ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart07c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome... 151 2e-33
2ref|XM_475211.1| Oryza sativa (japonica cultivar-group), predic... 151 2e-33
3gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome... 151 2e-33
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
5dbj|AK099640.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
6dbj|AK062566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
7gb|AC078809.9| Homo sapiens 3 BAC RP11-600G3 (Roswell Park Cance... 46 0.098
8gb|AC091627.2| Solanum demissum chromosome 11 BAC PGEC513 genomi... 42 1.5
9ref|XM_545749.2| PREDICTED: Canis familiaris similar to coxsacki... 42 1.5
10emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L... 42 1.5
11gb|AC098848.7| Homo sapiens chromosome 18, clone RP11-839G9, com... 42 1.5
12gb|AC117871.5| Rattus norvegicus X BAC CH230-335H24 (Children's ... 42 1.5
13dbj|AP003160.1| Homo sapiens genomic DNA, chromosome 1p36 clone:... 42 1.5
14ref|NM_146718.1| Mus musculus olfactory receptor 430 (Olfr430), ... 40 6.1
15gb|AC163449.2| Mus musculus chromosome 3, clone RP23-193H21, com... 40 6.1
16ref|XM_323359.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.1
17ref|XM_952563.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.1
18gb|AC100893.13| Mus musculus chromosome 8, clone RP23-68I8, comp... 40 6.1
19gb|AC159993.10| Mus musculus chromosome 8, clone RP23-39P7, comp... 40 6.1
20gb|AY317535.1| Mus musculus olfactory receptor Olfr430 (Olfr430)... 40 6.1
21gb|AC156985.12| Mus musculus chromosome 7, clone RP23-417L14, co... 40 6.1
22gb|AC165238.5| Mus musculus chromosome 3, clone RP23-466A3, comp... 40 6.1
23gb|AC113483.7| Mus musculus chromosome 1, clone RP23-343E12, com... 40 6.1
24emb|CT025688.6| Mouse DNA sequence from clone RP24-310A8 on chro... 40 6.1
25emb|CR694090.1|CNS0FYIE Tetraodon nigroviridis full-length cDNA 40 6.1
26ref|XM_660351.1| Cryptosporidium hominis TU502 hypothetical prot... 40 6.1
27gb|AC101663.10| Mus musculus chromosome 1, clone RP23-37L1, comp... 40 6.1
28emb|AL513206.6| Human DNA sequence from clone RP11-382F13 on chr... 40 6.1
29emb|X72787.1|SGNUSG S.griseus nusG, rplKAJL gene cluster 40 6.1
30gb|AC087499.12| Homo sapiens chromosome 17, clone RP11-218E15, c... 40 6.1
31emb|BX897678.1| Neurospora crassa DNA linkage group VI BAC clone... 40 6.1
32emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
33emb|BX321911.6| Mouse DNA sequence from clone RP23-255M6 on chro... 40 6.1
34gb|AC104024.8| Homo sapiens chromosome 17, clone RP11-416I2, com... 40 6.1
35ref|NM_001000082.1| Rattus norvegicus olfactory receptor 1588 (p... 40 6.1
36gb|AC079111.7| Homo sapiens chromosome 17, clone RP11-367G9, com... 40 6.1
37dbj|AK125737.1| Homo sapiens cDNA FLJ43749 fis, clone TESTI2034749 40 6.1
38gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21... 40 6.1
39emb|BX571940.12| Zebrafish DNA sequence from clone DKEY-171N3 in... 40 6.1
40gb|AY073377.1| Mus musculus olfactory receptor MOR105-5P gene, c... 40 6.1
41gb|AC021205.6| Homo sapiens BAC clone RP11-170N16 from 4, comple... 40 6.1
42gb|AC162927.3| Mus musculus BAC clone RP23-269E12 from chromosom... 40 6.1
43tpg|BK001591.1| TPA: TPA_exp: Homo sapiens chromosome 17 proxima... 40 6.1
44tpg|BK001589.1| TPA: TPA_exp: Homo sapiens chromosome 17 distal ... 40 6.1
45dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
46dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
47gb|AC157217.2| Pan troglodytes BAC clone CH251-305B5 from chromo... 40 6.1
48gb|AC126352.6| Homo sapiens chromosome 17, clone CTD-2509K7, com... 40 6.1
49gb|AC015818.32| Homo sapiens chromosome 17, clone RP11-434D2, co... 40 6.1
50gb|AC022596.9|AC022596 Homo sapiens chromosome 17, clone RP11-21... 40 6.1
51ref|NM_001013708.1| Homo sapiens LOC440570 (LOC440570), mRNA 40 6.1
52dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
53dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
54dbj|AP000606.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 6.1
55dbj|AK107413.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
56dbj|AK073937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
57gb|AC155928.2| Mus musculus BAC clone RP24-70N20 from 9, complet... 40 6.1
58gb|AC144773.3| Mus musculus BAC clone RP24-176P22 from 1, comple... 40 6.1
59gb|AC104928.8| Mus musculus chromosome 8, clone RP24-111K8, comp... 40 6.1
60gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, co... 40 6.1
61gb|AC162521.4| Mus musculus chromosome 7, clone RP23-356O13, com... 40 6.1
62gb|AC120846.16| Mus musculus chromosome 7, clone RP24-317L6, com... 40 6.1
63gb|BC106774.1| Mus musculus olfactory receptor 430, mRNA (cDNA c... 40 6.1
64gb|BC106773.1| Mus musculus olfactory receptor 430, mRNA (cDNA c... 40 6.1
65gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, compl... 40 6.1
66gb|AC131739.3| Mus musculus BAC clone RP23-97B15 from 13, comple... 40 6.1
67emb|AL353996.3|HS48J14 Homo sapiens chromosome 17 sequence from ... 40 6.1
68emb|AL928737.8| Mouse DNA sequence from clone RP23-382O14 on chr... 40 6.1
69emb|AL732448.6| Mouse DNA sequence from clone RP23-116F12 on chr... 40 6.1 
>gb|AC137928.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0040B10,
             complete sequence
          Length = 150825

 Score =  151 bits (76), Expect = 2e-33
 Identities = 100/108 (92%)
 Strand = Plus / Minus

                                                                         
Query: 341   ttagcccctccattccgggcactggtcggccggccgcgtgttctgcgtgccggccttaat 400
             |||||||||||| ||||||||||||||||||||||| ||||||  || ||||||||| | 
Sbjct: 14211 ttagcccctccactccgggcactggtcggccggccgggtgttcgtcgagccggccttgag 14152

                                                             
Query: 401   cgggcacggcgcgtacaccggcggcaccatgcagttgtacatcaggca 448
             |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 14151 cgggcacggcgcgtacaccggcggcaccatgcagttgtacatgaggca 14104



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                           
Query: 200   ttaatcaaagaatcagagaccaccgtttgcaatctcctccattctt 245
             |||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 14329 ttaatcaaagaatcggagaccgccatttgcaatctcctccattctt 14284
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>ref|XM_475211.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1185

 Score =  151 bits (76), Expect = 2e-33
 Identities = 100/108 (92%)
 Strand = Plus / Minus

                                                                        
Query: 341  ttagcccctccattccgggcactggtcggccggccgcgtgttctgcgtgccggccttaat 400
            |||||||||||| ||||||||||||||||||||||| ||||||  || ||||||||| | 
Sbjct: 1185 ttagcccctccactccgggcactggtcggccggccgggtgttcgtcgagccggccttgag 1126

                                                            
Query: 401  cgggcacggcgcgtacaccggcggcaccatgcagttgtacatcaggca 448
            |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1125 cgggcacggcgcgtacaccggcggcaccatgcagttgtacatgaggca 1078
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>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1657_H11,
             complete sequence
          Length = 98103

 Score =  151 bits (76), Expect = 2e-33
 Identities = 100/108 (92%)
 Strand = Plus / Minus

                                                                         
Query: 341   ttagcccctccattccgggcactggtcggccggccgcgtgttctgcgtgccggccttaat 400
             |||||||||||| ||||||||||||||||||||||| ||||||  || ||||||||| | 
Sbjct: 51138 ttagcccctccactccgggcactggtcggccggccgggtgttcgtcgagccggccttgag 51079

                                                             
Query: 401   cgggcacggcgcgtacaccggcggcaccatgcagttgtacatcaggca 448
             |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 51078 cgggcacggcgcgtacaccggcggcaccatgcagttgtacatgaggca 51031



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                           
Query: 200   ttaatcaaagaatcagagaccaccgtttgcaatctcctccattctt 245
             |||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 51256 ttaatcaaagaatcggagaccgccatttgcaatctcctccattctt 51211
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  151 bits (76), Expect = 2e-33
 Identities = 100/108 (92%)
 Strand = Plus / Minus

                                                                            
Query: 341      ttagcccctccattccgggcactggtcggccggccgcgtgttctgcgtgccggccttaat 400
                |||||||||||| ||||||||||||||||||||||| ||||||  || ||||||||| | 
Sbjct: 19686137 ttagcccctccactccgggcactggtcggccggccgggtgttcgtcgagccggccttgag 19686078

                                                                
Query: 401      cgggcacggcgcgtacaccggcggcaccatgcagttgtacatcaggca 448
                |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 19686077 cgggcacggcgcgtacaccggcggcaccatgcagttgtacatgaggca 19686030



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 200      ttaatcaaagaatcagagaccaccgtttgcaatctcctccattctt 245
                |||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 19686255 ttaatcaaagaatcggagaccgccatttgcaatctcctccattctt 19686210
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>dbj|AK099640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060B14, full
            insert sequence
          Length = 2348

 Score =  151 bits (76), Expect = 2e-33
 Identities = 100/108 (92%)
 Strand = Plus / Minus

                                                                        
Query: 341  ttagcccctccattccgggcactggtcggccggccgcgtgttctgcgtgccggccttaat 400
            |||||||||||| ||||||||||||||||||||||| ||||||  || ||||||||| | 
Sbjct: 1902 ttagcccctccactccgggcactggtcggccggccgggtgttcgtcgagccggccttgag 1843

                                                            
Query: 401  cgggcacggcgcgtacaccggcggcaccatgcagttgtacatcaggca 448
            |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1842 cgggcacggcgcgtacaccggcggcaccatgcagttgtacatgaggca 1795



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 200  ttaatcaaagaatcagagaccaccgtttgcaatctcctccattctt 245
            |||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 2020 ttaatcaaagaatcggagaccgccatttgcaatctcctccattctt 1975
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>dbj|AK062566.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H08, full
            insert sequence
          Length = 1777

 Score =  151 bits (76), Expect = 2e-33
 Identities = 100/108 (92%)
 Strand = Plus / Minus

                                                                        
Query: 341  ttagcccctccattccgggcactggtcggccggccgcgtgttctgcgtgccggccttaat 400
            |||||||||||| ||||||||||||||||||||||| ||||||  || ||||||||| | 
Sbjct: 1303 ttagcccctccactccgggcactggtcggccggccgggtgttcgtcgagccggccttgag 1244

                                                            
Query: 401  cgggcacggcgcgtacaccggcggcaccatgcagttgtacatcaggca 448
            |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1243 cgggcacggcgcgtacaccggcggcaccatgcagttgtacatgaggca 1196



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 200  ttaatcaaagaatcagagaccaccgtttgcaatctcctccattctt 245
            |||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 1421 ttaatcaaagaatcggagaccgccatttgcaatctcctccattctt 1376
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>gb|AC078809.9| Homo sapiens 3 BAC RP11-600G3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 162646

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 22    cacttcttactcactcactgtct 44
             |||||||||||||||||||||||
Sbjct: 15721 cacttcttactcactcactgtct 15743
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>gb|AC091627.2| Solanum demissum chromosome 11 BAC PGEC513 genomic sequence, complete
             sequence
          Length = 77821

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 184   agtaaacttgacaaatttaat 204
             |||||||||||||||||||||
Sbjct: 52118 agtaaacttgacaaatttaat 52098



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   agtaaacttgacaaatttaa 203
             ||||||||||||||||||||
Sbjct: 42276 agtaaacttgacaaatttaa 42257
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>ref|XM_545749.2| PREDICTED: Canis familiaris similar to coxsackie virus and adenovirus
            receptor (LOC488632), mRNA
          Length = 3336

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 293  ctgccttctgcttctggttct 313
            |||||||||||||||||||||
Sbjct: 1180 ctgccttctgcttctggttct 1160
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>emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L3 on chromosome 1p35.1-36.13
             Contains a novel gene, the gene for a novel protein
             (LOC374960), a ribosomal protein S14 (RPS14) pseudogene,
             the NBL1 gene for neuroblastoma suppression of
             tumorigenicity 1, the HTR6 gene for 5-hydroxytryptamine
             (serotonin) receptor 6, the 3' end of the gene for a novel
             protein (LOC255104) (FLJ45636) and two CpG islands,
             complete sequence
          Length = 163848

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   caacttcttgtgtctgtgact 147
             |||||||||||||||||||||
Sbjct: 49640 caacttcttgtgtctgtgact 49660
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>gb|AC098848.7| Homo sapiens chromosome 18, clone RP11-839G9, complete sequence
          Length = 189315

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 50    acagagacacaagcacatacactta 74
             ||||||||||| |||||||||||||
Sbjct: 37097 acagagacacatgcacatacactta 37121
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>gb|AC117871.5| Rattus norvegicus X BAC CH230-335H24 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 148497

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 155   ccctcacaaaaagaataataa 175
             |||||||||||||||||||||
Sbjct: 97756 ccctcacaaaaagaataataa 97776
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>dbj|AP003160.1| Homo sapiens genomic DNA, chromosome 1p36 clone:956M3, complete
             sequence
          Length = 130080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   caacttcttgtgtctgtgact 147
             |||||||||||||||||||||
Sbjct: 77451 caacttcttgtgtctgtgact 77431
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>ref|NM_146718.1| Mus musculus olfactory receptor 430 (Olfr430), mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 cagcagccagcagccatctt 338
           ||||||||||||||||||||
Sbjct: 392 cagcagccagcagccatctt 373
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>gb|AC163449.2| Mus musculus chromosome 3, clone RP23-193H21, complete sequence
          Length = 199224

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   cttcttgtgtctgtgactat 149
             ||||||||||||||||||||
Sbjct: 12118 cttcttgtgtctgtgactat 12137
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>ref|XM_323359.1| Neurospora crassa OR74A hypothetical protein (NCU04041.1) partial
            mRNA
          Length = 2418

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 296  ccttctgcttctggttcttggagc 319
            ||||||||||||| ||||||||||
Sbjct: 2233 ccttctgcttctgcttcttggagc 2210
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>ref|XM_952563.1| Neurospora crassa OR74A hypothetical protein (NCU04041.1) partial
            mRNA
          Length = 2418

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 296  ccttctgcttctggttcttggagc 319
            ||||||||||||| ||||||||||
Sbjct: 2233 ccttctgcttctgcttcttggagc 2210
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>gb|AC100893.13| Mus musculus chromosome 8, clone RP23-68I8, complete sequence
          Length = 253420

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    agcaccaacttcttgtgtct 141
              ||||||||||||||||||||
Sbjct: 132824 agcaccaacttcttgtgtct 132805
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>gb|AC159993.10| Mus musculus chromosome 8, clone RP23-39P7, complete sequence
          Length = 211785

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 50    acagagacacaagcacatacacttacac 77
             ||||| |||||||||||||||| |||||
Sbjct: 41171 acagacacacaagcacatacacatacac 41198
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>gb|AY317535.1| Mus musculus olfactory receptor Olfr430 (Olfr430) gene, complete
           cds
          Length = 954

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 cagcagccagcagccatctt 338
           ||||||||||||||||||||
Sbjct: 446 cagcagccagcagccatctt 427
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>gb|AC156985.12| Mus musculus chromosome 7, clone RP23-417L14, complete sequence
          Length = 179492

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ctcctccattcttgtgtcct 252
             ||||||||||||||||||||
Sbjct: 58981 ctcctccattcttgtgtcct 58962
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>gb|AC165238.5| Mus musculus chromosome 3, clone RP23-466A3, complete sequence
          Length = 180939

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   cttcttgtgtctgtgactat 149
             ||||||||||||||||||||
Sbjct: 45884 cttcttgtgtctgtgactat 45865
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>gb|AC113483.7| Mus musculus chromosome 1, clone RP23-343E12, complete sequence
          Length = 207188

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    cagcagccagcagccatctt 338
              ||||||||||||||||||||
Sbjct: 161621 cagcagccagcagccatctt 161640
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>emb|CT025688.6| Mouse DNA sequence from clone RP24-310A8 on chromosome 9, complete
              sequence
          Length = 233365

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    gtttgcaatctcctccattc 243
              ||||||||||||||||||||
Sbjct: 222507 gtttgcaatctcctccattc 222526
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>emb|CR694090.1|CNS0FYIE Tetraodon nigroviridis full-length cDNA
          Length = 1017

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 299 tctgcttctggttcttggagcagc 322
           |||||||||||||||| |||||||
Sbjct: 944 tctgcttctggttcttcgagcagc 921
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>ref|XM_660351.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.60377)
           partial mRNA
          Length = 678

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 177 ccacagtagtaaacttgacaaatt 200
           ||||||||| ||||||||||||||
Sbjct: 387 ccacagtaggaaacttgacaaatt 410
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>gb|AC101663.10| Mus musculus chromosome 1, clone RP23-37L1, complete sequence
          Length = 192592

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ctcctccattcttgtgtcct 252
             ||||||||||||||||||||
Sbjct: 59869 ctcctccattcttgtgtcct 59850
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>emb|AL513206.6| Human DNA sequence from clone RP11-382F13 on chromosome 1 Contains part
             of the VAV3 gene for VAV3 oncogene, complete sequence
          Length = 108124

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   ccagcagccatcttggttag 344
             ||||||||||||||||||||
Sbjct: 65626 ccagcagccatcttggttag 65645
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>emb|X72787.1|SGNUSG S.griseus nusG, rplKAJL gene cluster
          Length = 7235

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 412  cgtacaccggcggcaccatg 431
            ||||||||||||||||||||
Sbjct: 4160 cgtacaccggcggcaccatg 4179
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>gb|AC087499.12| Homo sapiens chromosome 17, clone RP11-218E15, complete sequence
          Length = 195591

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ctatcccctccctcacaaaa 165
             ||||||||||||||||||||
Sbjct: 30640 ctatcccctccctcacaaaa 30659
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>emb|BX897678.1| Neurospora crassa DNA linkage group VI BAC clone B10H18
          Length = 74165

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 296   ccttctgcttctggttcttggagc 319
             ||||||||||||| ||||||||||
Sbjct: 48905 ccttctgcttctgcttcttggagc 48882
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>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12,
             complete sequence
          Length = 179644

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   cttctgcttctggttcttgg 316
             ||||||||||||||||||||
Sbjct: 75220 cttctgcttctggttcttgg 75201
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>emb|BX321911.6| Mouse DNA sequence from clone RP23-255M6 on chromosome 11 Contains a
             ribosomal protein L22 (Rpl22) pseudogene, complete
             sequence
          Length = 56399

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 56    acacaagcacatacacttacacca 79
             |||||||||||||||| |||||||
Sbjct: 52691 acacaagcacatacacatacacca 52714
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>gb|AC104024.8| Homo sapiens chromosome 17, clone RP11-416I2, complete sequence
          Length = 97645

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ctatcccctccctcacaaaa 165
             ||||||||||||||||||||
Sbjct: 12871 ctatcccctccctcacaaaa 12890
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>ref|NM_001000082.1| Rattus norvegicus olfactory receptor 1588 (predicted)
           (Olr1588_predicted), mRNA
          Length = 954

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 cagcagccagcagccatctt 338
           ||||||||||||||||||||
Sbjct: 446 cagcagccagcagccatctt 427
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>gb|AC079111.7| Homo sapiens chromosome 17, clone RP11-367G9, complete sequence
          Length = 163410

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ctatcccctccctcacaaaa 165
             ||||||||||||||||||||
Sbjct: 20541 ctatcccctccctcacaaaa 20522
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>dbj|AK125737.1| Homo sapiens cDNA FLJ43749 fis, clone TESTI2034749
          Length = 2515

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 298  ttctgcttctggttcttggagcag 321
            |||||||||||| |||||||||||
Sbjct: 1792 ttctgcttctggctcttggagcag 1769
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>gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21H13, complete sequence
          Length = 101563

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 417   accggcggcaccatgcagttgtac 440
             |||||||||||||| |||||||||
Sbjct: 11110 accggcggcaccatacagttgtac 11087
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>emb|BX571940.12| Zebrafish DNA sequence from clone DKEY-171N3 in linkage group 14,
              complete sequence
          Length = 179550

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    ttctggttcttggagcagca 323
              ||||||||||||||||||||
Sbjct: 117605 ttctggttcttggagcagca 117624
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>gb|AY073377.1| Mus musculus olfactory receptor MOR105-5P gene, complete cds
          Length = 900

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 cagcagccagcagccatctt 338
           ||||||||||||||||||||
Sbjct: 392 cagcagccagcagccatctt 373
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>gb|AC021205.6| Homo sapiens BAC clone RP11-170N16 from 4, complete sequence
          Length = 178917

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    acaacagagacacaagcaca 66
             ||||||||||||||||||||
Sbjct: 29929 acaacagagacacaagcaca 29910
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>gb|AC162927.3| Mus musculus BAC clone RP23-269E12 from chromosome 9, complete sequence
          Length = 213948

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 50    acagagacacaagcacatacacttacac 77
             |||||||||||| ||||| |||||||||
Sbjct: 27903 acagagacacaaacacatgcacttacac 27930
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>tpg|BK001591.1| TPA: TPA_exp: Homo sapiens chromosome 17 proximal SMS-REP low-copy
              repeat, genomic sequence
          Length = 255901

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    ctatcccctccctcacaaaa 165
              ||||||||||||||||||||
Sbjct: 248555 ctatcccctccctcacaaaa 248574
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>tpg|BK001589.1| TPA: TPA_exp: Homo sapiens chromosome 17 distal SMS-REP low-copy repeat,
              genomic sequence
          Length = 176482

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    ctatcccctccctcacaaaa 165
              ||||||||||||||||||||
Sbjct: 169128 ctatcccctccctcacaaaa 169147
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 297      cttctgcttctggttcttgg 316
                ||||||||||||||||||||
Sbjct: 29938468 cttctgcttctggttcttgg 29938449
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 406      acggcgcgtacaccggcggc 425
                ||||||||||||||||||||
Sbjct: 21983625 acggcgcgtacaccggcggc 21983644
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>gb|AC157217.2| Pan troglodytes BAC clone CH251-305B5 from chromosome unknown, complete
              sequence
          Length = 159245

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaacagagacacaagcaca 66
              ||||||||||||||||||||
Sbjct: 134606 acaacagagacacaagcaca 134625
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>gb|AC126352.6| Homo sapiens chromosome 17, clone CTD-2509K7, complete sequence
          Length = 211403

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  ctatcccctccctcacaaaa 165
            ||||||||||||||||||||
Sbjct: 9929 ctatcccctccctcacaaaa 9910
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>gb|AC015818.32| Homo sapiens chromosome 17, clone RP11-434D2, complete sequence
          Length = 194767

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    ctatcccctccctcacaaaa 165
              ||||||||||||||||||||
Sbjct: 183411 ctatcccctccctcacaaaa 183430
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>gb|AC022596.9|AC022596 Homo sapiens chromosome 17, clone RP11-219A15, complete sequence
          Length = 192337

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ctatcccctccctcacaaaa 165
             ||||||||||||||||||||
Sbjct: 17966 ctatcccctccctcacaaaa 17947
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>ref|NM_001013708.1| Homo sapiens LOC440570 (LOC440570), mRNA
          Length = 2515

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 298  ttctgcttctggttcttggagcag 321
            |||||||||||| |||||||||||
Sbjct: 1792 ttctgcttctggctcttggagcag 1769
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>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0635G10
          Length = 146728

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   acggcgcgtacaccggcggc 425
             ||||||||||||||||||||
Sbjct: 25689 acggcgcgtacaccggcggc 25708
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>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1065_E04
          Length = 115865

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    acggcgcgtacaccggcggc 425
              ||||||||||||||||||||
Sbjct: 114342 acggcgcgtacaccggcggc 114361
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>dbj|AP000606.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MTO24
          Length = 82360

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    atacaacagagacacaagca 64
             ||||||||||||||||||||
Sbjct: 50800 atacaacagagacacaagca 50819
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>dbj|AK107413.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-E11, full
            insert sequence
          Length = 1814

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  cttctgcttctggttcttgg 316
            ||||||||||||||||||||
Sbjct: 1649 cttctgcttctggttcttgg 1668
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>dbj|AK073937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075G21, full
           insert sequence
          Length = 2570

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 297 cttctgcttctggttcttgg 316
           ||||||||||||||||||||
Sbjct: 122 cttctgcttctggttcttgg 103
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>gb|AC155928.2| Mus musculus BAC clone RP24-70N20 from 9, complete sequence
          Length = 239304

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 50    acagagacacaagcacatacacttacac 77
             |||||||||||| ||||| |||||||||
Sbjct: 12512 acagagacacaaacacatgcacttacac 12485
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>gb|AC144773.3| Mus musculus BAC clone RP24-176P22 from 1, complete sequence
          Length = 167510

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    ctcctccattcttgtgtcct 252
              ||||||||||||||||||||
Sbjct: 150144 ctcctccattcttgtgtcct 150125
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>gb|AC104928.8| Mus musculus chromosome 8, clone RP24-111K8, complete sequence
          Length = 177873

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 50    acagagacacaagcacatacacttacac 77
             ||||| |||||||||||||||| |||||
Sbjct: 57583 acagacacacaagcacatacacatacac 57556
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>gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, complete sequence
          Length = 154308

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 56   acacaagcacatacacttacacca 79
            ||||| ||||||||||||||||||
Sbjct: 3631 acacacgcacatacacttacacca 3654
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>gb|AC162521.4| Mus musculus chromosome 7, clone RP23-356O13, complete sequence
          Length = 207307

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   ctcctccattcttgtgtcct 252
             ||||||||||||||||||||
Sbjct: 14518 ctcctccattcttgtgtcct 14537
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>gb|AC120846.16| Mus musculus chromosome 7, clone RP24-317L6, complete sequence
          Length = 192429

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    ctcctccattcttgtgtcct 252
              ||||||||||||||||||||
Sbjct: 112402 ctcctccattcttgtgtcct 112383
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>gb|BC106774.1| Mus musculus olfactory receptor 430, mRNA (cDNA clone
           IMAGE:40040156), partial cds
          Length = 896

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 cagcagccagcagccatctt 338
           ||||||||||||||||||||
Sbjct: 388 cagcagccagcagccatctt 369
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>gb|BC106773.1| Mus musculus olfactory receptor 430, mRNA (cDNA clone
           IMAGE:40040154), partial cds
          Length = 899

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 cagcagccagcagccatctt 338
           ||||||||||||||||||||
Sbjct: 391 cagcagccagcagccatctt 372
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>gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, complete sequence
          Length = 210193

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    acacaagcacatacacttacacca 79
             ||||| ||||||||||||||||||
Sbjct: 63715 acacacgcacatacacttacacca 63692
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>gb|AC131739.3| Mus musculus BAC clone RP23-97B15 from 13, complete sequence
          Length = 241046

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   ctcctccattcttgtgtcct 252
             ||||||||||||||||||||
Sbjct: 20453 ctcctccattcttgtgtcct 20472
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>emb|AL353996.3|HS48J14 Homo sapiens chromosome 17 sequence from PAC RPCI-1 48J14 region
             D17S842-D17S953 map 17p11.2, complete sequence
          Length = 105982

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ctatcccctccctcacaaaa 165
             ||||||||||||||||||||
Sbjct: 94844 ctatcccctccctcacaaaa 94825
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>emb|AL928737.8| Mouse DNA sequence from clone RP23-382O14 on chromosome 2, complete
              sequence
          Length = 237175

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 294    tgccttctgcttctggttcttgga 317
              |||||||||||||| |||||||||
Sbjct: 219545 tgccttctgcttcttgttcttgga 219568
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>emb|AL732448.6| Mouse DNA sequence from clone RP23-116F12 on chromosome 2, complete
              sequence
          Length = 214210

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     tcacttcttactcactcact 40
              ||||||||||||||||||||
Sbjct: 113126 tcacttcttactcactcact 113107


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,272,020
Number of Sequences: 3902068
Number of extensions: 4272020
Number of successful extensions: 94876
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94637
Number of HSP's gapped (non-prelim): 239
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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