ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart07b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF107025.1|AF107025 Triticum aestivum similar to histone H1 m... 400 e-108
2dbj|D87064.1| Triticum aestivum gene for histone H1, complete cd... 381 e-102
3dbj|D87065.1| Triticum aestivum gene for histone H1, complete cd... 281 1e-72
4gb|AF107024.1|AF107024 Triticum aestivum histone H1 WH1B.1 mRNA,... 137 4e-29
5emb|X59872.2|TAHISTH1 T.aestivum L mRNA for histone H1 135 2e-28
6gb|AF107022.1|AF107022 Triticum aestivum histone H1 WH1A.1 mRNA,... 135 2e-28
7gb|AF107027.1|AF107027 Triticum aestivum histone H1 WH1A.4 mRNA,... 113 6e-22
8gb|AF107026.1|AF107026 Triticum aestivum histone H1 WH1A.3 mRNA,... 113 6e-22
9gb|AY587552.1| Hordeum vulgare subsp. vulgare GAMYB-binding prot... 105 1e-19
10gb|AF107023.1|AF107023 Triticum aestivum histone H1 WH1A.2 mRNA,... 101 2e-18
11gb|BT016422.1| Zea mays clone Contig255 mRNA sequence 72 2e-09
12gb|AY103607.1| Zea mays PCO078239 mRNA sequence 66 1e-07
13gb|BT016684.1| Zea mays clone Contig517 mRNA sequence 64 5e-07
14gb|BT018112.1| Zea mays clone EL01N0553G06.c mRNA sequence 58 3e-05
15ref|XM_476900.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
16gb|AY576796.1| Actinoplanes phage phiAsp2, complete genome 56 1e-04
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
18gb|AY204472.1| Myxococcus xanthus clone C1226 adventurous glidin... 56 1e-04
19dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
20dbj|AK106132.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
21dbj|AK102642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
22dbj|AK099050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
23dbj|AK059544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
24gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 54 4e-04
25dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 50 0.007
26gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 50 0.007
27emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 48 0.027
28gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 48 0.027
29dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 48 0.027
30gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 48 0.027
31emb|X57077.1|ZMH1HIS Maize H1 mRNA for H1 histone 48 0.027
32gb|U16726.1|CRU16726 Chlamydomonas reinhardtii histone H1 (ch1),... 48 0.027
33gb|AF461814.1| Zea mays histone H1-like protein (hon102) mRNA, c... 46 0.11
34gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipie... 46 0.11
35gb|BT016467.1| Zea mays clone Contig300 mRNA sequence 46 0.11
36gb|BT018031.1| Zea mays clone EL01N0530C09.c mRNA sequence 46 0.11
37gb|AY993941.1| Microbacterium arborescens strain SE 14 cosmid MA... 46 0.11
38gb|DQ066883.1| Mycobacterium smegmatis strain mc2-155 histone-li... 46 0.11
39ref|NM_214555.1| Strongylocentrotus purpuratus late histone H1-g... 46 0.11
40gb|AY103883.1| Zea mays PCO072547 mRNA sequence 46 0.11
41gb|AF068138.1|AF068138 Mycobacterium smegmatis histone-like prot... 46 0.11
42gb|M16033.1|SUSHISHA1G Sea urchin (S.purpuratus) late histone H1... 46 0.11
43gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 44 0.43
44gb|AY628703.1| Streptomyces ansochromogenes principal sigma fact... 44 0.43
45ref|XM_603394.2| PREDICTED: Bos taurus similar to bromodomain co... 44 0.43
46emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 i... 44 0.43
47emb|Y13228.1|MBS10OPER Mycobacterium bovis BCG DNA for ribosomal... 44 0.43
48emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome... 44 0.43
49emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 44 0.43
50emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 44 0.43
51dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
52dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 44 0.43
53dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
54dbj|AK106545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
55dbj|AK106525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
56dbj|AK105409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
57emb|AJ330315.1|HSA330315 Homo sapiens genomic sequence surroundi... 44 0.43
58gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.43
59gb|AD000005.1|MSGY42 Mycobacterium tuberculosis sequence from cl... 44 0.43
60dbj|AB032557.1| Streptomyces lividans hup2 gene for histone-like... 44 0.43
61gb|AY785296.1| Caenorhabditis remanei H1 histone isoform H1.1 mR... 42 1.7
62gb|AC183919.2| Pan troglodytes BAC clone CH251-691O9 from chromo... 42 1.7
63ref|NM_004227.3| Homo sapiens pleckstrin homology, Sec7 and coil... 42 1.7
64gb|AC009412.6| Homo sapiens BAC clone RP11-425P5 from 7, complet... 42 1.7
65gb|BC028717.1| Homo sapiens pleckstrin homology, Sec7 and coiled... 42 1.7
66ref|XM_754536.1| Ustilago maydis 521 hypothetical protein (UM034... 42 1.7
67ref|XM_853362.1| PREDICTED: Canis familiaris similar to bromodom... 42 1.7
68ref|XM_853324.1| PREDICTED: Canis familiaris similar to bromodom... 42 1.7
69ref|XM_853284.1| PREDICTED: Canis familiaris similar to bromodom... 42 1.7
70ref|XM_537803.2| PREDICTED: Canis familiaris similar to bromodom... 42 1.7
71ref|XM_853206.1| PREDICTED: Canis familiaris similar to bromodom... 42 1.7
72ref|XM_853167.1| PREDICTED: Canis familiaris similar to bromodom... 42 1.7
73ref|XM_853045.1| PREDICTED: Canis familiaris similar to bromodom... 42 1.7
74ref|XM_852961.1| PREDICTED: Canis familiaris similar to bromodom... 42 1.7
75ref|XM_852921.1| PREDICTED: Canis familiaris similar to bromodom... 42 1.7
76emb|X52983.1|SCCSB1 Streptomyces coelicolor hrdB gene for princi... 42 1.7
77emb|AJ005197.1|HSAJ5197 Homo sapiens mRNA for guanine nucleotide... 42 1.7
78emb|AJ308422.1|RFA308422 Rhodococcus fascians pgk gene for polyp... 42 1.7
79emb|AJ223957.1|HSA223957 Homo sapiens mRNA for ARNO3 protein 42 1.7
80gb|AE012161.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.7
81gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 1.7
82gb|AY129335.1| Mycobacteriophage Corndog, complete genome 42 1.7
83gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.7
84gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 42 1.7
85emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.7
86dbj|AK062828.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
87dbj|AB042040.1| Pennahia argentata mRNA for myosin light chain 1... 42 1.7
88gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete ... 40 6.7
89ref|NM_185048.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
90ref|XM_513924.1| PREDICTED: Pan troglodytes LOC457436 (LOC457436... 40 6.7
91ref|NM_003037.1| Homo sapiens signaling lymphocytic activation m... 40 6.7
92gb|AC161181.3| Mus musculus chromosome 3, clone RP23-10I23, comp... 40 6.7
93gb|DQ059383.1| Mycobacterium smegmatis HBHA-like protein gene, c... 40 6.7
94ref|XM_364840.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.7
95gb|AC175831.3| Mus musculus BAC clone RP24-285G1 from chromosome... 40 6.7
96gb|DQ493952.1| Magnaporthe grisea 70-15 clone 41N21 telomere reg... 40 6.7
97gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.7
98ref|XM_654234.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.7
99ref|NM_022466.2| Homo sapiens zinc finger protein, subfamily 1A,... 40 6.7
100gb|AC103649.8| Mus musculus chromosome 3, clone RP24-359A15, com... 40 6.7
101gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.7
102ref|XM_535876.2| PREDICTED: Canis familiaris similar to Coagulat... 40 6.7
103ref|XM_852054.1| PREDICTED: Canis familiaris similar to Coagulat... 40 6.7
104ref|XM_980795.1| PREDICTED: Mus musculus cDNA sequence BC030336,... 40 6.7
105ref|XM_133786.9| PREDICTED: Mus musculus cDNA sequence BC030336,... 40 6.7
106emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 6.7
107gb|AC122214.4| Mus musculus BAC clone RP23-104J10 from chromosom... 40 6.7
108gb|AC122044.3| Mus musculus BAC clone RP24-449D16 from chromosom... 40 6.7
109gb|BC012602.1| Homo sapiens signaling lymphocytic activation mol... 40 6.7
110emb|BX640404.2| Chicken DNA sequence from clone WAG-36O23, compl... 40 6.7
111gb|AC099930.11| Mus musculus chromosome 7, clone RP23-17C12, com... 40 6.7
112gb|AY954299.1| Mycobacterium ulcerans isolate ITM 842 laminin-bi... 40 6.7
113gb|AY954298.1| Mycobacterium ulcerans isolate ITM 94-1328 lamini... 40 6.7
114gb|AY954297.1| Mycobacterium ulcerans isolate ITM 98-912 laminin... 40 6.7
115gb|AY954296.1| Mycobacterium ulcerans isolate ITM 5114 laminin-b... 40 6.7
116gb|AY954295.1| Mycobacterium ulcerans isolate ITM 9537 PNG lamin... 40 6.7
117gb|AY954294.1| Mycobacterium ulcerans isolate ITM 9540 laminin-b... 40 6.7
118gb|AY954292.1| Mycobacterium ulcerans isolate ITM 97-483 laminin... 40 6.7
119gb|BC110349.1| Homo sapiens cDNA clone IMAGE:5212273, containing... 40 6.7
120gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete seq... 40 6.7
121emb|AL121985.13|HSA404F10 Human DNA sequence from clone RP11-404... 40 6.7
122gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, com... 40 6.7
123gb|AC060775.5| Homo sapiens chromosome 8, clone RP11-678D18, com... 40 6.7
124gb|BC067847.1| Homo sapiens signaling lymphocytic activation mol... 40 6.7
125gb|BC022564.1| Homo sapiens zinc finger protein, subfamily 1A, 5... 40 6.7
126emb|CR859262.1| Pongo pygmaeus mRNA; cDNA DKFZp468N105 (from clo... 40 6.7
127emb|BX647958.1|HSM808104 Homo sapiens mRNA; cDNA DKFZp686M0751 (... 40 6.7
128dbj|D26094.1|FVBPOAD2A Flavobacterium sp. plasmid pOAD2 DNA, who... 40 6.7
129gb|AF526299.1| Mycobacterium avium subsp. paratuberculosis hepar... 40 6.7
130dbj|AK122899.1| Homo sapiens cDNA FLJ16565 fis, clone SYNOV40077... 40 6.7
131emb|CR591039.1| full-length cDNA clone CS0DD002YA03 of Neuroblas... 40 6.7
132emb|CR590430.1| full-length cDNA clone CS0DI065YO02 of Placenta ... 40 6.7
133gb|AC079319.19| Homo sapiens 12q BAC RP11-118A3 (Roswell Park Ca... 40 6.7
134gb|DQ400925.1| Sus scrofa signaling lymphocytic activation molec... 40 6.7
135dbj|AK148546.1| Mus musculus adult pancreas islet cells cDNA, RI... 40 6.7
136dbj|AK148518.1| Mus musculus adult pancreas islet cells cDNA, RI... 40 6.7
137dbj|AK164547.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.7
138dbj|AK162324.1| Mus musculus adult male cecum cDNA, RIKEN full-l... 40 6.7
139gb|AC008827.6| Homo sapiens chromosome 5 clone CTD-2136P21, comp... 40 6.7
140gb|AC091920.2| Homo sapiens chromosome 5 clone RP11-254G13, comp... 40 6.7
141gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.7
142gb|AY040554.1| Homo sapiens SLAM mRNA, complete cds 40 6.7
143dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
144gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.7
145gb|AF302038.1|AF302038 Saguinus oedipus signaling lymphocytic ac... 40 6.7
146gb|AF252303.1|AF252303S1 Homo sapiens signaling lymphocytic acti... 40 6.7
147gb|AC008269.4| Homo sapiens BAC clone RP11-95H11 from 2, complet... 40 6.7
148gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genom... 40 6.7
149gb|AF257239.1|AF257239 Saguinus oedipus CDw150 mRNA, complete cds 40 6.7
150dbj|AB055269.1| Macaca fascicularis brain cDNA, clone:QflA-11070 40 6.7
151dbj|AK026626.1| Homo sapiens cDNA: FLJ22973 fis, clone KAT11042 40 6.7
152dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
153gb|AC154822.2| Mus musculus BAC clone RP24-537L18 from 13, compl... 40 6.7
154dbj|AK099211.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
155ref|NM_208033.1| Eremothecium gossypii AAR138Cp (AAR138C), mRNA 40 6.7
156dbj|AK067840.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
157gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.7
158emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.7
159emb|AL807747.10| Mouse DNA sequence from clone RP23-300N21 on ch... 40 6.7
160gb|AC140304.3| Mus musculus BAC clone RP23-386K4 from 15, comple... 40 6.7
161gb|AF008943.1|AF008943 Crithidia fasciculata kinetoplast-associa... 40 6.7
162gb|L41841.1|CREHIH3G Chlamydomonas reinhardtii histone H3, histo... 40 6.7
163gb|U09821.1|MSU09821 Mycobacterium smegmatis sigma factor MysA (... 40 6.7
164gb|U33017.1|HSU33017 Human signaling lymphocytic activation mole... 40 6.7
165emb|AL928658.6| Mouse DNA sequence from clone RP23-238A18 on chr... 40 6.7 
>gb|AF107025.1|AF107025 Triticum aestivum similar to histone H1 mRNA sequence
          Length = 1082

 Score =  400 bits (202), Expect = e-108
 Identities = 417/481 (86%), Gaps = 15/481 (3%)
 Strand = Plus / Minus

                                                                        
Query: 22   cataattaattagataaacaatgcactattttgttctcgacaccgtcacatggaccttgc 81
            ||||||||||||||||||||||||||||||| ||| |||||||| ||||| ||| |||||
Sbjct: 1049 cataattaattagataaacaatgcactattt-gttttcgacaccatcacaaggatcttgc 991

                                                                        
Query: 82   tacgctnnnnnnnncctcatcacatcaggctgctacggtaatatggacgaccggggacaa 141
            ||||||        ||||  || |||| ||||||||||||| | ||| |  ||||||| |
Sbjct: 990  tacgctaaaaaa--cctcgacaaatcaagctgctacggtaaaacggaggctcggggacga 933

                                                                        
Query: 142  accctcgccgccgccgtcttcgt--catccacagatacacctcccagggtacgccggccg 199
            |||||||||||||||||| ||||  || |||||||||||||||| ||||||| | |   |
Sbjct: 932  accctcgccgccgccgtcgtcgtttcacccacagatacacctccaagggtacncggattg 873

                                                                        
Query: 200  agaccagtgcaccacgacccggatataaaa-tttacagtctagaacacagaatcctggac 258
            | ||||| ||||| |||||||||| ||||| |||||||||||||||||| |||| |||||
Sbjct: 872  a-accagagcaccccgacccggatgtaaaaatttacagtctagaacacacaatc-tggac 815

                                                                        
Query: 259  taaca---acacagaacatgggaaaactgctaatggaaactcgtt-gcgggaggacgggc 314
            || ||   |||||||||| |||||||||||||||||||||| ||| || |||||||||  
Sbjct: 814  taccaccgacacagaacaggggaaaactgctaatggaaactggtttgccggaggacggag 755

                                                                        
Query: 315  tctctacttcttggccttcttggcgggggccttcttggcgggcgtggccttcttcaccgg 374
             |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 754  gctctacttcttggccttcttggcgggggtcttcttggcgggcgcggccttcttcaccgg 695

                                                                        
Query: 375  cgccgaccgcttggtgggcggcttcctggcggctggcttcttgggggtagcgggtgccgc 434
            ||||||||||||||||||||||||||||| ||| | |||||||||||| ||||  || ||
Sbjct: 694  cgccgaccgcttggtgggcggcttcctgggggcggccttcttgggggtggcggcggcggc 635

                                                                        
Query: 435  ---cgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
               ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 634  gggcgccttcttccctggcgcgtccttggcggaggtcttggcggccttggcggggcggcc 575

             
Query: 492  c 492
            |
Sbjct: 574  c 574
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>dbj|D87064.1| Triticum aestivum gene for histone H1, complete cds, clone:TH315
          Length = 3025

 Score =  381 bits (192), Expect = e-102
 Identities = 423/495 (85%), Gaps = 24/495 (4%)
 Strand = Plus / Minus

                                                                        
Query: 18   caatcataattaattagataaacaatgcactattttgttctcgacaccg-tcacatggac 76
            ||||||||||||||||||||||||||||||||||| ||| ||||||||  ||||||| | 
Sbjct: 2145 caatcataattaattagataaacaatgcactattt-gttttcgacacccatcacatg-at 2088

                                                                        
Query: 77   cttgctacgctnnnnnnnncctcatcacatcaggctgctacggtaatatggacgaccggg 136
            |||||||||||        ||||  || |||| ||||||||||||||  ||| | | |||
Sbjct: 2087 cttgctacgctaaaaaa--cctcgacaaatcaagctgctacggtaatgcggaggccgggg 2030

                                                                        
Query: 137  gacaaaccctcgccgccgcc---gtcttcgtcatc--------cacagatacacctccca 185
            ||||||||||||||||||||   ||| ||||||||        ||||||||||||||| |
Sbjct: 2029 gacaaaccctcgccgccgccgtcgtcgtcgtcatcgtttcacccacagatacacctccaa 1970

                                                                        
Query: 186  gggtacgccggccgagaccagtgcaccacgacccggatataaaatttacagtctagaaca 245
            |||||||||||     ||||| ||||| |||||||||| |||||||||||||||||||||
Sbjct: 1969 gggtacgccggattgaaccagcgcaccccgacccggatgtaaaatttacagtctagaaca 1910

                                                                        
Query: 246  cagaatcctggactaaca---acacagaacatgggaaaactgctaatggaaactcgttgc 302
            ||||||||||||||| ||   |||||||||| |||||||||||||  ||| ||| |||||
Sbjct: 1909 cagaatcctggactaccaccgacacagaacaggggaaaactgctacgggagacttgttgc 1850

                                                                        
Query: 303  gggaggacggg--ctctctacttcttggccttcttggcgggggccttcttggcgggcgtg 360
            |||||||| |   | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1849 gggaggacagagacgctctacttcttggccttcttggcgggggccttcttggcgggcgtg 1790

                                                                        
Query: 361  gccttcttcaccggcgccgaccgcttggtgggcggcttcctggcggctggcttcttgggg 420
            ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||
Sbjct: 1789 gccttcttcaccggcgccgaccgcttggtgggcggcttcctgggggcggccttcttgggg 1730

                                                                        
Query: 421  g---tagcgggtgccgccgccttcttccctggtgcgtccttggcggaggtcttggcggcc 477
            |   | ||||  || | ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1729 gtgctggcggcggcgggcgccttcttccctggcgcgtccttggcggaggtcttggcggcc 1670

                           
Query: 478  ttggcggggcggccc 492
            |||  ||||||||||
Sbjct: 1669 ttgcgggggcggccc 1655
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>dbj|D87065.1| Triticum aestivum gene for histone H1, complete cds, clone:TH325
          Length = 2541

 Score =  281 bits (142), Expect = 1e-72
 Identities = 195/211 (92%), Gaps = 5/211 (2%)
 Strand = Plus / Minus

                                                                        
Query: 287  aatggaaactcgttgcgggaggacggg--ctctctacttcttggccttcttggcgggggc 344
            |||||||||| |||||||||||||||   | |||||||||||||||||||||||||||||
Sbjct: 1876 aatggaaacttgttgcgggaggacggagacgctctacttcttggccttcttggcgggggc 1817

                                                                        
Query: 345  cttcttggcgggcgtggccttcttcaccggcgccgaccgcttggtgggcggcttcctggc 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1816 cttcttggcgggcgtggccttcttcaccggcgccgaccgcttggtgggcggcttcctggg 1757

                                                                        
Query: 405  ggctggcttcttgggggtagcgggtgccgc---cgccttcttccctggtgcgtccttggc 461
            ||| | |||||||||||| ||||  || ||   ||||||||||||||| |||||||||||
Sbjct: 1756 ggcggccttcttgggggtggcggcggcggcgggcgccttcttccctggcgcgtccttggc 1697

                                           
Query: 462  ggaggtcttggcggccttggcggggcggccc 492
            |||||||||||||||||||||||||||||||
Sbjct: 1696 ggaggtcttggcggccttggcggggcggccc 1666



 Score =  107 bits (54), Expect = 3e-20
 Identities = 85/94 (90%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                        
Query: 168  ccacagatacacctcccagggtacgccggccgagaccagtgcacc-acgacccggatata 226
            |||||||||||||||| ||||||||||||     ||||| ||||| || |||||||||||
Sbjct: 1990 ccacagatacacctccaagggtacgccggaatgaaccagagcacccacaacccggatata 1931

                                              
Query: 227  aaatttacagtctagaacacagaatcctggacta 260
            ||||||||||||||||||||||||||||||||||
Sbjct: 1930 aaatttacagtctagaacacagaatcctggacta 1897



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 123/148 (83%), Gaps = 4/148 (2%)
 Strand = Plus / Minus

                                                                        
Query: 19   aatcataattaattagataaacaatgcactattttgttctcgacaccgtcacatggacct 78
            ||||||||||||||||||||||||||||||| |||||| ||||||||  |||| ||| ||
Sbjct: 2148 aatcataattaattagataaacaatgcacta-tttgttttcgacaccaccacaaggatct 2090

                                                                        
Query: 79   tgctacgctnnnnnnnncctcatcacatcaggctgctacggtaatatggacgaccgggga 138
            |||||||||        ||||  || |||| ||||||||||||||  ||| | | |||||
Sbjct: 2089 tgctacgct--aaaaaacctcgacaaatcaagctgctacggtaatgcggaggccggggga 2032

                                        
Query: 139  caaa-ccctcgccgccgccgtcttcgtc 165
            |||| ||||||||||||||||| |||||
Sbjct: 2031 caaagccctcgccgccgccgtcgtcgtc 2004
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>gb|AF107024.1|AF107024 Triticum aestivum histone H1 WH1B.1 mRNA, complete cds
          Length = 1114

 Score =  137 bits (69), Expect = 4e-29
 Identities = 127/144 (88%), Gaps = 3/144 (2%)
 Strand = Plus / Minus

                                                                       
Query: 342 ggccttcttggcgggcgtggccttcttcaccggcgccgaccgcttggtgggcggcttcct 401
           ||||||||||||||||| |||||||||||||||||  || | ||||||||||||||||||
Sbjct: 787 ggccttcttggcgggcgcggccttcttcaccggcgtggatctcttggtgggcggcttcct 728

                                                                       
Query: 402 ggcggctggcttcttgggggtagcgggtgccgccgccttcttccctggtgcgtccttggc 461
           |||||| ||||||||||| |  || || ||||  || ||||||||||| |||||||||||
Sbjct: 727 ggcggcgggcttcttgggcgccgc-ggcgccg--gcgttcttccctggcgcgtccttggc 671

                                   
Query: 462 ggaggtcttggcggccttggcggg 485
            ||||||||||| |||||||||||
Sbjct: 670 cgaggtcttggcagccttggcggg 647



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 49/55 (89%), Gaps = 3/55 (5%)
 Strand = Plus / Minus

                                                                  
Query: 317 tctacttcttggccttctt---ggcgggggccttcttggcgggcgtggccttctt 368
           |||||||||||||||||||   ||||||||||||||| || |||| |||||||||
Sbjct: 833 tctacttcttggccttcttggcggcgggggccttcttcgccggcgcggccttctt 779



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 342 ggccttcttggcgggcgtggccttcttcaccggcgc 377
           ||||||||||||||  | |||||||||| |||||||
Sbjct: 823 ggccttcttggcggcgggggccttcttcgccggcgc 788
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>emb|X59872.2|TAHISTH1 T.aestivum L mRNA for histone H1
          Length = 1031

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Minus

                                                                       
Query: 316 ctctacttcttggccttcttggcgggggccttcttggcgggcgtggccttcttcaccggc 375
           ||||||||||||||||||||||| | || ||||||||| |||| ||||||||||||||| 
Sbjct: 785 ctctacttcttggccttcttggccgcgggcttcttggccggcgcggccttcttcaccggg 726

                                                                       
Query: 376 gccgaccgcttggtgggcggcttcctggcggctggcttcttgggggtagcgggtgccgcc 435
           | || |||||||||||||||||||| |||||| |||||||| ||||| ||||  |||| |
Sbjct: 725 gtcgcccgcttggtgggcggcttccgggcggcgggcttcttcggggtcgcggcggccggc 666

                   
Query: 436 gccttctt 443
           ||||||||
Sbjct: 665 gccttctt 658
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>gb|AF107022.1|AF107022 Triticum aestivum histone H1 WH1A.1 mRNA, complete cds
          Length = 1050

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Minus

                                                                       
Query: 316 ctctacttcttggccttcttggcgggggccttcttggcgggcgtggccttcttcaccggc 375
           ||||||||||||||||||||||| | || ||||||||| |||| ||||||||||||||| 
Sbjct: 759 ctctacttcttggccttcttggccgcgggcttcttggccggcgcggccttcttcaccggg 700

                                                                       
Query: 376 gccgaccgcttggtgggcggcttcctggcggctggcttcttgggggtagcgggtgccgcc 435
           | || |||||||||||||||||||| |||||| |||||||| ||||| ||||  |||| |
Sbjct: 699 gtcgcccgcttggtgggcggcttccgggcggcgggcttcttcggggtcgcggcggccggc 640

                   
Query: 436 gccttctt 443
           ||||||||
Sbjct: 639 gccttctt 632
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>gb|AF107027.1|AF107027 Triticum aestivum histone H1 WH1A.4 mRNA, complete cds
          Length = 975

 Score =  113 bits (57), Expect = 6e-22
 Identities = 113/131 (86%), Gaps = 3/131 (2%)
 Strand = Plus / Minus

                                                                       
Query: 316 ctctacttcttggccttcttggcgggggccttcttggcgggcgtggccttcttcaccggc 375
           ||||||||||||||||||||||| | || |||||||||||| |  |||||||||||||||
Sbjct: 745 ctctacttcttggccttcttggccgcgggcttcttggcgggggccgccttcttcaccggc 686

                                                                       
Query: 376 gccgaccgcttggtgggcggcttcc---tggcggctggcttcttgggggtagcgggtgcc 432
           | ||  |||||||||||||||||||    |||||| |||||||||||||| ||||  |||
Sbjct: 685 gtcgcgcgcttggtgggcggcttccgggcggcggcgggcttcttgggggtcgcggcggcc 626

                      
Query: 433 gccgccttctt 443
           | |||||||||
Sbjct: 625 ggcgccttctt 615
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>gb|AF107026.1|AF107026 Triticum aestivum histone H1 WH1A.3 mRNA, partial cds
          Length = 952

 Score =  113 bits (57), Expect = 6e-22
 Identities = 113/131 (86%), Gaps = 3/131 (2%)
 Strand = Plus / Minus

                                                                       
Query: 316 ctctacttcttggccttcttggcgggggccttcttggcgggcgtggccttcttcaccggc 375
           ||||||||||||||||||||||| | || |||||||||||| |  |||||||||||||||
Sbjct: 687 ctctacttcttggccttcttggccgcgggcttcttggcgggggccgccttcttcaccggc 628

                                                                       
Query: 376 gccgaccgcttggtgggcggcttcc---tggcggctggcttcttgggggtagcgggtgcc 432
           | ||  |||||||||||||||||||    |||||| |||||||||||||| ||||  |||
Sbjct: 627 gtcgcgcgcttggtgggcggcttccgggcggcggcgggcttcttgggggtcgcggcggcc 568

                      
Query: 433 gccgccttctt 443
           | |||||||||
Sbjct: 567 ggcgccttctt 557
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>gb|AY587552.1| Hordeum vulgare subsp. vulgare GAMYB-binding protein mRNA, complete
           cds
          Length = 2275

 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/128 (85%), Gaps = 2/128 (1%)
 Strand = Plus / Minus

                                                                       
Query: 316 ctctacttcttggccttcttggcgggggccttcttggcgggcgtggccttcttcaccggc 375
           |||||||||||||||||||| || | || ||||||||| ||||  |||||||||||||| 
Sbjct: 296 ctctacttcttggccttcttcgccgcgggcttcttggccggcgcagccttcttcaccggg 237

                                                                       
Query: 376 gccgaccgcttggtgggcggcttcctggcggctggcttcttgggggtagcgggtgccgcc 435
           | || |||||||||||||| ||||||||||   |||||||||||||| ||||  |||| |
Sbjct: 236 gtcgcccgcttggtgggcgccttcctggcg--aggcttcttgggggttgcggcggccggc 179

                   
Query: 436 gccttctt 443
           ||||||||
Sbjct: 178 gccttctt 171
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>gb|AF107023.1|AF107023 Triticum aestivum histone H1 WH1A.2 mRNA, complete cds
          Length = 1019

 Score =  101 bits (51), Expect = 2e-18
 Identities = 93/107 (86%)
 Strand = Plus / Minus

                                                                       
Query: 316 ctctacttcttggccttcttggcgggggccttcttggcgggcgtggccttcttcaccggc 375
           ||||||||||||||||||||||| | || ||||||||| || | ||||||||||||||||
Sbjct: 751 ctctacttcttggccttcttggccgcgggcttcttggccggagcggccttcttcaccggc 692

                                                          
Query: 376 gccgaccgcttggtgggcggcttcctggcggctggcttcttgggggt 422
           | || || ||||||||||||||||| |||  | |||||||| |||||
Sbjct: 691 gtcgccctcttggtgggcggcttccgggcaacaggcttcttcggggt 645
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>gb|BT016422.1| Zea mays clone Contig255 mRNA sequence
          Length = 1248

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 432 cgccgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
           |||||| |||||||| || | ||||||||| || ||||||||||||||||||||||||||
Sbjct: 776 cgccgctttcttcccgggcgtgtccttggctgacgtcttggcggccttggcggggcggcc 717
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>gb|AY103607.1| Zea mays PCO078239 mRNA sequence
          Length = 1228

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 435 cgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
           ||||||||||||||| | ||||||||| || ||||| || |||||||||||||||||
Sbjct: 756 cgccttcttccctggcgtgtccttggccgacgtcttcgccgccttggcggggcggcc 700



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 327 ggccttcttggcgggggccttcttggcgg 355
           |||||||||||| ||||||||||| ||||
Sbjct: 810 ggccttcttggcaggggccttcttcgcgg 782
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>gb|BT016684.1| Zea mays clone Contig517 mRNA sequence
          Length = 1070

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 436 gccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
           |||||||||||||| | ||||||||| || ||||| || |||||||||||||||||
Sbjct: 752 gccttcttccctggcgtgtccttggccgacgtcttcgccgccttggcggggcggcc 697



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           |||||||||||| |||||||||||
Sbjct: 768 ggccttcttggcaggggccttctt 745
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>gb|BT018112.1| Zea mays clone EL01N0553G06.c mRNA sequence
          Length = 1005

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                    
Query: 435 cgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
           ||||||||| ||||| | | ||||||| || |||||||| |||||||||||||||||
Sbjct: 728 cgccttctttcctggcgtggccttggccgacgtcttggccgccttggcggggcggcc 672
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>ref|XM_476900.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1174

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 432 cgccgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
           ||||||||||||  | || | ||||||||| ||||||||||||| |||||| ||||||||
Sbjct: 842 cgccgccttcttggcaggcgagtccttggcagaggtcttggcggacttggcagggcggcc 783
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>gb|AY576796.1| Actinoplanes phage phiAsp2, complete genome
          Length = 58638

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 326   tggccttcttggcgggggccttcttggc 353
             ||||||||||||||||||||||||||||
Sbjct: 14524 tggccttcttggcgggggccttcttggc 14497
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 432     cgccgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
               ||||||||||||  | || | ||||||||| ||||||||||||| |||||| ||||||||
Sbjct: 4516576 cgccgccttcttggcaggcgagtccttggcagaggtcttggcggacttggcagggcggcc 4516517
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>gb|AY204472.1| Myxococcus xanthus clone C1226 adventurous gliding motility protein
            C, YgbF-like protein, topoisomerase, TolQ-like protein,
            TolR-like protein, hypothetical proteins, GidA-like
            protein (gidA), adventurous gliding motility protein U
            (aglU), kinesin-related protein, integrase/recombinase,
            ion transport protein, HslV-like protein, HslU-like
            protein, and N-acetylornithine aminotransferase-like
            protein genes, complete cds; and hypothetical protein
            gene, partial cds
          Length = 25315

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 327  ggccttcttggcgggggccttcttggcgggcg 358
            |||||||||||||| |||||||||||||||||
Sbjct: 7158 ggccttcttggcggcggccttcttggcgggcg 7127
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>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1046_F10
          Length = 118472

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                         
Query: 432   cgccgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
             ||||||||||||  | || | ||||||||| ||||||||||||| |||||| ||||||||
Sbjct: 95295 cgccgccttcttggcaggcgagtccttggcagaggtcttggcggacttggcagggcggcc 95236
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>dbj|AK106132.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F12, full
           insert sequence
          Length = 1174

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 432 cgccgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
           ||||||||||||  | || | ||||||||| ||||||||||||| |||||| ||||||||
Sbjct: 842 cgccgccttcttggcaggcgagtccttggcagaggtcttggcggacttggcagggcggcc 783
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>dbj|AK102642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100F04, full
           insert sequence
          Length = 1175

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 432 cgccgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
           ||||||||||||  | || | ||||||||| ||||||||||||| |||||| ||||||||
Sbjct: 843 cgccgccttcttggcaggcgagtccttggcagaggtcttggcggacttggcagggcggcc 784
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>dbj|AK099050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148D20, full
           insert sequence
          Length = 1175

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 432 cgccgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
           ||||||||||||  | || | ||||||||| ||||||||||||| |||||| ||||||||
Sbjct: 843 cgccgccttcttggcaggcgagtccttggcagaggtcttggcggacttggcagggcggcc 784
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>dbj|AK059544.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F03, full
           insert sequence
          Length = 1177

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 432 cgccgccttcttccctggtgcgtccttggcggaggtcttggcggccttggcggggcggcc 491
           ||||||||||||  | || | ||||||||| ||||||||||||| |||||| ||||||||
Sbjct: 845 cgccgccttcttggcaggcgagtccttggcagaggtcttggcggacttggcagggcggcc 786
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                          
Query: 327     ggccttcttggcgggggccttcttggc 353
               |||||||||||||||||||||||||||
Sbjct: 3443532 ggccttcttggcgggggccttcttggc 3443506
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 327     ggccttcttggcgggggccttcttggcgg 355
               |||||||||||| ||||||||||||||||
Sbjct: 3976677 ggccttcttggccggggccttcttggcgg 3976649



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 328     gccttcttggcgggggccttcttggcggg 356
               ||||||||||| | |||||||||||||||
Sbjct: 3976721 gccttcttggccgcggccttcttggcggg 3976693



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 327     ggccttcttggcgggggccttctt 350
               ||||||||||||||| ||||||||
Sbjct: 3976707 ggccttcttggcgggtgccttctt 3976684
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 328    gccttcttggcgggggccttcttggcggg 356
              |||||||| ||||||||||||||||||||
Sbjct: 189353 gccttcttcgcgggggccttcttggcggg 189381



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 328     gccttcttggcgggggccttcttggcgg 355
               |||||||||||||| |||||||||||||
Sbjct: 3364642 gccttcttggcgggcgccttcttggcgg 3364669



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 327    ggccttcttggcgggggccttcttggcgggcg 358
              ||||||||||||||| || |||||||||||||
Sbjct: 189367 ggccttcttggcgggtgctttcttggcgggcg 189398



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 327     ggccttcttggcgggggccttcttggc 353
               |||||||||||||| ||||||||||||
Sbjct: 3364596 ggccttcttggcggcggccttcttggc 3364622



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 328    gccttcttggcgggggccttcttggcgggcg 358
              ||||||||||||| || ||||||||||||||
Sbjct: 898313 gccttcttggcggcggtcttcttggcgggcg 898343



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 328     gccttcttggcgggggccttcttggc 353
               |||||||||||||| |||||||||||
Sbjct: 4641457 gccttcttggcgggtgccttcttggc 4641432



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 328    gccttcttggcgggggccttcttggc 353
              |||||||||||||| |||||||||||
Sbjct: 898268 gccttcttggcgggcgccttcttggc 898293



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 329     ccttcttggcgggggccttcttggcggg 356
               |||||||||| || ||||||||||||||
Sbjct: 4429070 ccttcttggccggcgccttcttggcggg 4429043



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 328     gccttcttggcgggggcctt 347
               ||||||||||||||||||||
Sbjct: 4429056 gccttcttggcgggggcctt 4429037



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 328     gccttcttggcgggggccttcttggcgg 355
               |||||||| || ||||||||||||||||
Sbjct: 3364582 gccttcttcgccggggccttcttggcgg 3364609
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>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 328    gccttcttggcgggggccttcttggcgg 355
              ||||||||||| ||||||||||||||||
Sbjct: 290210 gccttcttggccggggccttcttggcgg 290237
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 330     cttcttggcgggggccttcttggc 353
               ||||||||||||||||||||||||
Sbjct: 2718525 cttcttggcgggggccttcttggc 2718548



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 320     acttcttggccttcttggcgg 340
               |||||||||||||||||||||
Sbjct: 2718368 acttcttggccttcttggcgg 2718388



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 391     ggcggcttcctggcggctggcttc 414
               |||| |||||||||||||||||||
Sbjct: 1468170 ggcgccttcctggcggctggcttc 1468147
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 330     cttcttggcgggggccttcttggc 353
               ||||||||||||||||||||||||
Sbjct: 3289700 cttcttggcgggggccttcttggc 3289723



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 330     cttcttggcgggggccttcttgg 352
               |||||||||||||||||||||||
Sbjct: 5791191 cttcttggcgggggccttcttgg 5791169
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 327     ggccttcttggcgggggccttctt 350
               ||||||||||||||||||||||||
Sbjct: 2693695 ggccttcttggcgggggccttctt 2693718
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>emb|X57077.1|ZMH1HIS Maize H1 mRNA for H1 histone
          Length = 1075

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 436 gccttcttccctggtgcgtccttggcggaggtcttggcggccttggcg 483
           |||||||||||||| | ||||||||| || ||||| || |||||||||
Sbjct: 681 gccttcttccctggcgtgtccttggccgacgtcttcgccgccttggcg 634



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           |||||||||||| |||||||||||
Sbjct: 697 ggccttcttggcaggggccttctt 674
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>gb|U16726.1|CRU16726 Chlamydomonas reinhardtii histone H1 (ch1), histone H2A (ch2a-IV),
            and histone H2B (ch2b-IV) genes, complete cds
          Length = 4502

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 327  ggccttcttggcgggggccttcttggcgggcgtggc 362
            ||||||||||| ||||| ||||||||||||| ||||
Sbjct: 1238 ggccttcttggtgggggtcttcttggcgggcttggc 1203



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  cttcttggccttcttggcgg 340
            ||||||||||||||||||||
Sbjct: 3867 cttcttggccttcttggcgg 3848
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>gb|AF461814.1| Zea mays histone H1-like protein (hon102) mRNA, complete cds
          Length = 991

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 455 ccttggcggaggtcttggcggccttgg 481
           |||||||||||||||||||| ||||||
Sbjct: 634 ccttggcggaggtcttggcgaccttgg 608
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>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940117D9, complete sequence
          Length = 143368

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 328   gccttcttggcgggggccttcttggcgggcg 358
             ||||||||||||| || ||||||||||||||
Sbjct: 44765 gccttcttggcggcgggcttcttggcgggcg 44735



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 330   cttcttggcgggggccttcttggcgggc 357
             |||||||||||| |||||||| ||||||
Sbjct: 44748 cttcttggcgggcgccttcttcgcgggc 44721
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>gb|BT016467.1| Zea mays clone Contig300 mRNA sequence
          Length = 1100

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 455 ccttggcggaggtcttggcggccttgg 481
           |||||||||||||||||||| ||||||
Sbjct: 672 ccttggcggaggtcttggcgaccttgg 646
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>gb|BT018031.1| Zea mays clone EL01N0530C09.c mRNA sequence
          Length = 1299

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 455 ccttggcggaggtcttggcggccttgg 481
           |||||||||||||||||||| ||||||
Sbjct: 866 ccttggcggaggtcttggcgaccttgg 840
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>gb|AY993941.1| Microbacterium arborescens strain SE 14 cosmid MAS10D5, complete
             sequence
          Length = 33203

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 328   gccttcttggcgggggccttctt 350
             |||||||||||||||||||||||
Sbjct: 22189 gccttcttggcgggggccttctt 22211



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 40/46 (86%), Gaps = 3/46 (6%)
 Strand = Plus / Plus

                                                           
Query: 330   cttcttggcgggggccttcttggcgggcgtggccttcttcaccggc 375
             ||||||||| || ||||||||||||||   |||||||||| |||||
Sbjct: 22176 cttcttggccggagccttcttggcggg---ggccttcttcgccggc 22218
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>gb|DQ066883.1| Mycobacterium smegmatis strain mc2-155 histone-like protein (hlp)
           gene, complete cds
          Length = 647

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 329 ccttcttggcgggggccttcttggcgg 355
           |||||||||| ||||||||||||||||
Sbjct: 629 ccttcttggccggggccttcttggcgg 603



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 327 ggccttcttggcgggggccttcttggc 353
           |||||||||||||| ||||||||||||
Sbjct: 616 ggccttcttggcggcggccttcttggc 590



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 327 ggccttcttggcgggggccttcttggcgg 355
           |||||||||||| || |||||||||||||
Sbjct: 382 ggccttcttggccggtgccttcttggcgg 354



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           |||||||||||| |||||||||||
Sbjct: 439 ggccttcttggccggggccttctt 416



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 330 cttcttggcgggggccttcttggc 353
           ||||||||||| ||||||||||||
Sbjct: 394 cttcttggcggcggccttcttggc 371
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>ref|NM_214555.1| Strongylocentrotus purpuratus late histone H1-gamma (LOC373350),
           mRNA
          Length = 654

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 321 cttcttggccttcttggcgggggccttcttg 351
           |||||||||||||||||||| || |||||||
Sbjct: 477 cttcttggccttcttggcggcgggcttcttg 447
to top
>gb|AY103883.1| Zea mays PCO072547 mRNA sequence
          Length = 1156

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 455 ccttggcggaggtcttggcggccttgg 481
           |||||||||||||||||||| ||||||
Sbjct: 680 ccttggcggaggtcttggcgaccttgg 654
to top
>gb|AF068138.1|AF068138 Mycobacterium smegmatis histone-like protein (hlp) gene, complete
           cds
          Length = 900

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 329 ccttcttggcgggggccttcttggcgg 355
           |||||||||| ||||||||||||||||
Sbjct: 824 ccttcttggccggggccttcttggcgg 798



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 327 ggccttcttggcgggggccttcttggc 353
           |||||||||||||| ||||||||||||
Sbjct: 811 ggccttcttggcggcggccttcttggc 785



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 327 ggccttcttggcgggggccttcttggcgg 355
           |||||||||||| || |||||||||||||
Sbjct: 577 ggccttcttggccggtgccttcttggcgg 549



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           |||||||||||| |||||||||||
Sbjct: 634 ggccttcttggccggggccttctt 611



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 330 cttcttggcgggggccttcttggc 353
           ||||||||||| ||||||||||||
Sbjct: 589 cttcttggcggcggccttcttggc 566
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>gb|M16033.1|SUSHISHA1G Sea urchin (S.purpuratus) late histone H1-gamma gene, complete cds
          Length = 1182

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 321 cttcttggccttcttggcgggggccttcttg 351
           |||||||||||||||||||| || |||||||
Sbjct: 917 cttcttggccttcttggcggcgggcttcttg 887
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 333    cttggcgggggccttcttggcgggcg 358
              ||||||||| ||||||||||||||||
Sbjct: 806432 cttggcgggcgccttcttggcgggcg 806407



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 335    tggcgggggccttcttggcgggcg 358
              ||||||| ||||||||||||||||
Sbjct: 806373 tggcgggtgccttcttggcgggcg 806350
to top
>gb|AY628703.1| Streptomyces ansochromogenes principal sigma factor gene, complete
           cds
          Length = 2120

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 330 cttcttggcgggggccttcttggcgg 355
           ||||||||||| ||||||||||||||
Sbjct: 841 cttcttggcggcggccttcttggcgg 816
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>ref|XM_603394.2| PREDICTED: Bos taurus similar to bromodomain containing protein 3
            (LOC525051), mRNA
          Length = 2994

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 325  ttggccttcttggcgggggccttctt 350
            ||||||||||||||||| ||||||||
Sbjct: 1610 ttggccttcttggcgggcgccttctt 1585
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>emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 in linkage group 8,
             complete sequence
          Length = 130762

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 25    aattaattagataaacaatgcactat 50
             ||||||||||| ||||||||||||||
Sbjct: 43884 aattaattagaaaaacaatgcactat 43909
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>emb|Y13228.1|MBS10OPER Mycobacterium bovis BCG DNA for ribosomal S10 operon
          Length = 5962

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 333  cttggcgggggccttcttggcgggcg 358
            ||||||||| ||||||||||||||||
Sbjct: 4025 cttggcgggcgccttcttggcgggcg 4000



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 335  tggcgggggccttcttggcgggcg 358
            ||||||| ||||||||||||||||
Sbjct: 3966 tggcgggtgccttcttggcgggcg 3943
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>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 333    cttggcgggggccttcttggcgggcg 358
              ||||||||| ||||||||||||||||
Sbjct: 119970 cttggcgggcgccttcttggcgggcg 119945



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 335    tggcgggggccttcttggcgggcg 358
              ||||||| ||||||||||||||||
Sbjct: 119911 tggcgggtgccttcttggcgggcg 119888
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>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14
          Length = 320050

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 333    cttggcgggggccttcttggcgggcg 358
              ||||||||| ||||||||||||||||
Sbjct: 139065 cttggcgggcgccttcttggcgggcg 139040



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 335    tggcgggggccttcttggcgggcg 358
              ||||||| ||||||||||||||||
Sbjct: 139006 tggcgggtgccttcttggcgggcg 138983
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 330   cttcttggcgggggccttcttggcgg 355
             ||||||||| ||||||||||||||||
Sbjct: 74301 cttcttggccggggccttcttggcgg 74276



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 326   tggccttcttggcgggggccttcttg 351
             ||||||||||||||| ||||||||||
Sbjct: 74083 tggccttcttggcggcggccttcttg 74058



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 328   gccttcttggcgggggccttcttggcgg 355
             |||||||| ||||| |||||||||||||
Sbjct: 74273 gccttcttcgcgggagccttcttggcgg 74246
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 144      cctcgccgccgccgtcttcgtc 165
                ||||||||||||||||||||||
Sbjct: 20292474 cctcgccgccgccgtcttcgtc 20292495
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 328    gccttcttggcgggggccttcttggcgggcgtggcctt 365
              ||||||||||| | ||||||||| |||||| |||||||
Sbjct: 883368 gccttcttggccgcggccttcttcgcgggcttggcctt 883405



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 365     tcttcaccggcgccgaccgc 384
               ||||||||||||||||||||
Sbjct: 2924610 tcttcaccggcgccgaccgc 2924629



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    tcttcaccggcgccgaccgc 384
              ||||||||||||||||||||
Sbjct: 274435 tcttcaccggcgccgaccgc 274416
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>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1439_F07
          Length = 153743

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 144   cctcgccgccgccgtcttcgtc 165
             ||||||||||||||||||||||
Sbjct: 71601 cctcgccgccgccgtcttcgtc 71622
to top
>dbj|AK106545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-F03, full
            insert sequence
          Length = 1756

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 144  cctcgccgccgccgtcttcgtc 165
            ||||||||||||||||||||||
Sbjct: 1155 cctcgccgccgccgtcttcgtc 1134
to top
>dbj|AK106525.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D11, full
            insert sequence
          Length = 1422

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 144  cctcgccgccgccgtcttcgtc 165
            ||||||||||||||||||||||
Sbjct: 1157 cctcgccgccgccgtcttcgtc 1136
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>dbj|AK105409.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F08, full
           insert sequence
          Length = 1475

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 144 cctcgccgccgccgtcttcgtc 165
           ||||||||||||||||||||||
Sbjct: 915 cctcgccgccgccgtcttcgtc 894
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>emb|AJ330315.1|HSA330315 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ6P-G4RS
          Length = 749

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 48/56 (85%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                   
Query: 327 ggccttcttggcgggg---gccttcttggcgggcgtggccttcttcaccggcgccg 379
           |||||||||||| |||   |||||||| ||||||| |||||||||  |||||||||
Sbjct: 416 ggccttcttggccggggctgccttcttcgcgggcgcggccttcttggccggcgccg 361
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 328     gccttcttggcgggggccttcttggcgggcgtggccttcttc 369
               |||||||||||||  |||||||| || |||| ||||||||||
Sbjct: 1303773 gccttcttggcggcagccttcttcgccggcgcggccttcttc 1303732
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>gb|AD000005.1|MSGY42 Mycobacterium tuberculosis sequence from clone y42
          Length = 36526

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 333   cttggcgggggccttcttggcgggcg 358
             ||||||||| ||||||||||||||||
Sbjct: 15962 cttggcgggcgccttcttggcgggcg 15987



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 335   tggcgggggccttcttggcgggcg 358
             ||||||| ||||||||||||||||
Sbjct: 16021 tggcgggtgccttcttggcgggcg 16044
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>dbj|AB032557.1| Streptomyces lividans hup2 gene for histone-like protein, complete
           cds
          Length = 970

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 330 cttcttggcgggggccttcttggcgg 355
           ||||||||| ||||||||||||||||
Sbjct: 877 cttcttggccggggccttcttggcgg 852



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 326 tggccttcttggcgggggccttcttg 351
           ||||||||||||||| ||||||||||
Sbjct: 659 tggccttcttggcggcggccttcttg 634



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 328 gccttcttggcgggggccttcttggcgg 355
           |||||||| ||||| |||||||||||||
Sbjct: 849 gccttcttcgcgggagccttcttggcgg 822
to top
>gb|AY785296.1| Caenorhabditis remanei H1 histone isoform H1.1 mRNA, partial cds
          Length = 587

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 394 ggcttcctggcggctggcttcttgg 418
           |||||| ||||||||||||||||||
Sbjct: 350 ggcttcttggcggctggcttcttgg 326
to top
>gb|AC183919.2| Pan troglodytes BAC clone CH251-691O9 from chromosome 7, complete
              sequence
          Length = 188947

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 142    accctcgccgccgccgtcttc 162
              |||||||||||||||||||||
Sbjct: 169708 accctcgccgccgccgtcttc 169728
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>ref|NM_004227.3| Homo sapiens pleckstrin homology, Sec7 and coiled-coil domains 3
           (PSCD3), mRNA
          Length = 4482

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 accctcgccgccgccgtcttc 162
           |||||||||||||||||||||
Sbjct: 131 accctcgccgccgccgtcttc 111
to top
>gb|AC009412.6| Homo sapiens BAC clone RP11-425P5 from 7, complete sequence
          Length = 212827

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 142   accctcgccgccgccgtcttc 162
             |||||||||||||||||||||
Sbjct: 44651 accctcgccgccgccgtcttc 44671
to top
>gb|BC028717.1| Homo sapiens pleckstrin homology, Sec7 and coiled-coil domains 3,
           mRNA (cDNA clone MGC:33020 IMAGE:4811560), complete cds
          Length = 4562

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 accctcgccgccgccgtcttc 162
           |||||||||||||||||||||
Sbjct: 167 accctcgccgccgccgtcttc 147
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>ref|XM_754536.1| Ustilago maydis 521 hypothetical protein (UM03482.1) partial mRNA
          Length = 1104

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 327 ggccttcttggcgggggccttcttggcgg 355
           ||||||||||| || ||||||||||||||
Sbjct: 51  ggccttcttggtggcggccttcttggcgg 23
to top
>ref|XM_853362.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 12 (LOC480682), mRNA
          Length = 3024

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  tggccttcttggcgggggccttctt 350
            |||||||||||||||| ||||||||
Sbjct: 1779 tggccttcttggcgggagccttctt 1755
to top
>ref|XM_853324.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 11 (LOC480682), mRNA
          Length = 3042

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  tggccttcttggcgggggccttctt 350
            |||||||||||||||| ||||||||
Sbjct: 1779 tggccttcttggcgggagccttctt 1755
to top
>ref|XM_853284.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 10 (LOC480682), mRNA
          Length = 3030

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  tggccttcttggcgggggccttctt 350
            |||||||||||||||| ||||||||
Sbjct: 1740 tggccttcttggcgggagccttctt 1716
to top
>ref|XM_537803.2| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 1 (LOC480682), mRNA
          Length = 3030

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  tggccttcttggcgggggccttctt 350
            |||||||||||||||| ||||||||
Sbjct: 1740 tggccttcttggcgggagccttctt 1716
to top
>ref|XM_853206.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 9 (LOC480682), mRNA
          Length = 3039

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  tggccttcttggcgggggccttctt 350
            |||||||||||||||| ||||||||
Sbjct: 1740 tggccttcttggcgggagccttctt 1716
to top
>ref|XM_853167.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 8 (LOC480682), mRNA
          Length = 3051

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  tggccttcttggcgggggccttctt 350
            |||||||||||||||| ||||||||
Sbjct: 1794 tggccttcttggcgggagccttctt 1770
to top
>ref|XM_853045.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 6 (LOC480682), mRNA
          Length = 2985

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  tggccttcttggcgggggccttctt 350
            |||||||||||||||| ||||||||
Sbjct: 1743 tggccttcttggcgggagccttctt 1719
to top
>ref|XM_852961.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 4 (LOC480682), mRNA
          Length = 3072

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  tggccttcttggcgggggccttctt 350
            |||||||||||||||| ||||||||
Sbjct: 1782 tggccttcttggcgggagccttctt 1758
to top
>ref|XM_852921.1| PREDICTED: Canis familiaris similar to bromodomain containing 3,
            transcript variant 3 (LOC480682), mRNA
          Length = 3021

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 326  tggccttcttggcgggggccttctt 350
            |||||||||||||||| ||||||||
Sbjct: 1779 tggccttcttggcgggagccttctt 1755
to top
>emb|X52983.1|SCCSB1 Streptomyces coelicolor hrdB gene for principal sigma factor
          Length = 2044

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 330 cttcttggcgggggccttcttggcgggcg 358
           ||||||||| | |||||||||||||||||
Sbjct: 747 cttcttggccgcggccttcttggcgggcg 719
to top
>emb|AJ005197.1|HSAJ5197 Homo sapiens mRNA for guanine nucleotide exchange factor GRP1,
           complete cds
          Length = 1340

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 accctcgccgccgccgtcttc 162
           |||||||||||||||||||||
Sbjct: 102 accctcgccgccgccgtcttc 82
to top
>emb|AJ308422.1|RFA308422 Rhodococcus fascians pgk gene for polyphosphate glucokinase and rofA
            gene for RNA polymerase sigma 70
          Length = 2794

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 327  ggccttcttggcgggggccttcttggcgg 355
            |||||||||||| || |||||||||||||
Sbjct: 1224 ggccttcttggccggtgccttcttggcgg 1196
to top
>emb|AJ223957.1|HSA223957 Homo sapiens mRNA for ARNO3 protein
          Length = 1893

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 accctcgccgccgccgtcttc 162
           |||||||||||||||||||||
Sbjct: 52  accctcgccgccgccgtcttc 32
to top
>gb|AE012161.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 69 of
            460 of the complete genome
          Length = 10339

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 326  tggccttcttggcgggggccttctt 350
            ||||||||||||||| |||||||||
Sbjct: 8227 tggccttcttggcggtggccttctt 8251
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 330     cttcttggcgggggccttcttggcgggcgtggc 362
               ||||||||| || ||||||||||||||| ||||
Sbjct: 3275604 cttcttggccggagccttcttggcgggcttggc 3275636
to top
>gb|AY129335.1| Mycobacteriophage Corndog, complete genome
          Length = 69777

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 326   tggccttcttggcgggggccttctt 350
             |||||||||| ||||||||||||||
Sbjct: 52855 tggccttcttagcgggggccttctt 52879
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 326     tggccttcttggcgggggccttctt 350
               ||||||||||||||| |||||||||
Sbjct: 4277360 tggccttcttggcggtggccttctt 4277336
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 331    ttcttggcgggggccttcttggcgg 355
              ||||||||||| |||||||||||||
Sbjct: 258158 ttcttggcgggcgccttcttggcgg 258134
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 328     gccttcttggcgggggccttcttggcgggcgtggccttctt 368
               ||||||||||| | ||||||||| |||| || |||||||||
Sbjct: 3003491 gccttcttggcagcggccttcttcgcggccggggccttctt 3003531
to top
>dbj|AK062828.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-G02, full
           insert sequence
          Length = 514

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 319 tacttcttggccttcttggcgggggcctt 347
           ||||||||| |||||||||||| ||||||
Sbjct: 472 tacttcttgtccttcttggcggcggcctt 444
to top
>dbj|AB042040.1| Pennahia argentata mRNA for myosin light chain 1, complete cds
          Length = 1165

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 327 ggccttcttggcgggggcctt 347
           |||||||||||||||||||||
Sbjct: 115 ggccttcttggcgggggcctt 95
to top
>gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete sequence
          Length = 87688

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   gtcttggcggccttggcggg 485
             ||||||||||||||||||||
Sbjct: 43677 gtcttggcggccttggcggg 43658
to top
>ref|NM_185048.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           ||||||||||||||| ||||||||
Sbjct: 916 ggccttcttggcgggcgccttctt 893
to top
>ref|XM_513924.1| PREDICTED: Pan troglodytes LOC457436 (LOC457436), mRNA
          Length = 691

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 313 cactattttgttctcgacac 294
to top
>ref|NM_003037.1| Homo sapiens signaling lymphocytic activation molecule family
           member 1 (SLAMF1), mRNA
          Length = 1789

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 370 cactattttgttctcgacac 351
to top
>gb|AC161181.3| Mus musculus chromosome 3, clone RP23-10I23, complete sequence
          Length = 218083

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    atcaatcataattaattagataaa 39
             ||||||||||||||||||| ||||
Sbjct: 41132 atcaatcataattaattagttaaa 41155
to top
>gb|DQ059383.1| Mycobacterium smegmatis HBHA-like protein gene, complete cds
          Length = 810

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 40/46 (86%), Gaps = 3/46 (6%)
 Strand = Plus / Minus

                                                         
Query: 326 tggccttcttggcggg---ggccttcttggcgggcgtggccttctt 368
           ||||||||||||| ||   ||||||||||||||| | |||||||||
Sbjct: 646 tggccttcttggccggagcggccttcttggcgggggcggccttctt 601
to top
>ref|XM_364840.1| Magnaporthe grisea 70-15 hypothetical protein (MG09685.4) partial
           mRNA
          Length = 894

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 150 cgccgccgtcttcgtcatccacag 173
           |||||||| |||||||||||||||
Sbjct: 390 cgccgccggcttcgtcatccacag 413
to top
>gb|AC175831.3| Mus musculus BAC clone RP24-285G1 from chromosome 3, complete sequence
          Length = 171981

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    ctacttcttggccttcttgg 337
              ||||||||||||||||||||
Sbjct: 126724 ctacttcttggccttcttgg 126743
to top
>gb|DQ493952.1| Magnaporthe grisea 70-15 clone 41N21 telomere region, partial sequence
          Length = 43132

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 150   cgccgccgtcttcgtcatccacag 173
             |||||||| |||||||||||||||
Sbjct: 12421 cgccgccggcttcgtcatccacag 12398
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 430     gccgccgccttcttccctggtgcg 453
               |||||||||||||||| |||||||
Sbjct: 5300120 gccgccgccttcttccatggtgcg 5300143
to top
>ref|XM_654234.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1722.2), mRNA
          Length = 1521

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  ggcggctggcttcttggggg 421
            ||||||||||||||||||||
Sbjct: 1012 ggcggctggcttcttggggg 1031
to top
>ref|NM_022466.2| Homo sapiens zinc finger protein, subfamily 1A, 5 (ZNFN1A5), mRNA
          Length = 2916

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 cgccgccgccgtcttcgtca 166
           ||||||||||||||||||||
Sbjct: 61  cgccgccgccgtcttcgtca 42
to top
>gb|AC103649.8| Mus musculus chromosome 3, clone RP24-359A15, complete sequence
          Length = 184404

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    atcaatcataattaattagataaa 39
             ||||||||||||||||||| ||||
Sbjct: 64919 atcaatcataattaattagttaaa 64942
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 327      ggccttcttggcgggggccttctt 350
                ||||||||||||||| ||||||||
Sbjct: 33001582 ggccttcttggcgggcgccttctt 33001559



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 144      cctcgccgccgccgtcttcg 163
                ||||||||||||||||||||
Sbjct: 12081097 cctcgccgccgccgtcttcg 12081078
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>ref|XM_535876.2| PREDICTED: Canis familiaris similar to Coagulation factor XIII A
            chain precursor (Coagulation factor XIIIa)
            (Protein-glutamine gamma-glutamyltransferase A chain)
            (Transglutaminase A chain), transcript variant 1
            (LOC478711), mRNA
          Length = 2583

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 314  ctctctacttcttggccttcttgg 337
            |||||| |||||||||||||||||
Sbjct: 1548 ctctcttcttcttggccttcttgg 1525
to top
>ref|XM_852054.1| PREDICTED: Canis familiaris similar to Coagulation factor XIII A
            chain precursor (Coagulation factor XIIIa)
            (Protein-glutamine gamma-glutamyltransferase A chain)
            (Transglutaminase A chain), transcript variant 2
            (LOC478711), mRNA
          Length = 2580

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 314  ctctctacttcttggccttcttgg 337
            |||||| |||||||||||||||||
Sbjct: 1545 ctctcttcttcttggccttcttgg 1522
to top
>ref|XM_980795.1| PREDICTED: Mus musculus cDNA sequence BC030336, transcript variant 2
            (BC030336), mRNA
          Length = 4716

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actaacaacacagaacatgg 276
            ||||||||||||||||||||
Sbjct: 3377 actaacaacacagaacatgg 3358
to top
>ref|XM_133786.9| PREDICTED: Mus musculus cDNA sequence BC030336, transcript variant 1
            (BC030336), mRNA
          Length = 4716

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actaacaacacagaacatgg 276
            ||||||||||||||||||||
Sbjct: 3377 actaacaacacagaacatgg 3358
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    ccttcttggcgggcgtggcc 363
              ||||||||||||||||||||
Sbjct: 808892 ccttcttggcgggcgtggcc 808911
to top
>gb|AC122214.4| Mus musculus BAC clone RP23-104J10 from chromosome 7, complete sequence
          Length = 176054

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   actaacaacacagaacatgg 276
             ||||||||||||||||||||
Sbjct: 42551 actaacaacacagaacatgg 42532
to top
>gb|AC122044.3| Mus musculus BAC clone RP24-449D16 from chromosome 3, complete sequence
          Length = 123678

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   ctacttcttggccttcttgg 337
             ||||||||||||||||||||
Sbjct: 33747 ctacttcttggccttcttgg 33766
to top
>gb|BC012602.1| Homo sapiens signaling lymphocytic activation molecule family
           member 1, mRNA (cDNA clone IMAGE:4296969), complete cds
          Length = 1024

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 590 cactattttgttctcgacac 571
to top
>emb|BX640404.2| Chicken DNA sequence from clone WAG-36O23, complete sequence
          Length = 136520

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   acagaacatgggaaaactgc 285
             ||||||||||||||||||||
Sbjct: 64542 acagaacatgggaaaactgc 64523
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>gb|AC099930.11| Mus musculus chromosome 7, clone RP23-17C12, complete sequence
          Length = 224617

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    actaacaacacagaacatgg 276
              ||||||||||||||||||||
Sbjct: 216420 actaacaacacagaacatgg 216401
to top
>gb|AY954299.1| Mycobacterium ulcerans isolate ITM 842 laminin-binding protein
           (HupB) mRNA, complete cds
          Length = 636

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           ||||||||||||||| ||||||||
Sbjct: 372 ggccttcttggcgggagccttctt 349
to top
>gb|AY954298.1| Mycobacterium ulcerans isolate ITM 94-1328 laminin-binding protein
           (HupB) mRNA, complete cds
          Length = 636

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           ||||||||||||||| ||||||||
Sbjct: 372 ggccttcttggcgggagccttctt 349
to top
>gb|AY954297.1| Mycobacterium ulcerans isolate ITM 98-912 laminin-binding protein
           (HupB) mRNA, complete cds
          Length = 663

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           ||||||||||||||| ||||||||
Sbjct: 372 ggccttcttggcgggagccttctt 349
to top
>gb|AY954296.1| Mycobacterium ulcerans isolate ITM 5114 laminin-binding protein
           (HupB) mRNA, complete cds
          Length = 663

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           ||||||||||||||| ||||||||
Sbjct: 372 ggccttcttggcgggagccttctt 349
to top
>gb|AY954295.1| Mycobacterium ulcerans isolate ITM 9537 PNG laminin-binding protein
           (HupB) mRNA, complete cds
          Length = 663

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           ||||||||||||||| ||||||||
Sbjct: 372 ggccttcttggcgggagccttctt 349
to top
>gb|AY954294.1| Mycobacterium ulcerans isolate ITM 9540 laminin-binding protein
           (HupB) mRNA, complete cds
          Length = 690

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           ||||||||||||||| ||||||||
Sbjct: 372 ggccttcttggcgggagccttctt 349
to top
>gb|AY954292.1| Mycobacterium ulcerans isolate ITM 97-483 laminin-binding protein
           (HupB) mRNA, complete cds
          Length = 690

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           ||||||||||||||| ||||||||
Sbjct: 372 ggccttcttggcgggagccttctt 349
to top
>gb|BC110349.1| Homo sapiens cDNA clone IMAGE:5212273, containing frame-shift
           errors
          Length = 1805

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 309 cactattttgttctcgacac 290
to top
>gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete sequence
          Length = 87688

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   gtcttggcggccttggcggg 485
             ||||||||||||||||||||
Sbjct: 43677 gtcttggcggccttggcggg 43658
to top
>emb|AL121985.13|HSA404F10 Human DNA sequence from clone RP11-404F10 on chromosome 1q23.1-24.1
             Contains the 5' end of the SLAMF1 gene for signaling
             lymphocytic activation molecule family member 1, a SET
             translocation (myeloid leukemia-associated) (SET)
             pseudogene, a novel gene, the CD48 gene for CD48 antigen
             (B-cell membrane protein), the SLAMF7 gene for SLAM family
             member 7 and the 5' end of the LY9 gene for lymphocyte
             antigen 9, complete sequence
          Length = 195976

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    cactattttgttctcgacac 64
             ||||||||||||||||||||
Sbjct: 24643 cactattttgttctcgacac 24662
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>gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, complete sequence
          Length = 197295

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   cgccgccgccgtcttcgtca 166
             ||||||||||||||||||||
Sbjct: 29641 cgccgccgccgtcttcgtca 29622
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>gb|AC060775.5| Homo sapiens chromosome 8, clone RP11-678D18, complete sequence
          Length = 201956

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 16     atcaatcataattaattagataaa 39
              ||||||||||||||||||| ||||
Sbjct: 146764 atcaatcataattaattagttaaa 146787
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>gb|BC067847.1| Homo sapiens signaling lymphocytic activation molecule family
           member 1, mRNA (cDNA clone IMAGE:30343851), complete cds
          Length = 1947

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 315 cactattttgttctcgacac 296
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>gb|BC022564.1| Homo sapiens zinc finger protein, subfamily 1A, 5, mRNA (cDNA clone
           MGC:27049 IMAGE:4796825), complete cds
          Length = 2916

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 cgccgccgccgtcttcgtca 166
           ||||||||||||||||||||
Sbjct: 61  cgccgccgccgtcttcgtca 42
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>emb|CR859262.1| Pongo pygmaeus mRNA; cDNA DKFZp468N105 (from clone DKFZp468N105)
          Length = 2785

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 cgccgccgccgtcttcgtca 166
           ||||||||||||||||||||
Sbjct: 71  cgccgccgccgtcttcgtca 52
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>emb|BX647958.1|HSM808104 Homo sapiens mRNA; cDNA DKFZp686M0751 (from clone DKFZp686M0751)
          Length = 2914

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 cgccgccgccgtcttcgtca 166
           ||||||||||||||||||||
Sbjct: 55  cgccgccgccgtcttcgtca 36
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>dbj|D26094.1|FVBPOAD2A Flavobacterium sp. plasmid pOAD2 DNA, whole sequence
          Length = 45519

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  tcgccgccgccgtcttcgtc 165
            ||||||||||||||||||||
Sbjct: 8220 tcgccgccgccgtcttcgtc 8201
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>gb|AF526299.1| Mycobacterium avium subsp. paratuberculosis heparin-binding
           hemagglutinin adhesin-like protein gene, complete cds
          Length = 573

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 gccttcttggcgggggcctt 347
           ||||||||||||||||||||
Sbjct: 545 gccttcttggcgggggcctt 526
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>dbj|AK122899.1| Homo sapiens cDNA FLJ16565 fis, clone SYNOV4007711, highly  similar
           to Homo sapiens zinc finger protein, subfamily 1A, 5
           (Pegasus) (PEGASUS)
          Length = 3458

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 cgccgccgccgtcttcgtca 166
           ||||||||||||||||||||
Sbjct: 991 cgccgccgccgtcttcgtca 972
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>emb|CR591039.1| full-length cDNA clone CS0DD002YA03 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1600

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 cgccgccgccgtcttcgtca 166
           ||||||||||||||||||||
Sbjct: 31  cgccgccgccgtcttcgtca 12
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>emb|CR590430.1| full-length cDNA clone CS0DI065YO02 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1687

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 299 cactattttgttctcgacac 280
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>gb|AC079319.19| Homo sapiens 12q BAC RP11-118A3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152449

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    cacagaacatgggaaaactg 284
              ||||||||||||||||||||
Sbjct: 113734 cacagaacatgggaaaactg 113753
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>gb|DQ400925.1| Sus scrofa signaling lymphocytic activation molecule mRNA,
          partial cds
          Length = 190

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 45 cactattttgttctcgacac 64
          ||||||||||||||||||||
Sbjct: 75 cactattttgttctcgacac 56
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>dbj|AK148546.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length
            enriched library, clone:C820020O04 product:hypothetical
            protein, full insert sequence
          Length = 4169

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actaacaacacagaacatgg 276
            ||||||||||||||||||||
Sbjct: 2830 actaacaacacagaacatgg 2811
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>dbj|AK148518.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length
            enriched library, clone:C820017C07 product:hypothetical
            protein, full insert sequence
          Length = 4140

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actaacaacacagaacatgg 276
            ||||||||||||||||||||
Sbjct: 2800 actaacaacacagaacatgg 2781
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>dbj|AK164547.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330037N22 product:hypothetical protein,
            full insert sequence
          Length = 3580

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actaacaacacagaacatgg 276
            ||||||||||||||||||||
Sbjct: 2840 actaacaacacagaacatgg 2821
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>dbj|AK162324.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched
            library, clone:9130009C02 product:hypothetical protein,
            full insert sequence
          Length = 2060

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actaacaacacagaacatgg 276
            ||||||||||||||||||||
Sbjct: 1308 actaacaacacagaacatgg 1289
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>gb|AC008827.6| Homo sapiens chromosome 5 clone CTD-2136P21, complete sequence
          Length = 68144

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   agaacacagaatcctggact 259
             ||||||||||||||||||||
Sbjct: 12636 agaacacagaatcctggact 12617
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>gb|AC091920.2| Homo sapiens chromosome 5 clone RP11-254G13, complete sequence
          Length = 150354

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  agaacacagaatcctggact 259
            ||||||||||||||||||||
Sbjct: 1173 agaacacagaatcctggact 1192
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>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    cgggtgccgccgccttcttc 444
              ||||||||||||||||||||
Sbjct: 590112 cgggtgccgccgccttcttc 590131
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>gb|AY040554.1| Homo sapiens SLAM mRNA, complete cds
          Length = 1008

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 237 cactattttgttctcgacac 218
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 327      ggccttcttggcgggggccttctt 350
                ||||||||||||||| ||||||||
Sbjct: 33092092 ggccttcttggcgggcgccttctt 33092069



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 144      cctcgccgccgccgtcttcg 163
                ||||||||||||||||||||
Sbjct: 12077860 cctcgccgccgccgtcttcg 12077841
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>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20,
              complete sequence
          Length = 144969

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    cctcgccgccgccgtcttcg 163
              ||||||||||||||||||||
Sbjct: 101677 cctcgccgccgccgtcttcg 101658
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>gb|AF302038.1|AF302038 Saguinus oedipus signaling lymphocytic activation molecule 1
           (CDw150) mRNA, complete cds
          Length = 1048

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 246 cactattttgttctcgacac 227
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>gb|AF252303.1|AF252303S1 Homo sapiens signaling lymphocytic activation molecule (SLAM) gene,
           exon 2
          Length = 1456

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 893 cactattttgttctcgacac 874
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>gb|AC008269.4| Homo sapiens BAC clone RP11-95H11 from 2, complete sequence
          Length = 161935

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 347    tcttggcgggcgtggccttcttca 370
              |||||| |||||||||||||||||
Sbjct: 114733 tcttggagggcgtggccttcttca 114756
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>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete
              sequence
          Length = 139823

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 327    ggccttcttggcgggggccttctt 350
              ||||||||||||||| ||||||||
Sbjct: 121726 ggccttcttggcgggcgccttctt 121749
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>gb|AF257239.1|AF257239 Saguinus oedipus CDw150 mRNA, complete cds
          Length = 1480

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 248 cactattttgttctcgacac 229
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>dbj|AB055269.1| Macaca fascicularis brain cDNA, clone:QflA-11070
          Length = 2086

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 cgccgccgccgtcttcgtca 166
           ||||||||||||||||||||
Sbjct: 722 cgccgccgccgtcttcgtca 741
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>dbj|AK026626.1| Homo sapiens cDNA: FLJ22973 fis, clone KAT11042
          Length = 1727

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 cgccgccgccgtcttcgtca 166
           ||||||||||||||||||||
Sbjct: 51  cgccgccgccgtcttcgtca 32
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>dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K04, full
           insert sequence
          Length = 2189

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 cctcgccgccgccgtcttcg 163
           ||||||||||||||||||||
Sbjct: 354 cctcgccgccgccgtcttcg 373
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>gb|AC154822.2| Mus musculus BAC clone RP24-537L18 from 13, complete sequence
          Length = 167628

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   gatataaaatttacagtcta 240
             ||||||||||||||||||||
Sbjct: 37085 gatataaaatttacagtcta 37104
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>dbj|AK099211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E13, full
           insert sequence
          Length = 1328

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           ||||||||||||||| ||||||||
Sbjct: 931 ggccttcttggcgggcgccttctt 908
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>ref|NM_208033.1| Eremothecium gossypii AAR138Cp (AAR138C), mRNA
          Length = 1107

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 425 cgggtgccgccgccttcttc 444
           ||||||||||||||||||||
Sbjct: 424 cgggtgccgccgccttcttc 405
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>dbj|AK067840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128M09, full
           insert sequence
          Length = 1389

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 327 ggccttcttggcgggggccttctt 350
           ||||||||||||||| ||||||||
Sbjct: 931 ggccttcttggcgggcgccttctt 908
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 146     tcgccgccgccgtcttcgtc 165
               ||||||||||||||||||||
Sbjct: 3608073 tcgccgccgccgtcttcgtc 3608054
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    cgtggccttcttcaccggcg 376
              ||||||||||||||||||||
Sbjct: 236641 cgtggccttcttcaccggcg 236622
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>emb|AL807747.10| Mouse DNA sequence from clone RP23-300N21 on chromosome 4, complete
              sequence
          Length = 228003

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    tccacagatacacctcccag 186
              ||||||||||||||||||||
Sbjct: 168870 tccacagatacacctcccag 168851
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>gb|AC140304.3| Mus musculus BAC clone RP23-386K4 from 15, complete sequence
          Length = 215452

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  actaacaacacagaacatgg 276
            ||||||||||||||||||||
Sbjct: 4637 actaacaacacagaacatgg 4656
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>gb|AF008943.1|AF008943 Crithidia fasciculata kinetoplast-associated protein p18-1 (KAP2-1)
           gene, complete cds
          Length = 764

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 cttcttggccttcttggcgg 340
           ||||||||||||||||||||
Sbjct: 411 cttcttggccttcttggcgg 392
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>gb|L41841.1|CREHIH3G Chlamydomonas reinhardtii histone H3, histone H4, histone H2B, and
            histone H2A genes, complete cds
          Length = 4358

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 321  cttcttggccttcttggcgg 340
            ||||||||||||||||||||
Sbjct: 3384 cttcttggccttcttggcgg 3403
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>gb|U09821.1|MSU09821 Mycobacterium smegmatis sigma factor MysA (mysA) gene, complete cds
          Length = 2000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 333 cttggcgggggccttcttggcggg 356
           |||||| |||||||||||||||||
Sbjct: 363 cttggctggggccttcttggcggg 340
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>gb|U33017.1|HSU33017 Human signaling lymphocytic activation molecule (SLAM) mRNA,
           complete cds
          Length = 1789

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  cactattttgttctcgacac 64
           ||||||||||||||||||||
Sbjct: 370 cactattttgttctcgacac 351
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>emb|AL928658.6| Mouse DNA sequence from clone RP23-238A18 on chromosome 2, complete
              sequence
          Length = 220679

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 228    aatttacagtctagaacacagaat 251
              |||||||||||||||| |||||||
Sbjct: 161237 aatttacagtctagaagacagaat 161214


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,517,055
Number of Sequences: 3902068
Number of extensions: 4517055
Number of successful extensions: 97875
Number of sequences better than 10.0: 165
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 95003
Number of HSP's gapped (non-prelim): 2849
length of query: 495
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 473
effective length of database: 17,147,199,772
effective search space: 8110625492156
effective search space used: 8110625492156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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