ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart07b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK109368.3| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
2dbj|AK073310.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
3dbj|AK069916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
4dbj|AK061376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 123 5e-25
7emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536... 123 5e-25
8emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510... 123 5e-25
9gb|AY110462.1| Zea mays CL7112_1 mRNA sequence 72 2e-09
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.096
11dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.096
12gb|AC134404.17| Mus musculus chromosome 3, clone RP24-321M14, co... 44 0.38
13gb|AC123880.18| Mus musculus chromosome 3, clone RP23-225M12, co... 44 0.38
14ref|NM_001020818.1| Homo sapiens myeloid-associated differentiat... 42 1.5
15gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosom... 42 1.5
16gb|AC121945.2| Mus musculus BAC clone RP24-211I4 from 17, comple... 42 1.5
17gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 42 1.5
18gb|AC008440.9| Homo sapiens chromosome 19 clone CTC-331H23, comp... 42 1.5
19gb|AC008753.9| Homo sapiens chromosome 19 clone CTD-3022G6, comp... 42 1.5
20gb|BC013995.2| Homo sapiens myeloid-associated differentiation m... 42 1.5
21gb|AE010355.1| Methanopyrus kandleri AV19 section 54 of 157 of t... 40 5.9
22gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 5.9
23ref|NM_186383.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
24ref|XM_589552.2| PREDICTED: Bos taurus similar to proline argini... 40 5.9
25gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 5.9
26gb|AE009050.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 5.9
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.9
28gb|AC126440.3| Mus musculus BAC clone RP23-413M14 from chromosom... 40 5.9
29gb|AC091623.2| Sus scrofa clone RP44-183E24, complete sequence 40 5.9
30gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genom... 40 5.9
31emb|AL391602.6| Human DNA sequence from clone RP11-231F10 on chr... 40 5.9
32gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.9
33emb|Y07661.1|HSUSF2 H.sapiens USF2 gene 40 5.9
34emb|X90825.1|HSUSF2AB2 H.sapiens mRNA for USF2a & USF2b, clone P2 40 5.9
35emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.9
36ref|NM_207291.1| Homo sapiens upstream transcription factor 2, c... 40 5.9
37ref|NM_003367.2| Homo sapiens upstream transcription factor 2, c... 40 5.9
38gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.9
39gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.9
40emb|CR612281.1| full-length cDNA clone CS0DK010YE20 of HeLa cell... 40 5.9
41gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold 40 5.9
42gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.9
43gb|AC025824.37| Homo sapiens chromosome 15 clone RP11-430M3, com... 40 5.9
44gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 5.9
45gb|AC091580.11| Homo sapiens chromosome 15, clone RP11-304N14, c... 40 5.9
46gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, co... 40 5.9
47gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.9
48dbj|AK158906.1| Mus musculus visual cortex cDNA, RIKEN full-leng... 40 5.9
49gb|AC010837.2| Homo sapiens chromosome 18, clone RP11-307E5, com... 40 5.9
50gb|AD000684.1|CH19R30879 Homo sapiens DNA from chromosome 19-cos... 40 5.9
51dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
52dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
53dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
54dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
55dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
56dbj|AP000055.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 5.9
57gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome... 40 5.9
58gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094... 40 5.9
59dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.9
60dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
61dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
62dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
63dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
64dbj|BS000191.1| Pan troglodytes chromosome 22 clone:PTB-015O01, ... 40 5.9
65dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
66emb|Y08849.1|MKMCHGENE M.kandleri mch gene 40 5.9
67gb|U12282.1|MMUSF2S1 Mus musculus transcription factor USF2 (USF... 40 5.9
68gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,... 40 5.9
69dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
70emb|X77602.1|MMUSF217 M.musculus USF2 gene (exons 1-7) 40 5.9
71dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.9
72gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.9
73emb|Z84492.2|HSLUCA11 Human DNA sequence from clone XXcos-11 on ... 40 5.9
74gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
75dbj|AP000329.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.9
76dbj|AP000170.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.9 
>dbj|AK109368.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D03, full
            insert sequence
          Length = 1826

 Score =  135 bits (68), Expect = 1e-28
 Identities = 183/222 (82%)
 Strand = Plus / Minus

                                                                        
Query: 143  tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggcgaccacnaanat 202
            |||||||||| ||| |||||| || || |||||||| | |  ||||||||| || || ||
Sbjct: 1480 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 1421

                                                                        
Query: 203  gaagagcatgctccccagcagcgtgtacgtcctcctcgacgacctccggtactccccgaa 262
            ||| |||||||||||||| || ||||| |||| || |||||| ||||||||||| |||||
Sbjct: 1420 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 1361

                                                                        
Query: 263  cagcaccacgccccagaacgtgctcaccagcggcagcgcctgcacggagtccgccgccgc 322
            |||||| |  ||||| | ||||||||||||||||| |||||| || | ||| || || ||
Sbjct: 1360 cagcacgatcccccacaccgtgctcaccagcggcaacgcctggacagcgtcagcagcagc 1301

                                                      
Query: 323  gtacccggccgcctgcccggccatgaacgtgaacgcgttgcc 364
             ||||| || |||||||| |||||||||  |||||| |||||
Sbjct: 1300 atacccagcagcctgcccagccatgaactggaacgcattgcc 1259
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>dbj|AK073310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030F01, full
            insert sequence
          Length = 2721

 Score =  135 bits (68), Expect = 1e-28
 Identities = 183/222 (82%)
 Strand = Plus / Minus

                                                                        
Query: 143  tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggcgaccacnaanat 202
            |||||||||| ||| |||||| || || |||||||| | |  ||||||||| || || ||
Sbjct: 2375 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 2316

                                                                        
Query: 203  gaagagcatgctccccagcagcgtgtacgtcctcctcgacgacctccggtactccccgaa 262
            ||| |||||||||||||| || ||||| |||| || |||||| ||||||||||| |||||
Sbjct: 2315 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 2256

                                                                        
Query: 263  cagcaccacgccccagaacgtgctcaccagcggcagcgcctgcacggagtccgccgccgc 322
            |||||| |  ||||| | ||||||||||||||||| |||||| || | ||| || || ||
Sbjct: 2255 cagcacgatcccccacaccgtgctcaccagcggcaacgcctggacagcgtcagcagcagc 2196

                                                      
Query: 323  gtacccggccgcctgcccggccatgaacgtgaacgcgttgcc 364
             ||||| || |||||||| |||||||||  |||||| |||||
Sbjct: 2195 atacccagcagcctgcccagccatgaactggaacgcattgcc 2154
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>dbj|AK069916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C16, full
            insert sequence
          Length = 2118

 Score =  135 bits (68), Expect = 1e-28
 Identities = 183/222 (82%)
 Strand = Plus / Minus

                                                                        
Query: 143  tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggcgaccacnaanat 202
            |||||||||| ||| |||||| || || |||||||| | |  ||||||||| || || ||
Sbjct: 1492 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 1433

                                                                        
Query: 203  gaagagcatgctccccagcagcgtgtacgtcctcctcgacgacctccggtactccccgaa 262
            ||| |||||||||||||| || ||||| |||| || |||||| ||||||||||| |||||
Sbjct: 1432 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 1373

                                                                        
Query: 263  cagcaccacgccccagaacgtgctcaccagcggcagcgcctgcacggagtccgccgccgc 322
            |||||| |  ||||| | ||||||||||||||||| |||||| || | ||| || || ||
Sbjct: 1372 cagcacgatcccccacaccgtgctcaccagcggcaacgcctggacagcgtcagcagcagc 1313

                                                      
Query: 323  gtacccggccgcctgcccggccatgaacgtgaacgcgttgcc 364
             ||||| || |||||||| |||||||||  |||||| |||||
Sbjct: 1312 atacccagcagcctgcccagccatgaactggaacgcattgcc 1271
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>dbj|AK061376.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-G07, full
            insert sequence
          Length = 1828

 Score =  135 bits (68), Expect = 1e-28
 Identities = 183/222 (82%)
 Strand = Plus / Minus

                                                                        
Query: 143  tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggcgaccacnaanat 202
            |||||||||| ||| |||||| || || |||||||| | |  ||||||||| || || ||
Sbjct: 1480 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 1421

                                                                        
Query: 203  gaagagcatgctccccagcagcgtgtacgtcctcctcgacgacctccggtactccccgaa 262
            ||| |||||||||||||| || ||||| |||| || |||||| ||||||||||| |||||
Sbjct: 1420 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 1361

                                                                        
Query: 263  cagcaccacgccccagaacgtgctcaccagcggcagcgcctgcacggagtccgccgccgc 322
            |||||| |  ||||| | ||||||||||||||||| |||||| || | ||| || || ||
Sbjct: 1360 cagcacgatcccccacaccgtgctcaccagcggcaacgcctggacagcgtcagcagcagc 1301

                                                      
Query: 323  gtacccggccgcctgcccggccatgaacgtgaacgcgttgcc 364
             ||||| || |||||||| |||||||||  |||||| |||||
Sbjct: 1300 atacccagcagcctgcccagccatgaactggaacgcattgcc 1259
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  123 bits (62), Expect = 5e-25
 Identities = 138/164 (84%)
 Strand = Plus / Plus

                                                                            
Query: 143      tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggcgaccacnaanat 202
                |||||||||| ||| |||||| || || |||||||| | |  ||||||||| || || ||
Sbjct: 19222153 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 19222212

                                                                            
Query: 203      gaagagcatgctccccagcagcgtgtacgtcctcctcgacgacctccggtactccccgaa 262
                ||| |||||||||||||| || ||||| |||| || |||||| ||||||||||| |||||
Sbjct: 19222213 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 19222272

                                                            
Query: 263      cagcaccacgccccagaacgtgctcaccagcggcagcgcctgca 306
                |||||| |  ||||| | ||||||||||||||||| ||||||||
Sbjct: 19222273 cagcacgatcccccacaccgtgctcaccagcggcaacgcctgca 19222316
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  123 bits (62), Expect = 5e-25
 Identities = 138/164 (84%)
 Strand = Plus / Plus

                                                                            
Query: 143      tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggcgaccacnaanat 202
                |||||||||| ||| |||||| || || |||||||| | |  ||||||||| || || ||
Sbjct: 19148380 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 19148439

                                                                            
Query: 203      gaagagcatgctccccagcagcgtgtacgtcctcctcgacgacctccggtactccccgaa 262
                ||| |||||||||||||| || ||||| |||| || |||||| ||||||||||| |||||
Sbjct: 19148440 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 19148499

                                                            
Query: 263      cagcaccacgccccagaacgtgctcaccagcggcagcgcctgca 306
                |||||| |  ||||| | ||||||||||||||||| ||||||||
Sbjct: 19148500 cagcacgatcccccacaccgtgctcaccagcggcaacgcctgca 19148543
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>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 127026

 Score =  123 bits (62), Expect = 5e-25
 Identities = 138/164 (84%)
 Strand = Plus / Minus

                                                                        
Query: 143  tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggcgaccacnaanat 202
            |||||||||| ||| |||||| || || |||||||| | |  ||||||||| || || ||
Sbjct: 3792 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 3733

                                                                        
Query: 203  gaagagcatgctccccagcagcgtgtacgtcctcctcgacgacctccggtactccccgaa 262
            ||| |||||||||||||| || ||||| |||| || |||||| ||||||||||| |||||
Sbjct: 3732 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 3673

                                                        
Query: 263  cagcaccacgccccagaacgtgctcaccagcggcagcgcctgca 306
            |||||| |  ||||| | ||||||||||||||||| ||||||||
Sbjct: 3672 cagcacgatcccccacaccgtgctcaccagcggcaacgcctgca 3629
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>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136155

 Score =  123 bits (62), Expect = 5e-25
 Identities = 138/164 (84%)
 Strand = Plus / Plus

                                                                         
Query: 143   tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggcgaccacnaanat 202
             |||||||||| ||| |||||| || || |||||||| | |  ||||||||| || || ||
Sbjct: 55483 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 55542

                                                                         
Query: 203   gaagagcatgctccccagcagcgtgtacgtcctcctcgacgacctccggtactccccgaa 262
             ||| |||||||||||||| || ||||| |||| || |||||| ||||||||||| |||||
Sbjct: 55543 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 55602

                                                         
Query: 263   cagcaccacgccccagaacgtgctcaccagcggcagcgcctgca 306
             |||||| |  ||||| | ||||||||||||||||| ||||||||
Sbjct: 55603 cagcacgatcccccacaccgtgctcaccagcggcaacgcctgca 55646
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>gb|AY110462.1| Zea mays CL7112_1 mRNA sequence
          Length = 752

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgacctccggtactccccgaacagcaccacgccccagaacgtgctcaccagcggcag 298
           ||||||| | |||||||||||||| ||||  ||||||||||| ||||| || ||||||||
Sbjct: 707 cgacgacttgcggtactccccgaagagcagtacgccccagaaggtgctgacgagcggcag 648

                                                               
Query: 299 cgcctgcacggagtccgccgccgcgtacccggccgcctgcccggccatgaac 350
            ||||| || | ||| || || |||||||| || ||||| ||| ||||||||
Sbjct: 647 ggcctggacagcgtcagcggcggcgtaccctgctgcctggccgcccatgaac 596
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 388      gcagcgcccgccccctcccctcc 410
                |||||||||||||||||||||||
Sbjct: 30232679 gcagcgcccgccccctcccctcc 30232701



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 394      cccgccccctcccctccccg 413
                ||||||||||||||||||||
Sbjct: 11963541 cccgccccctcccctccccg 11963560



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 394      cccgccccctcccctccccg 413
                ||||||||||||||||||||
Sbjct: 11946216 cccgccccctcccctccccg 11946235
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>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1121A12
          Length = 138796

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 388   gcagcgcccgccccctcccctcc 410
             |||||||||||||||||||||||
Sbjct: 33596 gcagcgcccgccccctcccctcc 33618
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>gb|AC134404.17| Mus musculus chromosome 3, clone RP24-321M14, complete sequence
          Length = 218224

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 393    gcccgccccctcccctccccgtcggc 418
              |||||||||||||||||||| |||||
Sbjct: 184351 gcccgccccctcccctccccctcggc 184326
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>gb|AC123880.18| Mus musculus chromosome 3, clone RP23-225M12, complete sequence
          Length = 224562

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 393   gcccgccccctcccctccccgtcggc 418
             |||||||||||||||||||| |||||
Sbjct: 37985 gcccgccccctcccctccccctcggc 37960
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>ref|NM_001020818.1| Homo sapiens myeloid-associated differentiation marker (MYADM),
           transcript variant 1, mRNA
          Length = 3243

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 394 cccgccccctcccctccccgt 414
           |||||||||||||||||||||
Sbjct: 102 cccgccccctcccctccccgt 82
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>gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosome 17, complete sequence
          Length = 184296

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 67     aagaacttgctagcctctctg 87
              |||||||||||||||||||||
Sbjct: 111832 aagaacttgctagcctctctg 111852
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>gb|AC121945.2| Mus musculus BAC clone RP24-211I4 from 17, complete sequence
          Length = 157262

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    aagaacttgctagcctctctg 87
             |||||||||||||||||||||
Sbjct: 43024 aagaacttgctagcctctctg 43044
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 260     gaacagcaccacgccccagaacgtg 284
               |||||||| ||||||||||||||||
Sbjct: 2417327 gaacagcatcacgccccagaacgtg 2417303
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>gb|AC008440.9| Homo sapiens chromosome 19 clone CTC-331H23, complete sequence
          Length = 169997

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 394   cccgccccctcccctccccgt 414
             |||||||||||||||||||||
Sbjct: 13992 cccgccccctcccctccccgt 13972
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>gb|AC008753.9| Homo sapiens chromosome 19 clone CTD-3022G6, complete sequence
          Length = 147330

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 394    cccgccccctcccctccccgt 414
              |||||||||||||||||||||
Sbjct: 138360 cccgccccctcccctccccgt 138340
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>gb|BC013995.2| Homo sapiens myeloid-associated differentiation marker, mRNA (cDNA
           clone MGC:20205 IMAGE:3627858), complete cds
          Length = 1550

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 394 cccgccccctcccctccccgt 414
           |||||||||||||||||||||
Sbjct: 190 cccgccccctcccctccccgt 170
to top
>gb|AE010355.1| Methanopyrus kandleri AV19 section 54 of 157 of the complete genome
          Length = 11133

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   ctcctcgacgacctccggta 253
             ||||||||||||||||||||
Sbjct: 10868 ctcctcgacgacctccggta 10849
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     accatccccgccagcagcgc 394
               ||||||||||||||||||||
Sbjct: 2587151 accatccccgccagcagcgc 2587132
to top
>ref|NM_186383.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 564

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 caccagcggcagcgcctgca 306
           ||||||||||||||||||||
Sbjct: 360 caccagcggcagcgcctgca 341
to top
>ref|XM_589552.2| PREDICTED: Bos taurus similar to proline arginine rich coiled coil
           1 (LOC512106), mRNA
          Length = 3369

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 376 ccatccccgccagcagcgcccgcc 399
           ||||||||||||||||| ||||||
Sbjct: 598 ccatccccgccagcagcacccgcc 621
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 298     gcgcctgcacggagtccgccgccg 321
               |||||||||||| |||||||||||
Sbjct: 2619106 gcgcctgcacggtgtccgccgccg 2619083
to top
>gb|AE009050.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 76 of
            256 of the complete sequence
          Length = 12647

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  caccagcggcagcgcctgca 306
            ||||||||||||||||||||
Sbjct: 4864 caccagcggcagcgcctgca 4845
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 391      gcgcccgccccctcccctcc 410
                ||||||||||||||||||||
Sbjct: 22917352 gcgcccgccccctcccctcc 22917371



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 391      gcgcccgccccctcccctcc 410
                ||||||||||||||||||||
Sbjct: 11507541 gcgcccgccccctcccctcc 11507522



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 393     gcccgccccctcccctcccc 412
               ||||||||||||||||||||
Sbjct: 9452263 gcccgccccctcccctcccc 9452282
to top
>gb|AC126440.3| Mus musculus BAC clone RP23-413M14 from chromosome 14, complete sequence
          Length = 207346

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 385    ccagcagcgcccgccccctcccct 408
              |||||||||||| |||||||||||
Sbjct: 172060 ccagcagcgccccccccctcccct 172083
to top
>gb|AC091623.2| Sus scrofa clone RP44-183E24, complete sequence
          Length = 200062

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   gcccgccccctcccctcccc 412
             ||||||||||||||||||||
Sbjct: 95151 gcccgccccctcccctcccc 95132
to top
>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete
              sequence
          Length = 184783

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    gcgcccgccccctcccctcc 410
              ||||||||||||||||||||
Sbjct: 119882 gcgcccgccccctcccctcc 119901
to top
>emb|AL391602.6| Human DNA sequence from clone RP11-231F10 on chromosome 20 Contains
             part of a novel gene, complete sequence
          Length = 14368

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   gcagcgcccgccccctcccc 407
             ||||||||||||||||||||
Sbjct: 10919 gcagcgcccgccccctcccc 10938
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 388     gcagcgcccgccccctcccc 407
               ||||||||||||||||||||
Sbjct: 1473840 gcagcgcccgccccctcccc 1473821
to top
>emb|Y07661.1|HSUSF2 H.sapiens USF2 gene
          Length = 14440

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 392  cgcccgccccctcccctccc 411
            ||||||||||||||||||||
Sbjct: 3608 cgcccgccccctcccctccc 3627
to top
>emb|X90825.1|HSUSF2AB2 H.sapiens mRNA for USF2a & USF2b, clone P2
          Length = 1458

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 392 cgcccgccccctcccctccc 411
           ||||||||||||||||||||
Sbjct: 30  cgcccgccccctcccctccc 49
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 298    gcgcctgcacggagtccgccgccg 321
              |||||||||||| |||||||||||
Sbjct: 799100 gcgcctgcacggtgtccgccgccg 799077
to top
>ref|NM_207291.1| Homo sapiens upstream transcription factor 2, c-fos interacting
           (USF2), transcript variant 2, mRNA
          Length = 1531

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 392 cgcccgccccctcccctccc 411
           ||||||||||||||||||||
Sbjct: 30  cgcccgccccctcccctccc 49
to top
>ref|NM_003367.2| Homo sapiens upstream transcription factor 2, c-fos interacting
           (USF2), transcript variant 1, mRNA
          Length = 1732

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 392 cgcccgccccctcccctccc 411
           ||||||||||||||||||||
Sbjct: 30  cgcccgccccctcccctccc 49
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     atccccgccagcagcgcccg 397
               ||||||||||||||||||||
Sbjct: 2580399 atccccgccagcagcgcccg 2580380
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 376     ccatccccgccagcagcgcc 395
               ||||||||||||||||||||
Sbjct: 5205795 ccatccccgccagcagcgcc 5205814
to top
>emb|CR612281.1| full-length cDNA clone CS0DK010YE20 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1507

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 392 cgcccgccccctcccctccc 411
           ||||||||||||||||||||
Sbjct: 139 cgcccgccccctcccctccc 158
to top
>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold
          Length = 489372

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    cccgccccctcccctccccg 413
              ||||||||||||||||||||
Sbjct: 119000 cccgccccctcccctccccg 118981
to top
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   gcgcccgccccctcccctcc 410
             ||||||||||||||||||||
Sbjct: 58113 gcgcccgccccctcccctcc 58094
to top
>gb|AC025824.37| Homo sapiens chromosome 15 clone RP11-430M3, complete sequence
          Length = 177917

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   aacagcaccacgccccagaa 280
             ||||||||||||||||||||
Sbjct: 61340 aacagcaccacgccccagaa 61359
to top
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    caccagcggcagcgcctgca 306
              ||||||||||||||||||||
Sbjct: 833479 caccagcggcagcgcctgca 833460
to top
>gb|AC091580.11| Homo sapiens chromosome 15, clone RP11-304N14, complete sequence
          Length = 108369

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    aacagcaccacgccccagaa 280
              ||||||||||||||||||||
Sbjct: 106469 aacagcaccacgccccagaa 106488
to top
>gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, complete sequence
          Length = 187350

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    tgaagagcatgctccccagc 221
              ||||||||||||||||||||
Sbjct: 163830 tgaagagcatgctccccagc 163849
to top
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    gcccgccccctcccctcccc 412
              ||||||||||||||||||||
Sbjct: 149663 gcccgccccctcccctcccc 149682
to top
>dbj|AK158906.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched
           library, clone:K530003G17 product:upstream transcription
           factor 2, full insert sequence
          Length = 1446

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 392 cgcccgccccctcccctccc 411
           ||||||||||||||||||||
Sbjct: 191 cgcccgccccctcccctccc 210
to top
>gb|AC010837.2| Homo sapiens chromosome 18, clone RP11-307E5, complete sequence
          Length = 210074

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   tgaagagcatgctccccagc 221
             ||||||||||||||||||||
Sbjct: 29594 tgaagagcatgctccccagc 29613
to top
>gb|AD000684.1|CH19R30879 Homo sapiens DNA from chromosome 19-cosmid R30879 containing USF2,
             genomic sequence
          Length = 41936

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 392   cgcccgccccctcccctccc 411
             ||||||||||||||||||||
Sbjct: 17987 cgcccgccccctcccctccc 18006
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 391      gcgcccgccccctcccctcc 410
                ||||||||||||||||||||
Sbjct: 17021164 gcgcccgccccctcccctcc 17021183
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 391     gcgcccgccccctcccctcc 410
               ||||||||||||||||||||
Sbjct: 4680682 gcgcccgccccctcccctcc 4680663
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 394      cccgccccctcccctccccg 413
                ||||||||||||||||||||
Sbjct: 26683440 cccgccccctcccctccccg 26683459



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 394      cccgccccctcccctccccg 413
                ||||||||||||||||||||
Sbjct: 26645126 cccgccccctcccctccccg 26645145
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 287     caccagcggcagcgcctgca 306
               ||||||||||||||||||||
Sbjct: 3212857 caccagcggcagcgcctgca 3212838
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 391      gcgcccgccccctcccctcc 410
                ||||||||||||||||||||
Sbjct: 22910380 gcgcccgccccctcccctcc 22910399



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 391      gcgcccgccccctcccctcc 410
                ||||||||||||||||||||
Sbjct: 11504304 gcgcccgccccctcccctcc 11504285



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 393     gcccgccccctcccctcccc 412
               ||||||||||||||||||||
Sbjct: 9450384 gcccgccccctcccctcccc 9450403
to top
>dbj|AP000055.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 26/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   tgaagagcatgctccccagc 221
             ||||||||||||||||||||
Sbjct: 69645 tgaagagcatgctccccagc 69664
to top
>gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome 7, complete sequence
          Length = 215193

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 392    cgcccgccccctcccctccc 411
              ||||||||||||||||||||
Sbjct: 111153 cgcccgccccctcccctccc 111172
to top
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete
             sequence
          Length = 135216

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   gcgcccgccccctcccctcc 410
             ||||||||||||||||||||
Sbjct: 61656 gcgcccgccccctcccctcc 61675
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 320     cgcgtacccggccgcctgcccggc 343
               ||||| ||||||||||||||||||
Sbjct: 4277731 cgcgtccccggccgcctgcccggc 4277754
to top
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702C09
          Length = 138203

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   cccgccccctcccctccccg 413
             ||||||||||||||||||||
Sbjct: 94967 cccgccccctcccctccccg 94986



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   cccgccccctcccctccccg 413
             ||||||||||||||||||||
Sbjct: 56653 cccgccccctcccctccccg 56672
to top
>dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0681H07
          Length = 144722

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 391    gcgcccgccccctcccctcc 410
              ||||||||||||||||||||
Sbjct: 133551 gcgcccgccccctcccctcc 133532
to top
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0455F03
          Length = 158201

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    caccagcggcagcgcctgca 306
              ||||||||||||||||||||
Sbjct: 127847 caccagcggcagcgcctgca 127828
to top
>dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0543C11
          Length = 159075

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   cccgccccctcccctccccg 413
             ||||||||||||||||||||
Sbjct: 60819 cccgccccctcccctccccg 60838



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   cccgccccctcccctccccg 413
             ||||||||||||||||||||
Sbjct: 43494 cccgccccctcccctccccg 43513
to top
>dbj|BS000191.1| Pan troglodytes chromosome 22 clone:PTB-015O01, map 22, complete
              sequences
          Length = 155412

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    tgaagagcatgctccccagc 221
              ||||||||||||||||||||
Sbjct: 117844 tgaagagcatgctccccagc 117863
to top
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0033D24
          Length = 186132

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   cccgccccctcccctccccg 413
             ||||||||||||||||||||
Sbjct: 26782 cccgccccctcccctccccg 26801
to top
>emb|Y08849.1|MKMCHGENE M.kandleri mch gene
          Length = 1500

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  ctcctcgacgacctccggta 253
            ||||||||||||||||||||
Sbjct: 1003 ctcctcgacgacctccggta 984
to top
>gb|U12282.1|MMUSF2S1 Mus musculus transcription factor USF2 (USF2) gene, exons 1-7
          Length = 4352

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 392  cgcccgccccctcccctccc 411
            ||||||||||||||||||||
Sbjct: 1163 cgcccgccccctcccctccc 1182
to top
>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,
             aminoalcoholphosphotransferase, putative growth-regulating
             factor 1, putative GAG-POL precursor, putative GAG-POL
             precursor, putative RIRE2 orf3, putative anthocyanin
             regulatory C1, putative protein T30F21.6, putative copia
             polyprotein, putative copia polyprotein, putative protein
             NP_196765.1, and gb protein genes, complete cds; and
             putative zinc finger protein gene, partial cds
          Length = 144159

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   cccctcccctccccgtcggc 418
             ||||||||||||||||||||
Sbjct: 21640 cccctcccctccccgtcggc 21659
to top
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1714_H10
          Length = 191580

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   caccagcggcagcgcctgca 306
             ||||||||||||||||||||
Sbjct: 22550 caccagcggcagcgcctgca 22531
to top
>emb|X77602.1|MMUSF217 M.musculus USF2 gene (exons 1-7)
          Length = 4423

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 392  cgcccgccccctcccctccc 411
            ||||||||||||||||||||
Sbjct: 1613 cgcccgccccctcccctccc 1632
to top
>dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, section 64/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    tgaagagcatgctccccagc 221
              ||||||||||||||||||||
Sbjct: 251854 tgaagagcatgctccccagc 251873
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 331     ccgcctgcccggccatgaac 350
               ||||||||||||||||||||
Sbjct: 5262152 ccgcctgcccggccatgaac 5262171
to top
>emb|Z84492.2|HSLUCA11 Human DNA sequence from clone XXcos-11 on chromosome 3 Contains the 3'
             part of the gene for calcium channel, voltage-dependent, L
             type, alpha 2D subunit (KIAA0558) and the first exon of
             the gene for PL6 protein (deleted in Small Cell Lung
             Carcinoma). Contains ESTs, GSSs and a putative CpG island,
             complete sequence
          Length = 27844

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   aggaggccatgagcacggac 185
             ||||||||||||||||||||
Sbjct: 26970 aggaggccatgagcacggac 26951
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 391      gcgcccgccccctcccctcc 410
                ||||||||||||||||||||
Sbjct: 17030204 gcgcccgccccctcccctcc 17030223
to top
>dbj|AP000329.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone:Q92D1, complete sequence
          Length = 10909

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  tgaagagcatgctccccagc 221
            ||||||||||||||||||||
Sbjct: 8035 tgaagagcatgctccccagc 8054
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>dbj|AP000170.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B2344F14-f50E8, segment 6/9, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   tgaagagcatgctccccagc 221
             ||||||||||||||||||||
Sbjct: 61613 tgaagagcatgctccccagc 61632


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,673,805
Number of Sequences: 3902068
Number of extensions: 2673805
Number of successful extensions: 116127
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114571
Number of HSP's gapped (non-prelim): 1556
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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