ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart07c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OLF9_MOUSE (Q60885) Olfactory receptor 9 (Olfactory receptor 269... 30 1.8
2CHRD_XENLA (Q91713) Chordin precursor (Organizer-specific secret... 28 5.3

>OLF9_MOUSE (Q60885) Olfactory receptor 9 (Olfactory receptor 269-3) (Odorant|
           receptor M25)
          Length = 312

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 138 QADQFQQLDQVLPLSYTCPSPACIP 64
           QAD F   DQ+L L YT  +P C P
Sbjct: 263 QADSFGNTDQILTLVYTVVTPMCNP 287



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>CHRD_XENLA (Q91713) Chordin precursor (Organizer-specific secreted dorsalizing|
           factor)
          Length = 941

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 99  LSYTCPSPACIPVDLILMYCCK 34
           + + CPSP+C    L+ ++CCK
Sbjct: 93  IKHDCPSPSCANPILLPLHCCK 114


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,244,585
Number of Sequences: 219361
Number of extensions: 295426
Number of successful extensions: 753
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 80,573,946
effective HSP length: 23
effective length of database: 75,528,643
effective search space used: 1812687432
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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