Clone Name | rbart07d04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | METZ_PSEAE (P55218) O-succinylhomoserine sulfhydrylase (EC 2.5.1... | 34 | 0.16 | 2 | MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-meth... | 33 | 0.27 | 3 | RF2_THEMA (Q9X1R5) Peptide chain release factor 2 (RF-2) | 28 | 6.7 | 4 | ACOX_PICPA (Q9Y7B1) Acyl-coenzyme A oxidase (EC 1.3.3.6) (Acyl-C... | 28 | 8.8 |
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>METZ_PSEAE (P55218) O-succinylhomoserine sulfhydrylase (EC 2.5.1.-) (OSH| sulfhydrylase) Length = 403 Score = 33.9 bits (76), Expect = 0.16 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = -2 Query: 408 STSSEMDPEDRARAGISPGLIRMSVGYNGTXEQRWAQFERALALM 274 ++ + PEDRARAGI LIR++VG + + A R LA + Sbjct: 360 TSHGRLSPEDRARAGIGDSLIRVAVGLEDLDDLK-ADMARGLAAL 403
>MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-methioninase)| Length = 398 Score = 33.1 bits (74), Expect = 0.27 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -2 Query: 405 TSSEMDPEDRARAGISPGLIRMSVG 331 T S PE+RA GIS GL+R+SVG Sbjct: 355 THSSYTPEERAHYGISEGLVRLSVG 379
>RF2_THEMA (Q9X1R5) Peptide chain release factor 2 (RF-2)| Length = 369 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%) Frame = +2 Query: 152 LSWG*E--EYIFLKYTMSRHHRFGGQTA 229 +SWG + YIF YTM + HR G +TA Sbjct: 316 ISWGNQIRSYIFHPYTMVKDHRTGVETA 343
>ACOX_PICPA (Q9Y7B1) Acyl-coenzyme A oxidase (EC 1.3.3.6) (Acyl-CoA oxidase)| Length = 719 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -2 Query: 393 MDPEDRARAGISPGLIRMSVGYNGTXEQ-RWAQFERALALMQ 271 +DP+ R G+ GL ++ NGT EQ ++ FER A ++ Sbjct: 106 VDPQLGTRVGVHLGLFLSAIRGNGTEEQFKYWAFERGAAYLK 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,072,360 Number of Sequences: 219361 Number of extensions: 615406 Number of successful extensions: 1150 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1150 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)