ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart07b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HEMA_PTV10 (Q70KP1) Hemagglutinin-esterase homolog precursor (EC... 31 1.8
2YOU3_CAEEL (P30639) Hypothetical protein ZK637.3 29 6.8
3FAS_MOUSE (P19096) Fatty acid synthase (EC 2.3.1.85) [Includes: ... 28 8.9

>HEMA_PTV10 (Q70KP1) Hemagglutinin-esterase homolog precursor (EC 3.1.1.53)|
           (HE)
          Length = 430

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 450 GLLKADPSYYXSFMVNETAFSKRYICPHKEAAP 352
           G     PS+Y +F  N TA   RYIC + E  P
Sbjct: 232 GYYYQSPSFYHAFYTNGTAGLHRYICDYLEMKP 264



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>YOU3_CAEEL (P30639) Hypothetical protein ZK637.3|
          Length = 599

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +2

Query: 2   LSICVSI*HKDEQVHNHAMLSSLMIDEMEI 91
           L + VSI  KD +++NH + +S + DE EI
Sbjct: 102 LDVLVSIRDKDTEIYNHTLWTSEIEDEKEI 131



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>FAS_MOUSE (P19096) Fatty acid synthase (EC 2.3.1.85) [Includes:|
            [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38);
            [Acyl-carrier-protein] S-malonyltransferase (EC
            2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC
            2.3.1.41); 3-oxoacyl-[acyl-
          Length = 2504

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +1

Query: 247  VL*ASKFQYCVLSSCKYESSRHFPFASGCIVFSEVWCSLLVRAYVPLGESSLIH 408
            VL +S F + V SS   E +   P     +V++  + SL+VR  +  GE+ LIH
Sbjct: 1619 VLLSSDFLWDVPSSWTLEEAASVP-----VVYTTAYYSLVVRGRIQRGETVLIH 1667


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,704,102
Number of Sequences: 219361
Number of extensions: 1096109
Number of successful extensions: 2179
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2179
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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