             |||||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 79693 tgccaagtcctggtcatctacagcagcctctgccatagcagcatcagcc 79741
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>gb|BT017153.1| Zea mays clone EL01N0367E07.c mRNA sequence
          Length = 1189

 Score =  115 bits (58), Expect = 1e-22
 Identities = 109/126 (86%)
 Strand = Plus / Minus

                                                                       
Query: 203 tcctctccttggccatgcaaagatgccagtagatctttcacagatgggtcattggggtca 262
           |||||||| ||||  ||||| |||||||  | |||||| | |||||| |||||||| |||
Sbjct: 990 tcctctccctggctgtgcaatgatgccaacaaatctttaatagatggatcattgggatca 931

                                                                       
Query: 263 acaccaggaagcgaattaaggatggatgtcacaaatgatctgtcttcaaacactttgctc 322
           ||||||||||||||||||||||| |||| |||||| | ||||||||||||||| || |||
Sbjct: 930 acaccaggaagcgaattaaggatagatgacacaaacgttctgtcttcaaacaccttactc 871

                 
Query: 323 atatca 328
           ||||||
Sbjct: 870 atatca 865
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>gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete sequence
          Length = 113210

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 235   atctttcacagatgggtcattggggtcaacaccaggaagc 274
             |||||| |||||||||||||| |||||||| |||||||||
Sbjct: 89777 atctttgacagatgggtcatttgggtcaaccccaggaagc 89816
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>gb|AC121233.16| Medicago truncatula clone mth2-14g13, complete sequence
          Length = 129617

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 235   atctttcacagatgggtcattggggtcaacaccaggaagc 274
             |||||| |||||||||||||| |||||||| |||||||||
Sbjct: 22550 atctttgacagatgggtcatttgggtcaaccccaggaagc 22589
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>ref|NG_000009.2| Homo sapiens small histone family cluster (HFS@) on chromosome 6
          Length = 91567

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 389   tcatctgcagcagcttctgccatagc 414
             ||||||||| ||||||||||||||||
Sbjct: 42594 tcatctgcatcagcttctgccatagc 42569
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>emb|Z98744.2|HS193B12 Human DNA sequence from clone RP1-193B12 on chromosome 6p21.3-22.3
             Contains the H2AFD, H2BFD, H2AFI, H1F5, H3FF, H4FK, H3FJ,
             H2AFN, and H2BFN histone genes, the OR2B2 gene for
             olfactory receptor 2B2, histone H2B family member I
             pseudogene H2BFIP, a hypothetical protein pseudogene,
             ESTs, STSs, GSSs and CpG islands, complete sequence
          Length = 100374

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 389   tcatctgcagcagcttctgccatagc 414
             ||||||||| ||||||||||||||||
Sbjct: 15599 tcatctgcatcagcttctgccatagc 15624
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>gb|AF326737.2| Mus musculus sclerostin (Sost) gene, complete cds; and Meox1 gene,
             partial sequence
          Length = 81806

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 185   gccgcctcatctttcttctcctctcc 210
             |||||||| |||||||||||||||||
Sbjct: 42315 gccgcctcttctttcttctcctctcc 42290
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>gb|AC068807.21| Mus musculus 11 BAC RP23-346P7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 208135

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 185   gccgcctcatctttcttctcctctcc 210
             |||||||| |||||||||||||||||
Sbjct: 89379 gccgcctcttctttcttctcctctcc 89354
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>emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chromosome 11, complete
              sequence
          Length = 187006

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 185    gccgcctcatctttcttctcctctcc 210
              |||||||| |||||||||||||||||
Sbjct: 168419 gccgcctcttctttcttctcctctcc 168444
to top
>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence
          Length = 218698

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 386  tggtcatctgcagcagcttctgcca 410
            ||||||||||||| |||||||||||
Sbjct: 7975 tggtcatctgcagaagcttctgcca 7999
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>gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosome 8, complete sequence
          Length = 199356

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 386   tggtcatctgcagcagcttctgcca 410
             ||||||||||||| |||||||||||
Sbjct: 10903 tggtcatctgcagaagcttctgcca 10879
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>emb|AL357514.19| Human DNA sequence from clone RP1-105O18 on chromosome 6 Contains a
             novel gene and a CpG island, complete sequence
          Length = 140630

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 194   tctttcttctcctctccttgg 214
             |||||||||||||||||||||
Sbjct: 41486 tctttcttctcctctccttgg 41506
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>gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence
          Length = 163567

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 390   catctgcagcagcttctgcca 410
             |||||||||||||||||||||
Sbjct: 83809 catctgcagcagcttctgcca 83829
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>emb|AL021068.2|HS206D15 Human DNA sequence from clone RP1-206D15 on chromosome 1q24 Contains
             the 3' end of the BLZF1 gene for basic leucine zipper
             nuclear factor 1 (JEM-1), the gene for a novel protein
             (FLJ25846), a novel gene, the SLC19A2 gene for solute
             carrier family 19 (thiamine transporter) member 2, an ATP
             synthase 6 (MTATP6) pseudogene, and a CpG island, complete
             sequence
          Length = 101574

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 188   gcctcatctttcttctcctctcctt 212
             ||||||||||| |||||||||||||
Sbjct: 79932 gcctcatcttttttctcctctcctt 79956
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>emb|AL390218.1|NCB7N4 Neurospora crassa DNA linkage group II BAC clone B7N4
          Length = 41750

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 192   catctttcttctcctctcctt 212
             |||||||||||||||||||||
Sbjct: 35369 catctttcttctcctctcctt 35349
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>emb|AL731688.14| Mouse DNA sequence from clone RP23-291K6 on chromosome 11 Contains the
             3' end of the Slit3 gene for slit homolog 3 (Drosophila),
             complete sequence
          Length = 113164

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 301   tctgtcttcaaacactttgct 321
             |||||||||||||||||||||
Sbjct: 38005 tctgtcttcaaacactttgct 37985
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>emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chromosome 2, complete
             sequence
          Length = 182529

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   atcttcttcccttcttcatgg 129
             |||||||||||||||||||||
Sbjct: 94788 atcttcttcccttcttcatgg 94808
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>gb|AC136746.15| Mus musculus chromosome 5, clone RP23-151C5, complete sequence
          Length = 195530

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   gtcatctgcagcagcttctg 407
             ||||||||||||||||||||
Sbjct: 92999 gtcatctgcagcagcttctg 93018
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>gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, complete sequence
          Length = 219244

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 180    tcttggccgcctcatctttcttctcctctcct 211
              |||| |||||||| |||| |||||||||||||
Sbjct: 179940 tctttgccgcctcctcttccttctcctctcct 179909
to top
>gb|AE013022.1| Thermoanaerobacter tengcongensis MB4, section 49 of 244 of the
            complete genome
          Length = 11441

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  catctttcttctcctctcct 211
            ||||||||||||||||||||
Sbjct: 3878 catctttcttctcctctcct 3897
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>gb|AE013013.1| Thermoanaerobacter tengcongensis MB4, section 40 of 244 of the
            complete genome
          Length = 10590

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  catctttcttctcctctcct 211
            ||||||||||||||||||||
Sbjct: 1578 catctttcttctcctctcct 1597
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>gb|AC113510.9| Mus musculus chromosome 5, clone RP23-378O9, complete sequence
          Length = 171806

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aattctcttggcatttgagt 38
              ||||||||||||||||||||
Sbjct: 152430 aattctcttggcatttgagt 152449
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>gb|AE013205.1| Thermoanaerobacter tengcongensis MB4, section 232 of 244 of the
            complete genome
          Length = 14275

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  catctttcttctcctctcct 211
            ||||||||||||||||||||
Sbjct: 3960 catctttcttctcctctcct 3979
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>gb|AE013097.1| Thermoanaerobacter tengcongensis MB4, section 124 of 244 of the
            complete genome
          Length = 10196

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  catctttcttctcctctcct 211
            ||||||||||||||||||||
Sbjct: 7861 catctttcttctcctctcct 7880
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>gb|AE013053.1| Thermoanaerobacter tengcongensis MB4, section 80 of 244 of the
            complete genome
          Length = 10122

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 192  catctttcttctcctctcct 211
            ||||||||||||||||||||
Sbjct: 4690 catctttcttctcctctcct 4671
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>gb|AY368907.1| Lycopersicon esculentum molecular chaperone Hsp90-2 mRNA, complete
           cds
          Length = 2100

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 cctcatctttcttctcctct 208
           ||||||||||||||||||||
Sbjct: 691 cctcatctttcttctcctct 672
to top
>gb|AY368906.1| Lycopersicon esculentum molecular chaperone Hsp90-1 mRNA, complete
           cds
          Length = 2100

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 cctcatctttcttctcctct 208
           ||||||||||||||||||||
Sbjct: 691 cctcatctttcttctcctct 672
to top
>gb|AY368904.1| Nicotiana benthamiana molecular chaperone Hsp90-1 mRNA, complete
           cds
          Length = 2100

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 cctcatctttcttctcctct 208
           ||||||||||||||||||||
Sbjct: 691 cctcatctttcttctcctct 672
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>gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome 5, complete sequence
          Length = 144545

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 180   tcttggccgcctcatctttcttctcctctcct 211
             |||| |||||||| |||| |||||||||||||
Sbjct: 30025 tctttgccgcctcctcttccttctcctctcct 29994
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>gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosome 12, complete
             sequence
          Length = 157435

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    atacaaattctcttggcatt 33
             ||||||||||||||||||||
Sbjct: 65440 atacaaattctcttggcatt 65459
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>gb|AY310789.1| Nicotiana benthamiana clone 10-186 unknown mRNA
          Length = 2317

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 cctcatctttcttctcctct 208
           ||||||||||||||||||||
Sbjct: 736 cctcatctttcttctcctct 717
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>gb|AY310781.1| Nicotiana benthamiana clone 9-037 unknown mRNA
          Length = 1906

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 cctcatctttcttctcctct 208
           ||||||||||||||||||||
Sbjct: 326 cctcatctttcttctcctct 307
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>gb|AC161582.4| Monodelphis domestica, clone XX-27C10, complete sequence
          Length = 139570

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   tcccatcttcaggcttgtct 178
             ||||||||||||||||||||
Sbjct: 14078 tcccatcttcaggcttgtct 14059
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>emb|AL591845.27| Human DNA sequence from clone RP11-268J15 on chromosome 1 Contains the
             3' end of a novel gene for thyroid hormone
             receptor-associated protein, 150 kDa subunit (TRAP150)
             (FLJ22082), a novel transcript (FLJ22938), a gene for a
             novel protein (FLJ10647), the 3' end of a gene for
             Ser/Thr-like kinase (MGC4796) and two CpG islands,
             complete sequence
          Length = 104307

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 334   accagacgcctctgcgtcct 353
             ||||||||||||||||||||
Sbjct: 43720 accagacgcctctgcgtcct 43739
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 389     tcatctgcagcagcttctgc 408
               ||||||||||||||||||||
Sbjct: 4324636 tcatctgcagcagcttctgc 4324655
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>emb|AL031675.4|HS751L1 Human DNA sequence from clone RP4-751L1 on chromosome 20p11.2-12.1
             Contains part of the PCSK2 gene for proprotein convertase
             subtilisin/kexin type 2, complete sequence
          Length = 89521

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   atgatctgtcttcaaacact 316
             ||||||||||||||||||||
Sbjct: 70256 atgatctgtcttcaaacact 70237
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>emb|AL009178.4|HS431P23 Human DNA sequence from clone RP3-431P23 on chromosome 6q27 Contains
             the 5' end of the MLLT4 gene for myeloid/lymphoid or
             mixed-lineage leukemia (trithorax (Drosophila) homolog)
             translocated gene protein 4 (AF-6, Afadin, ALL-1 fusion
             partner), genes HGC6.4 and HGC6.2, a serine
             palmitoyltransferase long chain base subunit 2 (SPTLC2)
             (LCB2) pseudogene and two CpG islands, complete sequence
          Length = 147971

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    gcagctaatgcaggcaatcttctt 116
             |||||||||||||||||| |||||
Sbjct: 57979 gcagctaatgcaggcaattttctt 58002
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>gb|BC008189.1| Mus musculus, clone IMAGE:3584589, mRNA, partial cds
          Length = 1728

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 cctcatctttcttctcctct 208
           ||||||||||||||||||||
Sbjct: 70  cctcatctttcttctcctct 51
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>dbj|AK148842.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
            full-length enriched library, clone:7120454A02
            product:unclassifiable, full insert sequence
          Length = 2290

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aattctcttggcatttgagt 38
            ||||||||||||||||||||
Sbjct: 1683 aattctcttggcatttgagt 1702
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>ref|XM_689365.1| PREDICTED: Danio rerio similar to [Carassius auratus gene, complete
            cds.], gene product (LOC566097), mRNA
          Length = 2172

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 189  cctcatctttcttctcctctcctt 212
            ||||||||| ||||||||||||||
Sbjct: 1639 cctcatcttccttctcctctcctt 1616
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>gb|AC104195.10| Mus musculus chromosome 5, clone RP24-95O4, complete sequence
          Length = 214251

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aattctcttggcatttgagt 38
             ||||||||||||||||||||
Sbjct: 58044 aattctcttggcatttgagt 58063
to top
>dbj|AK041514.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630018G05 product:weakly similar to CDNA
           FLJ12697 FIS, CLONE NT2RP1000522, WEAKLY SIMILAR TO
           UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC
           3.1.2.15) (FRAGMENT) [Homo sapiens], full insert
           sequence
          Length = 2554

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 388 gtcatctgcagcagcttctg 407
           ||||||||||||||||||||
Sbjct: 240 gtcatctgcagcagcttctg 221
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>gb|AC103644.15| Mus musculus chromosome 7, clone RP24-361F3, complete sequence
          Length = 171338

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 392    tctgcagcagcttctgccat 411
              ||||||||||||||||||||
Sbjct: 125273 tctgcagcagcttctgccat 125254
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>emb|BX005158.8| Zebrafish DNA sequence from clone DKEY-222N6 in linkage group 8,
             complete sequence
          Length = 74638

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 189   cctcatctttcttctcctctcctt 212
             ||||||||| ||||||||||||||
Sbjct: 10133 cctcatcttccttctcctctcctt 10156
to top
>gb|AC006924.3|AC006924 Homo sapiens, clone hRPK.32_A_1, complete sequence
          Length = 165633

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    gcagctaatgcaggcaatcttctt 116
             |||| |||||||||||||||||||
Sbjct: 42833 gcaggtaatgcaggcaatcttctt 42856
to top
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 392     tctgcagcagcttctgccat 411
               ||||||||||||||||||||
Sbjct: 1521748 tctgcagcagcttctgccat 1521767
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>emb|CT009764.9| Mouse DNA sequence from clone RP23-173E21 on chromosome 12, complete
            sequence
          Length = 214925

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   atacaaattctcttggcatt 33
            ||||||||||||||||||||
Sbjct: 4519 atacaaattctcttggcatt 4500
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>ref|NM_029749.1| Mus musculus ubiquitin specific peptidase 42 (Usp42), mRNA
          Length = 4456

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  gtcatctgcagcagcttctg 407
            ||||||||||||||||||||
Sbjct: 1988 gtcatctgcagcagcttctg 1969
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>gb|M96549.1|TOMHSC80P Tomato heat shock cognate protein 80 gene, 3' end
          Length = 3535

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  cctcatctttcttctcctct 208
            ||||||||||||||||||||
Sbjct: 1938 cctcatctttcttctcctct 1919
to top
>gb|AC160060.20| Mus musculus 10 BAC RP23-360L4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 229681

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    gcttctgccatagcagcatc 420
              ||||||||||||||||||||
Sbjct: 178286 gcttctgccatagcagcatc 178267
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>gb|DQ252488.1| Solanum tuberosum clone 054G03 Hsp90-2-like mRNA, complete cds
          Length = 2188

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 189 cctcatctttcttctcctct 208
           ||||||||||||||||||||
Sbjct: 767 cctcatctttcttctcctct 748
to top
>dbj|AB016897.1| Homo sapiens genomic DNA, chromosome 6q27, complete sequence
          Length = 331211

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 93    gcagctaatgcaggcaatcttctt 116
             |||||||||||||||||| |||||
Sbjct: 87003 gcagctaatgcaggcaattttctt 86980


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,604,888
Number of Sequences: 3902068
Number of extensions: 4604888
Number of successful extensions: 100371
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100194
Number of HSP's gapped (non-prelim): 175
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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