>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 252     ggcgggcattgccgacgcgcc 272
               |||||||||||||||||||||
Sbjct: 1145400 ggcgggcattgccgacgcgcc 1145420

>ref|NM_127943.2| Arabidopsis thaliana GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE
           5); farnesyltranstransferase AT2G23800 (GGPS2) mRNA,
           complete cds
          Length = 1291

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 243 cgcanaagcggcgggcattgccg 265
           |||| ||||||||||||||||||
Sbjct: 486 cgcacaagcggcgggcattgccg 464

>gb|AC112990.7| Mus musculus chromosome 19, clone RP24-317E20, complete sequence
          Length = 183322

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    cctagcacctacaagcagta 191
              ||||||||||||||||||||
Sbjct: 127391 cctagcacctacaagcagta 127410

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 256     ggcattgccgacgcgcctttccgc 279
               |||||| |||||||||||||||||
Sbjct: 2900091 ggcattaccgacgcgcctttccgc 2900114

>ref|NM_143178.1| Drosophila melanogaster CG5886-RA (CG5886), mRNA
          Length = 1888

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 aagtggaggaggagcggcgc 328
           ||||||||||||||||||||
Sbjct: 420 aagtggaggaggagcggcgc 439

>gb|AC004482.3| Arabidopsis thaliana chromosome 2 clone F27L4 map CIC06C07, complete
            sequence
          Length = 92049

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 243  cgcanaagcggcgggcattgccg 265
            |||| ||||||||||||||||||
Sbjct: 8140 cgcacaagcggcgggcattgccg 8118

>gb|AY047502.1| Drosophila melanogaster GH01188 full length cDNA
          Length = 1841

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 aagtggaggaggagcggcgc 328
           ||||||||||||||||||||
Sbjct: 371 aagtggaggaggagcggcgc 390

>gb|AC008209.5|AC008209 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone
              BACR06K17, complete sequence
          Length = 169902

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    aagtggaggaggagcggcgc 328
              ||||||||||||||||||||
Sbjct: 125111 aagtggaggaggagcggcgc 125130

>gb|BT005328.1| Arabidopsis thaliana At2g23800 mRNA, complete cds
          Length = 1131

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 243 cgcanaagcggcgggcattgccg 265
           |||| ||||||||||||||||||
Sbjct: 456 cgcacaagcggcgggcattgccg 434

>gb|AY087521.1| Arabidopsis thaliana clone 36311 mRNA, complete sequence
          Length = 1292

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 243 cgcanaagcggcgggcattgccg 265
           |||| ||||||||||||||||||
Sbjct: 487 cgcacaagcggcgggcattgccg 465

>dbj|D85029.1| Arabidopsis thaliana mRNA for geranylgeranyl pyrophosphate
           synthase, partial cds
          Length = 1245

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 243 cgcanaagcggcgggcattgccg 265
           |||| ||||||||||||||||||
Sbjct: 447 cgcacaagcggcgggcattgccg 425

>dbj|AK117954.1| Arabidopsis thaliana At2g23800 mRNA for putative pregeranylgeranyl
           pyrophosphate synthase, complete cds, clone:
           RAFL19-14-H11
          Length = 1284

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 243 cgcanaagcggcgggcattgccg 265
           |||| ||||||||||||||||||
Sbjct: 486 cgcacaagcggcgggcattgccg 464

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 355     tggccacgcggcgaccgacg 374
               ||||||||||||||||||||
Sbjct: 2058876 tggccacgcggcgaccgacg 2058895

>gb|AE003753.3| Drosophila melanogaster chromosome 3R, section 91 of 118 of the complete
              sequence
          Length = 226793

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    aagtggaggaggagcggcgc 328
              ||||||||||||||||||||
Sbjct: 190896 aagtggaggaggagcggcgc 190915

>gb|AC117797.9| Mus musculus chromosome 19, clone RP24-555M16, complete sequence
          Length = 179740

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    cctagcacctacaagcagta 191
              ||||||||||||||||||||
Sbjct: 152555 cctagcacctacaagcagta 152536


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,698,636
Number of Sequences: 3902068
Number of extensions: 2698636
Number of successful extensions: 80775
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80673
Number of HSP's gapped (non-prelim): 102
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)