ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart07a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 125 1e-25
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
3dbj|AK063652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 125 1e-25
5gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.11
6emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete ch... 44 0.42
7gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 44 0.42
8gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy... 44 0.42
9gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.6
10gb|AY657125.1| Synthetic construct Peudomonas aeruginosa clone F... 42 1.6
11ref|XM_752037.1| Ustilago maydis 521 hypothetical protein (UM009... 42 1.6
12gb|AC091696.3| Felis catus clone RP86-117J4, complete sequence 42 1.6
13gb|AC138982.2| Homo sapiens chromosome 5 clone RP13-284O6, compl... 42 1.6
14gb|AE004646.1| Pseudomonas aeruginosa PAO1, section 207 of 529 o... 42 1.6
15dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 1.6
16dbj|AK101216.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
17gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 1.6
18gb|AC092266.4| Homo sapiens chromosome 5 clone RP11-24P24, compl... 42 1.6
19gb|AY823556.1| Pennisetum glaucum DRE binding factor mRNA, parti... 40 6.5
20ref|NM_186422.2| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
21ref|XM_506174.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.5
22ref|XM_959036.1| Neurospora crassa OR74A hypothetical protein ( ... 40 6.5
23ref|XM_330026.1| Neurospora crassa OR74A hypothetical protein ( ... 40 6.5
24gb|AC166982.4| Mus musculus chromosome 18, clone RP24-377P23, co... 40 6.5
25emb|Z81563.1|CEK04H8 Caenorhabditis elegans Cosmid K04H8, comple... 40 6.5
26gb|AC121524.6| Mus musculus chromosome 18, clone RP24-342F19, co... 40 6.5
27ref|XM_783396.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.5
28emb|BX842624.1| Neurospora crassa DNA linkage group I BAC clone ... 40 6.5
29emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 40 6.5
30emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 40 6.5
31emb|AL583922.1|MLEPRTN6 Mycobacterium leprae strain TN complete ... 40 6.5
32gb|AC114284.2| Homo sapiens chromosome 5 clone CTD-2334D19, comp... 40 6.5
33gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.5
34gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.5
35ref|NM_061090.1| Caenorhabditis elegans K04H8.3 (K04H8.3) mRNA, ... 40 6.5
36gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.5
37dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
39dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.5
40dbj|AP005773.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
41dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
42gb|AE004977.1| Halobacterium sp. NRC-1 section 8 of 170 of the c... 40 6.5
43emb|Y17736.2|SCY17736 Streptomyces coelicolor partial nadE, glnE... 40 6.5
44dbj|AK106274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
45dbj|AK105789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
46ref|NM_209635.1| Eremothecium gossypii ADR186Cp (ADR186C), mRNA 40 6.5
47dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
48emb|AM238660.1| Zea mays mRNA for putative beta-glycosidase (sfr... 40 6.5
49gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.5 
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0080I08, complete sequence
          Length = 197156

 Score =  125 bits (63), Expect = 1e-25
 Identities = 152/181 (83%), Gaps = 3/181 (1%)
 Strand = Plus / Plus

                                                                         
Query: 303   acgccgacgtccttgagcgtcaccgccttcctcgccgggtagtcggcgacggggtcggcg 362
             |||||| |||||||||| || || |||||||| |||||||| ||||||||||||||||||
Sbjct: 29329 acgccggcgtccttgagggtgacggccttcctggccgggtactcggcgacggggtcggcg 29388

                                                                         
Query: 363   ---acgccggcggtgagggagcggtcgtcctggacgtgggcgaccttccggaacatggag 419
                |||||||||  ||| |||  ||||||||| ||||| || ||||| |||||||  || 
Sbjct: 29389 gcgacgccggcgcggagcgaggcgtcgtcctgcacgtgcgccaccttgcggaacagcgac 29448

                                                                         
Query: 420   ccgccgacgaagcgctcggcctcgtcgagggcgaggtccgggtcggccacctcgggcacc 479
             ||||||||||| ||||| ||||||||||| || | ||||||  | |||||||||||||||
Sbjct: 29449 ccgccgacgaaccgctccgcctcgtcgagcgccatgtccggcgccgccacctcgggcacc 29508

              
Query: 480   g 480
             |
Sbjct: 29509 g 29509
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  125 bits (63), Expect = 1e-25
 Identities = 152/181 (83%), Gaps = 3/181 (1%)
 Strand = Plus / Plus

                                                                            
Query: 303      acgccgacgtccttgagcgtcaccgccttcctcgccgggtagtcggcgacggggtcggcg 362
                |||||| |||||||||| || || |||||||| |||||||| ||||||||||||||||||
Sbjct: 18764062 acgccggcgtccttgagggtgacggccttcctggccgggtactcggcgacggggtcggcg 18764121

                                                                            
Query: 363      ---acgccggcggtgagggagcggtcgtcctggacgtgggcgaccttccggaacatggag 419
                   |||||||||  ||| |||  ||||||||| ||||| || ||||| |||||||  || 
Sbjct: 18764122 gcgacgccggcgcggagcgaggcgtcgtcctgcacgtgcgccaccttgcggaacagcgac 18764181

                                                                            
Query: 420      ccgccgacgaagcgctcggcctcgtcgagggcgaggtccgggtcggccacctcgggcacc 479
                ||||||||||| ||||| ||||||||||| || | ||||||  | |||||||||||||||
Sbjct: 18764182 ccgccgacgaaccgctccgcctcgtcgagcgccatgtccggcgccgccacctcgggcacc 18764241

                 
Query: 480      g 480
                |
Sbjct: 18764242 g 18764242
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>dbj|AK063652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-B03, full
           insert sequence
          Length = 770

 Score =  125 bits (63), Expect = 1e-25
 Identities = 152/181 (83%), Gaps = 3/181 (1%)
 Strand = Plus / Minus

                                                                       
Query: 303 acgccgacgtccttgagcgtcaccgccttcctcgccgggtagtcggcgacggggtcggcg 362
           |||||| |||||||||| || || |||||||| |||||||| ||||||||||||||||||
Sbjct: 502 acgccggcgtccttgagggtgacggccttcctggccgggtactcggcgacggggtcggcg 443

                                                                       
Query: 363 ---acgccggcggtgagggagcggtcgtcctggacgtgggcgaccttccggaacatggag 419
              |||||||||  ||| |||  ||||||||| ||||| || ||||| |||||||  || 
Sbjct: 442 gcgacgccggcgcggagcgaggcgtcgtcctgcacgtgcgccaccttgcggaacagcgac 383

                                                                       
Query: 420 ccgccgacgaagcgctcggcctcgtcgagggcgaggtccgggtcggccacctcgggcacc 479
           ||||||||||| ||||| ||||||||||| || | ||||||  | |||||||||||||||
Sbjct: 382 ccgccgacgaaccgctccgcctcgtcgagcgccatgtccggcgccgccacctcgggcacc 323

            
Query: 480 g 480
           |
Sbjct: 322 g 322
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  125 bits (63), Expect = 1e-25
 Identities = 152/181 (83%), Gaps = 3/181 (1%)
 Strand = Plus / Plus

                                                                            
Query: 303      acgccgacgtccttgagcgtcaccgccttcctcgccgggtagtcggcgacggggtcggcg 362
                |||||| |||||||||| || || |||||||| |||||||| ||||||||||||||||||
Sbjct: 18924135 acgccggcgtccttgagggtgacggccttcctggccgggtactcggcgacggggtcggcg 18924194

                                                                            
Query: 363      ---acgccggcggtgagggagcggtcgtcctggacgtgggcgaccttccggaacatggag 419
                   |||||||||  ||| |||  ||||||||| ||||| || ||||| |||||||  || 
Sbjct: 18924195 gcgacgccggcgcggagcgaggcgtcgtcctgcacgtgcgccaccttgcggaacagcgac 18924254

                                                                            
Query: 420      ccgccgacgaagcgctcggcctcgtcgagggcgaggtccgggtcggccacctcgggcacc 479
                ||||||||||| ||||| ||||||||||| || | ||||||  | |||||||||||||||
Sbjct: 18924255 ccgccgacgaaccgctccgcctcgtcgagcgccatgtccggcgccgccacctcgggcacc 18924314

                 
Query: 480      g 480
                |
Sbjct: 18924315 g 18924315
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 433     gctcggcctcgtcgagggcgaggtccgggtc 463
               ||||||||||| |||||||||||| ||||||
Sbjct: 4164832 gctcggcctcggcgagggcgaggtgcgggtc 4164802
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>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12
          Length = 299350

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 421   cgccgacgaagcgctcggcctc 442
             ||||||||||||||||||||||
Sbjct: 38544 cgccgacgaagcgctcggcctc 38523
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 427    cgaagcgctcggcctcgtcgagggcg 452
              |||| |||||||||||||||||||||
Sbjct: 211592 cgaaacgctcggcctcgtcgagggcg 211617
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>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster,
             complete sequence
          Length = 59816

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 433   gctcggcctcgtcgagggcgaggtcc 458
             ||||||||||||||||| ||||||||
Sbjct: 30411 gctcggcctcgtcgaggtcgaggtcc 30386
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 344     gtcggcgacggggtcggcgacgccg 368
               ||||||||||| |||||||||||||
Sbjct: 1149335 gtcggcgacggcgtcggcgacgccg 1149311
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>gb|AY657125.1| Synthetic construct Peudomonas aeruginosa clone FLH032883.01F
           PA2198 gene, partial cds
          Length = 345

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 425 gacgaagcgctcggcctcgtcgagg 449
           |||||||||| ||||||||||||||
Sbjct: 162 gacgaagcgcccggcctcgtcgagg 138
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>ref|XM_752037.1| Ustilago maydis 521 hypothetical protein (UM00983.1) partial mRNA
          Length = 6582

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 187  gggaccgaaatcgaagcgtgc 207
            |||||||||||||||||||||
Sbjct: 4416 gggaccgaaatcgaagcgtgc 4436
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>gb|AC091696.3| Felis catus clone RP86-117J4, complete sequence
          Length = 136083

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     aaagagaaaaaagagagtagg 21
             |||||||||||||||||||||
Sbjct: 32271 aaagagaaaaaagagagtagg 32251
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>gb|AC138982.2| Homo sapiens chromosome 5 clone RP13-284O6, complete sequence
          Length = 110563

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 262  ggacgccctccctgctctgct 282
            |||||||||||||||||||||
Sbjct: 6260 ggacgccctccctgctctgct 6240
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>gb|AE004646.1| Pseudomonas aeruginosa PAO1, section 207 of 529 of the complete
            genome
          Length = 11244

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 425  gacgaagcgctcggcctcgtcgagg 449
            |||||||||| ||||||||||||||
Sbjct: 6007 gacgaagcgcccggcctcgtcgagg 5983
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 289    tccccggcgggtccacgccga 309
              |||||||||||||||||||||
Sbjct: 440584 tccccggcgggtccacgccga 440564
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>dbj|AK101216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B21, full
           insert sequence
          Length = 2004

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 352 cggggtcggcgacgccggcgg 372
           |||||||||||||||||||||
Sbjct: 55  cggggtcggcgacgccggcgg 75
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 289   tccccggcgggtccacgccga 309
             |||||||||||||||||||||
Sbjct: 89227 tccccggcgggtccacgccga 89207
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>gb|AC092266.4| Homo sapiens chromosome 5 clone RP11-24P24, complete sequence
          Length = 171601

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 262   ggacgccctccctgctctgct 282
             |||||||||||||||||||||
Sbjct: 58674 ggacgccctccctgctctgct 58694
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>gb|AY823556.1| Pennisetum glaucum DRE binding factor mRNA, partial cds
          Length = 489

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 426 acgaagcgctcggcctcgtc 445
           ||||||||||||||||||||
Sbjct: 179 acgaagcgctcggcctcgtc 160
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>ref|NM_186422.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1189

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 332 cctcgccgggtagtcggcgacggggtcg 359
           |||||||| ||||||||||||| |||||
Sbjct: 903 cctcgccgcgtagtcggcgacgcggtcg 876
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>ref|XM_506174.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.153
           mRNA
          Length = 1772

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 332 cctcgccgggtagtcggcgacggggtcg 359
           |||||||| ||||||||||||| |||||
Sbjct: 903 cctcgccgcgtagtcggcgacgcggtcg 876
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>ref|XM_959036.1| Neurospora crassa OR74A hypothetical protein ( probable chaperonin
            CCT4 [imported] - Neurospora crassa OR74A  ) (NCU02839.1)
            partial mRNA
          Length = 1602

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 430  agcgctcggcctcgtcgagg 449
            ||||||||||||||||||||
Sbjct: 1189 agcgctcggcctcgtcgagg 1170
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>ref|XM_330026.1| Neurospora crassa OR74A hypothetical protein ( probable chaperonin
            CCT4 [imported] - Neurospora crassa OR74A  ) (NCU02839.1)
            partial mRNA
          Length = 1602

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 430  agcgctcggcctcgtcgagg 449
            ||||||||||||||||||||
Sbjct: 1189 agcgctcggcctcgtcgagg 1170
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>gb|AC166982.4| Mus musculus chromosome 18, clone RP24-377P23, complete sequence
          Length = 154269

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 25     atagttttattgtcgaggaacaaa 48
              |||||||||||||| |||||||||
Sbjct: 123461 atagttttattgtctaggaacaaa 123484
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>emb|Z81563.1|CEK04H8 Caenorhabditis elegans Cosmid K04H8, complete sequence
          Length = 10403

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 251  gatcctgtccaggacgccct 270
            ||||||||||||||||||||
Sbjct: 6227 gatcctgtccaggacgccct 6246
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>gb|AC121524.6| Mus musculus chromosome 18, clone RP24-342F19, complete sequence
          Length = 148255

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 25    atagttttattgtcgaggaacaaa 48
             |||||||||||||| |||||||||
Sbjct: 42729 atagttttattgtctaggaacaaa 42706
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>ref|XM_783396.1| PREDICTED: Strongylocentrotus purpuratus similar to deleted in
            malignant brain tumors 1 isoform c precursor (LOC583490),
            mRNA
          Length = 2094

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 370  cggtgagggagcggtcgtcctgga 393
            |||||||||| |||||||||||||
Sbjct: 1281 cggtgagggaccggtcgtcctgga 1304
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>emb|BX842624.1| Neurospora crassa DNA linkage group I BAC clone B10D6
          Length = 89019

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   agcgctcggcctcgtcgagg 449
             ||||||||||||||||||||
Sbjct: 85261 agcgctcggcctcgtcgagg 85242
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 404   cttccggaacatggagccgccgacgaagcgctcggc 439
             ||||||||| |||| || |||| |||||||||||||
Sbjct: 85228 cttccggaagatggtgctgccgccgaagcgctcggc 85263
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agggcgaggtccgggtcggc 466
              ||||||||||||||||||||
Sbjct: 303602 agggcgaggtccgggtcggc 303621
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>emb|AL583922.1|MLEPRTN6 Mycobacterium leprae strain TN complete genome; segment 6/10
          Length = 318200

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    cgggtagtcggcgacggggt 357
              ||||||||||||||||||||
Sbjct: 159617 cgggtagtcggcgacggggt 159636
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>gb|AC114284.2| Homo sapiens chromosome 5 clone CTD-2334D19, complete sequence
          Length = 126480

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aaagagaaaaaagagagtag 20
              ||||||||||||||||||||
Sbjct: 107931 aaagagaaaaaagagagtag 107912
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 445     cgagggcgaggtccgggtcg 464
               ||||||||||||||||||||
Sbjct: 4116837 cgagggcgaggtccgggtcg 4116856
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>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
               complete sequence
          Length = 1466886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 311     gtccttgagcgtcaccgcct 330
               ||||||||||||||||||||
Sbjct: 1030006 gtccttgagcgtcaccgcct 1030025
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>ref|NM_061090.1| Caenorhabditis elegans K04H8.3 (K04H8.3) mRNA, complete cds
          Length = 669

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 251 gatcctgtccaggacgccct 270
           ||||||||||||||||||||
Sbjct: 109 gatcctgtccaggacgccct 128
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 427    cgaagcgctcggcctcgtcg 446
              ||||||||||||||||||||
Sbjct: 330053 cgaagcgctcggcctcgtcg 330034
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 332     cctcgccgggtagtcggcgacggggtcg 359
               |||||||| ||||||||||||| |||||
Sbjct: 3377801 cctcgccgcgtagtcggcgacgcggtcg 3377828
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 355      ggtcggcgacgccggcggtgaggg 378
                |||||||||| |||||||||||||
Sbjct: 18451277 ggtcggcgacaccggcggtgaggg 18451300
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 355     ggtcggcgacgccggcggtgaggg 378
               ||||||||||| ||||||||||||
Sbjct: 4887414 ggtcggcgacggcggcggtgaggg 4887391
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>dbj|AP005773.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085C03
          Length = 188905

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 355   ggtcggcgacgccggcggtgaggg 378
             |||||||||| |||||||||||||
Sbjct: 34160 ggtcggcgacaccggcggtgaggg 34183
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>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0428D12
          Length = 141678

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 332   cctcgccgggtagtcggcgacggggtcg 359
             |||||||| ||||||||||||| |||||
Sbjct: 17621 cctcgccgcgtagtcggcgacgcggtcg 17648
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>gb|AE004977.1| Halobacterium sp. NRC-1 section 8 of 170 of the complete genome
          Length = 10177

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  cggtcgtcctggacgtgggc 400
            ||||||||||||||||||||
Sbjct: 1098 cggtcgtcctggacgtgggc 1079
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>emb|Y17736.2|SCY17736 Streptomyces coelicolor partial nadE, glnE genes and orfu2E and
            orfu1E
          Length = 5190

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 447  agggcgaggtccgggtcggc 466
            ||||||||||||||||||||
Sbjct: 3005 agggcgaggtccgggtcggc 2986
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>dbj|AK106274.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-G12, full
           insert sequence
          Length = 1772

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 332 cctcgccgggtagtcggcgacggggtcg 359
           |||||||| ||||||||||||| |||||
Sbjct: 903 cctcgccgcgtagtcggcgacgcggtcg 876
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>dbj|AK105789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H03, full
           insert sequence
          Length = 1189

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 332 cctcgccgggtagtcggcgacggggtcg 359
           |||||||| ||||||||||||| |||||
Sbjct: 903 cctcgccgcgtagtcggcgacgcggtcg 876
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>ref|NM_209635.1| Eremothecium gossypii ADR186Cp (ADR186C), mRNA
          Length = 525

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 gtccttgagcgtcaccgcct 330
           ||||||||||||||||||||
Sbjct: 381 gtccttgagcgtcaccgcct 362
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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1714_H10
          Length = 191580

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 332    cctcgccgggtagtcggcgacggggtcg 359
              |||||||| ||||||||||||| |||||
Sbjct: 187494 cctcgccgcgtagtcggcgacgcggtcg 187521
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>emb|AM238660.1| Zea mays mRNA for putative beta-glycosidase (sfr2 gene), from leaf
           tissue
          Length = 1977

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 agtcggcgacggggtcggcg 362
           ||||||||||||||||||||
Sbjct: 160 agtcggcgacggggtcggcg 141
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 427     cgaagcgctcggcctcgtcg 446
               ||||||||||||||||||||
Sbjct: 3179738 cgaagcgctcggcctcgtcg 3179757


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,441,113
Number of Sequences: 3902068
Number of extensions: 3441113
Number of successful extensions: 76130
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74653
Number of HSP's gapped (non-prelim): 1473
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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