ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart07a09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475522.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 210 bits (106), Expect = 3e-51 Identities = 205/238 (86%) Strand = Plus / Minus Query: 182 agaactggaacctgctcggccgggacttggtcatcctggccatgccgtacgactcatcgt 241 |||||||||||||||| || | | |||||||||||| ||||| || ||| ||| |||| Sbjct: 1018 agaactggaacctgctaggttgagtcttggtcatccttgccataccaaacggctcgtcgt 959 Query: 242 tgtcgtccctcttggcgttgcggaacgcggcgcagccggcgacgtagacgatgacgagga 301 | ||| |||| ||||||||||||| ||||| ||||| || || || ||||||||||||| Sbjct: 958 tttcgatcctcctggcgttgcggaaagcggcacagccagcaacatacacgatgacgagga 899 Query: 302 tgatgagcacgacgatgttgatgatggccaccttgcgccagctcttcttgatgccggcca 361 |||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | Sbjct: 898 tgatcagcacgacgatgttgaggatggcaaccttacgccagctcttcttgatgccagcga 839 Query: 362 ggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 ||||||| |||||||| ||||| ||||||||||| | |||||||||||| |||||||| Sbjct: 838 ggacgcctgccttgcaggagtcacactggaagcaaagcgtctgctggtcattgctcca 781
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 210 bits (106), Expect = 3e-51 Identities = 205/238 (86%) Strand = Plus / Minus Query: 182 agaactggaacctgctcggccgggacttggtcatcctggccatgccgtacgactcatcgt 241 |||||||||||||||| || | | |||||||||||| ||||| || ||| ||| |||| Sbjct: 1197956 agaactggaacctgctaggttgagtcttggtcatccttgccataccaaacggctcgtcgt 1197897 Query: 242 tgtcgtccctcttggcgttgcggaacgcggcgcagccggcgacgtagacgatgacgagga 301 | ||| |||| ||||||||||||| ||||| ||||| || || || ||||||||||||| Sbjct: 1197896 tttcgatcctcctggcgttgcggaaagcggcacagccagcaacatacacgatgacgagga 1197837 Query: 302 tgatgagcacgacgatgttgatgatggccaccttgcgccagctcttcttgatgccggcca 361 |||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | Sbjct: 1197836 tgatcagcacgacgatgttgaggatggcaaccttacgccagctcttcttgatgccagcga 1197777 Query: 362 ggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 ||||||| |||||||| ||||| ||||||||||| | |||||||||||| |||||||| Sbjct: 1197776 ggacgcctgccttgcaggagtcacactggaagcaaagcgtctgctggtcattgctcca 1197719
>dbj|AK068516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M14, full insert sequence Length = 1458 Score = 210 bits (106), Expect = 3e-51 Identities = 205/238 (86%) Strand = Plus / Minus Query: 182 agaactggaacctgctcggccgggacttggtcatcctggccatgccgtacgactcatcgt 241 |||||||||||||||| || | | |||||||||||| ||||| || ||| ||| |||| Sbjct: 1082 agaactggaacctgctaggttgagtcttggtcatccttgccataccaaacggctcgtcgt 1023 Query: 242 tgtcgtccctcttggcgttgcggaacgcggcgcagccggcgacgtagacgatgacgagga 301 | ||| |||| ||||||||||||| ||||| ||||| || || || ||||||||||||| Sbjct: 1022 tttcgatcctcctggcgttgcggaaagcggcacagccagcaacatacacgatgacgagga 963 Query: 302 tgatgagcacgacgatgttgatgatggccaccttgcgccagctcttcttgatgccggcca 361 |||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | Sbjct: 962 tgatcagcacgacgatgttgaggatggcaaccttacgccagctcttcttgatgccagcga 903 Query: 362 ggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 ||||||| |||||||| ||||| ||||||||||| | |||||||||||| |||||||| Sbjct: 902 ggacgcctgccttgcaggagtcacactggaagcaaagcgtctgctggtcattgctcca 845
>dbj|AK065567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033D20, full insert sequence Length = 2066 Score = 210 bits (106), Expect = 3e-51 Identities = 205/238 (86%) Strand = Plus / Minus Query: 182 agaactggaacctgctcggccgggacttggtcatcctggccatgccgtacgactcatcgt 241 |||||||||||||||| || | | |||||||||||| ||||| || ||| ||| |||| Sbjct: 1726 agaactggaacctgctaggttgagtcttggtcatccttgccataccaaacggctcgtcgt 1667 Query: 242 tgtcgtccctcttggcgttgcggaacgcggcgcagccggcgacgtagacgatgacgagga 301 | ||| |||| ||||||||||||| ||||| ||||| || || || ||||||||||||| Sbjct: 1666 tttcgatcctcctggcgttgcggaaagcggcacagccagcaacatacacgatgacgagga 1607 Query: 302 tgatgagcacgacgatgttgatgatggccaccttgcgccagctcttcttgatgccggcca 361 |||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | Sbjct: 1606 tgatcagcacgacgatgttgaggatggcaaccttacgccagctcttcttgatgccagcga 1547 Query: 362 ggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 ||||||| |||||||| ||||| ||||||||||| | |||||||||||| |||||||| Sbjct: 1546 ggacgcctgccttgcaggagtcacactggaagcaaagcgtctgctggtcattgctcca 1489
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 210 bits (106), Expect = 3e-51 Identities = 205/238 (86%) Strand = Plus / Minus Query: 182 agaactggaacctgctcggccgggacttggtcatcctggccatgccgtacgactcatcgt 241 |||||||||||||||| || | | |||||||||||| ||||| || ||| ||| |||| Sbjct: 48242 agaactggaacctgctaggttgagtcttggtcatccttgccataccaaacggctcgtcgt 48183 Query: 242 tgtcgtccctcttggcgttgcggaacgcggcgcagccggcgacgtagacgatgacgagga 301 | ||| |||| ||||||||||||| ||||| ||||| || || || ||||||||||||| Sbjct: 48182 tttcgatcctcctggcgttgcggaaagcggcacagccagcaacatacacgatgacgagga 48123 Query: 302 tgatgagcacgacgatgttgatgatggccaccttgcgccagctcttcttgatgccggcca 361 |||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| || | Sbjct: 48122 tgatcagcacgacgatgttgaggatggcaaccttacgccagctcttcttgatgccagcga 48063 Query: 362 ggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 ||||||| |||||||| ||||| ||||||||||| | |||||||||||| |||||||| Sbjct: 48062 ggacgcctgccttgcaggagtcacactggaagcaaagcgtctgctggtcattgctcca 48005
>gb|AY107497.1| Zea mays PCO100488 mRNA sequence Length = 836 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 178 gcctagaactggaacctgctcggccgggacttggtcatcctggccatgccgtacgactca 237 |||||||||||||||||||| || ||||||||||||||| |||||||| || ||| Sbjct: 541 gcctagaactggaacctgcttggatgggacttggtcatccgcgccatgcccaccggctcg 482 Query: 238 tcgttgtcgtccctcttggcgttgcggaacgcggcg 273 ||||||||| ||||||||||||||||||||||||| Sbjct: 481 tcgttgtcgatcctcttggcgttgcggaacgcggcg 446
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 ttcttgatgccggccaggacgccagccttgcacgagtcgcactggaagcacaacgtctgc 405 ||||||||| || |||||| |||||||||||| ||||||||||||||||| | |||||| Sbjct: 8328439 ttcttgatgtcgtccaggaagccagccttgcatgagtcgcactggaagcagagcgtctgt 8328380 Query: 406 tggtcgttgctcca 419 |||| ||||||||| Sbjct: 8328379 tggttgttgctcca 8328366
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 346 ttcttgatgccggccaggacgccagccttgcacgagtcgcactggaagcacaacgtctgc 405 ||||||||| || |||||| |||||||||||| ||||||||||||||||| | |||||| Sbjct: 8328322 ttcttgatgtcgtccaggaagccagccttgcatgagtcgcactggaagcagagcgtctgt 8328263 Query: 406 tggtcgttgctcca 419 |||| ||||||||| Sbjct: 8328262 tggttgttgctcca 8328249
>emb|AL772416.6|CNS08C9U Oryza sativa chromosome 12, . BAC OSJNBa0095H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142670 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 346 ttcttgatgccggccaggacgccagccttgcacgagtcgcactggaagcacaacgtctgc 405 ||||||||| || |||||| |||||||||||| ||||||||||||||||| | |||||| Sbjct: 14454 ttcttgatgtcgtccaggaagccagccttgcatgagtcgcactggaagcagagcgtctgt 14513 Query: 406 tggtcgttgctcca 419 |||| ||||||||| Sbjct: 14514 tggttgttgctcca 14527
>emb|AL731877.4|CNS08C8H Oryza sativa chromosome 12, . BAC OJ1368_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104296 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 346 ttcttgatgccggccaggacgccagccttgcacgagtcgcactggaagcacaacgtctgc 405 ||||||||| || |||||| |||||||||||| ||||||||||||||||| | |||||| Sbjct: 72058 ttcttgatgtcgtccaggaagccagccttgcatgagtcgcactggaagcagagcgtctgt 72117 Query: 406 tggtcgttgctcca 419 |||| ||||||||| Sbjct: 72118 tggttgttgctcca 72131
>ref|XM_470436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 894 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 361 aggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 |||| |||||||||||||||||||||||||||||| | ||| || |||||||||||||| Sbjct: 761 aggaagccagccttgcacgagtcgcactggaagcaaagcgtttgatggtcgttgctcca 703
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 361 aggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 |||| |||||||||||||||||||||||||||||| | ||| || |||||||||||||| Sbjct: 11693 aggaagccagccttgcacgagtcgcactggaagcaaagcgtttgatggtcgttgctcca 11635 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 361 aggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 |||| ||| |||||||| || |||||||||||||| | | | || |||||||||||||| Sbjct: 17567 aggaagcctgccttgcatgaatcgcactggaagcagagcttttgttggtcgttgctcca 17509
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 361 aggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 |||| |||||||||||||||||||||||||||||| | ||| || |||||||||||||| Sbjct: 35613915 aggaagccagccttgcacgagtcgcactggaagcaaagcgtttgatggtcgttgctcca 35613857 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 361 aggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 |||| ||| |||||||| || |||||||||||||| | | | || |||||||||||||| Sbjct: 35619789 aggaagcctgccttgcatgaatcgcactggaagcagagcttttgttggtcgttgctcca 35619731
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 361 aggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 |||| |||||||||||||||||||||||||||||| | ||| || |||||||||||||| Sbjct: 35703988 aggaagccagccttgcacgagtcgcactggaagcaaagcgtttgatggtcgttgctcca 35703930 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 361 aggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 |||| ||| |||||||| || |||||||||||||| | | | || |||||||||||||| Sbjct: 35709862 aggaagcctgccttgcatgaatcgcactggaagcagagcttttgttggtcgttgctcca 35709804
>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0096A19 map near 50283S, complete sequence Length = 139969 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagcacgacgatgttgatgatg 327 |||||||||||||||||| | ||||||| |||||||| Sbjct: 61899 gatgacgaggatgatgaggatgacgatgatgatgatg 61863
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagcacgacgatgttgatgatg 327 |||||||||||||||||| | ||||||| |||||||| Sbjct: 13824340 gatgacgaggatgatgaggatgacgatgatgatgatg 13824304
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagcacgacgatgttgatgatg 327 |||||||||||||||||| | ||||||| |||||||| Sbjct: 13906342 gatgacgaggatgatgaggatgacgatgatgatgatg 13906306
>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12 Length = 299350 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 284 cgtagacgatgacgaggatgatgagcacgacg 315 ||||||||| ||||||||||||||||| |||| Sbjct: 193679 cgtagacgacgacgaggatgatgagcaggacg 193710
>gb|BC034181.1| Mus musculus cation channel, sperm associated 2, mRNA (cDNA clone IMAGE:4973163), with apparent retained intron Length = 2283 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| ||||||||| |||||||| Sbjct: 643 gacgatgacgacgatgatgacgacgacgatgatgatgatg 682
>gb|AC110820.4| Mus musculus BAC clone RP23-273L3 from 15, complete sequence Length = 168415 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| ||||||||| |||||||| Sbjct: 25400 gacgatgacgatgatgatgacgacgacgatgatgatgatg 25439
>ref|XM_762139.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_113_10176_13586) partial mRNA Length = 3411 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| ||||||||| |||||||| Sbjct: 2137 gacgatgacgatgatgatgacgacgacgatgatgatgatg 2176
>dbj|AK142380.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430028F24 product:cation channel, sperm associated 2, full insert sequence Length = 2130 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| ||||||||| |||||||| Sbjct: 511 gacgatgacgacgatgatgacgacgacgatgatgatgatg 550
>gb|AF411816.1|AF411816 Mus musculus putative ion channel protein CATSPER2 mRNA, complete cds Length = 1986 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| ||||||||| |||||||| Sbjct: 1326 gacgatgacgacgatgatgacgacgacgatgatgatgatg 1365
>gb|AC154614.3| Mus musculus BAC clone RP23-255I2 from chromosome 14, complete sequence Length = 186187 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| ||||||||| |||||||| Sbjct: 67925 gacgatgacgatgatgatgatgacgacgatgatgatgatg 67886
>emb|AL845466.4| Mouse DNA sequence from clone RP23-433P19 on chromosome 2, complete sequence Length = 197839 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| ||||||||| |||||||| Sbjct: 104475 gacgatgacgacgatgatgacgacgacgatgatgatgatg 104436
>ref|NM_153075.1| Mus musculus cation channel, sperm associated 2 (Catsper2), mRNA Length = 1986 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| ||||||||| |||||||| Sbjct: 1326 gacgatgacgacgatgatgacgacgacgatgatgatgatg 1365
>gb|BT016475.1| Zea mays clone Contig308 mRNA sequence Length = 891 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 291 gatgacgaggatgatgagcacgacgatgttgatga 325 |||||||||||||||||| | ||||||| |||||| Sbjct: 166 gatgacgaggatgatgaggatgacgatgatgatga 200
>ref|XM_323489.1| Neurospora crassa OR74A hypothetical protein (NCU04150.1) partial mRNA Length = 975 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatg 318 |||||||||||||||||||| ||||||||| Sbjct: 799 gacgatgacgaggatgatgatgacgacgatg 829
>ref|XM_956213.1| Neurospora crassa OR74A hypothetical protein (NCU04150.1) partial mRNA Length = 975 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatg 318 |||||||||||||||||||| ||||||||| Sbjct: 799 gacgatgacgaggatgatgatgacgacgatg 829
>emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmid contig 9G6 Length = 125561 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 288 gacgatgacgaggatgatgagcacgacgatg 318 |||||||||||||||||||| ||||||||| Sbjct: 28245 gacgatgacgaggatgatgatgacgacgatg 28215
>ref|NM_164830.3| Drosophila melanogaster Sema-1a CG18405-RA (Sema-1a), mRNA Length = 5310 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgac 314 ||||||||||| ||||||||||||||| Sbjct: 4364 gacgatgacgatgatgatgagcacgac 4390
>gb|AC008331.7|AC008331 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone BACR02B16, complete sequence Length = 186938 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgac 314 ||||||||||| ||||||||||||||| Sbjct: 85175 gacgatgacgatgatgatgagcacgac 85201
>dbj|AK109128.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-D07, full insert sequence Length = 970 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 361 aggacgccagccttgcacgagtcgcactggaagcacaacgtctgctggtcgttgctcca 419 |||| ||| |||||||| || |||||||||||||| | | | || |||||||||||||| Sbjct: 799 aggaagcctgccttgcatgaatcgcactggaagcagagcttttgttggtcgttgctcca 741
>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete sequence Length = 308031 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgac 314 ||||||||||| ||||||||||||||| Sbjct: 304815 gacgatgacgatgatgatgagcacgac 304841
>gb|L26082.1|DRODSEM Drosophila melanogastor semaphorin-I (Dsema-I) mRNA, complete cds Length = 8024 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgac 314 ||||||||||| ||||||||||||||| Sbjct: 7081 gacgatgacgatgatgatgagcacgac 7107 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgac 314 ||||||||||| ||||||||||||||| Sbjct: 3069 gacgatgacgatgatgatgagcacgac 3095
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 cgcggcgcagccggcgacgtag 288 |||||||||||||||||||||| Sbjct: 1959544 cgcggcgcagccggcgacgtag 1959565
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 agctcttcttgatgccggcca 361 ||||||||||||||||||||| Sbjct: 1131955 agctcttcttgatgccggcca 1131975
>ref|NM_189510.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 897 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 359 ccaggacgccagccttgcacgagtcgcac 387 |||| ||||| |||||||||||||||||| Sbjct: 673 ccagcacgccggccttgcacgagtcgcac 645
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatgg 328 |||||||||||||| ||||| | ||||||| ||||||||| Sbjct: 1658067 gacgatgacgaggacgatgacgaggacgatgatgatgatgg 1658107
>ref|XM_460054.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E18040g) partial mRNA Length = 1824 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatgg 328 |||||||| || ||||||||| |||| || ||||||||||| Sbjct: 1567 gacgatgatgacgatgatgagaacgaagaggttgatgatgg 1607
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 gatgatgagcacgacgatgttgatg 324 ||||| ||||||||||||||||||| Sbjct: 71589 gatgacgagcacgacgatgttgatg 71565
>ref|XM_756696.1| Ustilago maydis 521 hypothetical protein (UM05642.1) partial mRNA Length = 4404 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 ggcgacgtagacgatgacgag 299 ||||||||||||||||||||| Sbjct: 4347 ggcgacgtagacgatgacgag 4327
>ref|XM_569760.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNC05550) partial mRNA Length = 2268 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatgg 328 |||||||||||||| ||||| | ||||||| ||||||||| Sbjct: 1918 gacgatgacgaggacgatgacgaggacgatgatgatgatgg 1958
>gb|AC132118.3| Mus musculus BAC clone RP23-467C14 from chromosome 5, complete sequence Length = 175070 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 cgatccaagaacaccttccct 21 ||||||||||||||||||||| Sbjct: 141133 cgatccaagaacaccttccct 141153
>emb|Z12018.1|CEZK638 Caenorhabditis elegans Cosmid ZK638, complete sequence Length = 1762 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 gacgaggatgatgagcacgacgatg 318 |||||||||||||||| |||||||| Sbjct: 308 gacgaggatgatgagctcgacgatg 284
>ref|NM_002248.3| Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 (KCNN1), mRNA Length = 2657 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgag 308 ||||||||||||||||||||| Sbjct: 509 gacgatgacgaggatgatgag 529
>gb|AC162802.4| Mus musculus BAC clone RP23-363M4 from chromosome 5, complete sequence Length = 234206 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 cgatccaagaacaccttccct 21 ||||||||||||||||||||| Sbjct: 77720 cgatccaagaacaccttccct 77740
>emb|Z26879.1|SCRPS8SFC S.cerevisiae genes for small subunit ribosomal protein S8, splicing factor, and chaperone Length = 7468 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagcac 311 ||||||||||||||||||||| Sbjct: 2220 gatgacgaggatgatgagcac 2200
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatgg 328 |||||||| || ||||||||| |||| || ||||||||||| Sbjct: 1398660 gacgatgatgacgatgatgagaacgaagaggttgatgatgg 1398620
>gb|BC075037.2| Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1, mRNA (cDNA clone MGC:104011 IMAGE:30915422), complete cds Length = 1691 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgag 308 ||||||||||||||||||||| Sbjct: 219 gacgatgacgaggatgatgag 239
>gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, complete sequence Length = 148824 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgag 308 ||||||||||||||||||||| Sbjct: 19955 gacgatgacgaggatgatgag 19975
>ref|NM_001027854.1| Caenorhabditis elegans GRound-Like (grd related) family member (grl-25) (grl-25) mRNA, complete cds Length = 2394 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 gacgaggatgatgagcacgacgatg 318 |||||||||||||||| |||||||| Sbjct: 1223 gacgaggatgatgagctcgacgatg 1199
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 359 ccaggacgccagccttgcacgagtcgcac 387 |||| ||||| |||||||||||||||||| Sbjct: 43178380 ccagcacgccggccttgcacgagtcgcac 43178352
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 359 ccaggacgccagccttgcacgagtcgcac 387 |||| ||||| |||||||||||||||||| Sbjct: 65835 ccagcacgccggccttgcacgagtcgcac 65807
>dbj|AB198191.1| Homo sapiens KCNN1 mRNA for small-conductance calcium-activated potassium channel, complete cds Length = 1629 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgag 308 ||||||||||||||||||||| Sbjct: 253 gacgatgacgaggatgatgag 273
>gb|U69883.2|HSU69883 Homo sapiens small-conductance, calcium-activated potassium channel SK1 (KCNN1) mRNA, complete cds Length = 2535 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgag 308 ||||||||||||||||||||| Sbjct: 519 gacgatgacgaggatgatgag 539
>gb|AF131940.1|HSKCNN03 Homo sapiens small-conductance calcium-activated potassium channel 1 (KCNN1) gene, exon 3 Length = 1481 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgag 308 ||||||||||||||||||||| Sbjct: 711 gacgatgacgaggatgatgag 731
>emb|Z35835.1|SCYBL074C S.cerevisiae chromosome II reading frame ORF YBL074c Length = 2077 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagcac 311 ||||||||||||||||||||| Sbjct: 336 gatgacgaggatgatgagcac 316
>gb|DQ331554.1| Synthetic construct Saccharomyces cerevisiae clone FLH202157.01X AAR2 gene, complete sequence Length = 1068 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 gatgacgaggatgatgagcac 311 ||||||||||||||||||||| Sbjct: 1006 gatgacgaggatgatgagcac 1026
>gb|M36115.1|YSCSSA3A S.cerevisiae heat shock protein gene (SSA3) Length = 1220 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 gatgacgaggatgatgagcac 311 ||||||||||||||||||||| Sbjct: 780 gatgacgaggatgatgagcac 800
>dbj|D90455.1|YSCAAR2 Saccharomyces cerevisiae AAR2 gene, complete cds Length = 2652 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 gatgacgaggatgatgagcac 311 ||||||||||||||||||||| Sbjct: 1702 gatgacgaggatgatgagcac 1722
>ref|NM_120401.2| Arabidopsis thaliana unknown protein AT5G03230 mRNA, complete cds Length = 872 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 438 gacgatgacgaggatgatga 457
>ref|XM_477391.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1595 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 252 cttggcgttgcggaacgcggcgcagccggcga 283 ||||||| ||||| ||||||||||||||||| Sbjct: 642 cttggcgaggcggagcgcggcgcagccggcga 611
>ref|NM_186227.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 275 agccggcgacgtagacgatgacgaggatgatgagca 310 ||||||||||||||||| |||||||| ||| |||| Sbjct: 1216 agccggcgacgtagacggcgacgaggacgatcagca 1181
>ref|XM_367686.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07597.4) partial mRNA Length = 1569 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 ggcgacgtagacgatgacga 298 |||||||||||||||||||| Sbjct: 1311 ggcgacgtagacgatgacga 1292
>ref|XM_958446.1| Neurospora crassa OR74A hypothetical protein (NCU06767.1) partial mRNA Length = 3222 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 gtagacgatgacgaggatgatgag 308 ||||| |||||||||||||||||| Sbjct: 3139 gtagatgatgacgaggatgatgag 3162
>ref|XM_327052.1| Neurospora crassa OR74A hypothetical protein (NCU06767.1) partial mRNA Length = 3222 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 gtagacgatgacgaggatgatgag 308 ||||| |||||||||||||||||| Sbjct: 3139 gtagatgatgacgaggatgatgag 3162
>ref|XM_717465.1| Candida albicans SC5314 hypothetical protein (CaO19_1513), mRNA Length = 7875 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| |||| |||| |||||||| Sbjct: 2584 gacgatgacgatgatgatgacgacgatgatgatgatgatg 2623
>ref|XM_717326.1| Candida albicans SC5314 hypothetical protein (CaO19_9088), mRNA Length = 7875 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| |||| |||| |||||||| Sbjct: 2584 gacgatgacgatgatgatgacgacgatgatgatgatgatg 2623
>ref|XM_713283.1| Candida albicans SC5314 UDP-glucose:sterol glucosyltransferase (CaO19_10147), mRNA Length = 4548 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 4423 gacgatgacgaggatgatga 4442
>ref|XM_713188.1| Candida albicans SC5314 UDP-glucose:sterol glucosyltransferase (CaO19_2616), mRNA Length = 4542 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 4417 gacgatgacgaggatgatga 4436
>ref|XM_712857.1| Candida albicans SC5314 hypothetical protein (CaO19_3260), mRNA Length = 2196 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| | ||||||| |||||||| Sbjct: 1858 gacgatgacgatgatgatgatgatgacgatgatgatgatg 1897
>ref|XM_712791.1| Candida albicans SC5314 hypothetical protein (CaO19_10770), mRNA Length = 2196 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| | ||||||| |||||||| Sbjct: 1858 gacgatgacgatgatgatgatgatgacgatgatgatgatg 1897
>gb|AY207493.1| Chlamydomonas reinhardtii CR019 protein gene, complete cds Length = 5216 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 3253 gacgatgacgaggatgatga 3272
>ref|XM_447086.1| Candida glabrata CBS138, CAGL0H06677g partial mRNA Length = 1017 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 295 gacgatgacgaggatgatga 314
>ref|XM_809199.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511389.50) partial mRNA Length = 2604 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 1795 gacgatgacgaggatgatga 1814
>emb|AJ245406.1|DME245406 Drosophila melanogaster partial kettin gene Length = 37107 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 acgatgacgaggatgatgag 308 |||||||||||||||||||| Sbjct: 22781 acgatgacgaggatgatgag 22800
>emb|CR727966.2|CNS0GON8 Tetraodon nigroviridis full-length cDNA Length = 2153 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| ||||| || ||||||||| |||||||| Sbjct: 1397 gacgatgacgatgatgacgacgacgacgatgatgatgatg 1436
>emb|CR726173.2|CNS0GN9F Tetraodon nigroviridis full-length cDNA Length = 1156 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| || ||||| ||||||||| |||||||| Sbjct: 412 gacgatgacgatgacgatgatgacgacgatgatgatgatg 451
>ref|XM_763343.1| Giardia lamblia ATCC 50803 variant-specific surface protein (GLP_251_93_674) partial mRNA Length = 582 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 ccagccttgcacgagtcgcactgg 390 ||||||||||||| |||||||||| Sbjct: 221 ccagccttgcacgtgtcgcactgg 198
>ref|XM_763344.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_251_920_102) partial mRNA Length = 819 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ccagccttgcacgagtcgcactgg 390 ||||||||||||| |||||||||| Sbjct: 608 ccagccttgcacgtgtcgcactgg 631
>gb|AC004965.2| Homo sapiens PAC clone RP5-1106H14 from 7, complete sequence Length = 170758 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 gtacaggcaaaggttttccc 158 |||||||||||||||||||| Sbjct: 65328 gtacaggcaaaggttttccc 65309
>emb|CR693711.1|CNS0FY7V Tetraodon nigroviridis full-length cDNA Length = 1301 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 317 gacgatgacgaggatgatga 298
>ref|XM_791403.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7917-PA (LOC591856), partial mRNA Length = 1188 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 739 gacgatgacgaggatgatga 758
>ref|XM_777440.1| PREDICTED: Strongylocentrotus purpuratus similar to Multiple EGF-like-domain protein 3 (Multiple epidermal growth factor-like domains 6) (LOC577196), mRNA Length = 732 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 664 gacgatgacgaggatgatga 683
>gb|AC123178.4| Rattus norvegicus 7 BAC CH230-20I17 (Children's Hospital Oakland Research Institute) complete sequence Length = 221236 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| || ||||| ||||||||| |||||||| Sbjct: 187927 gacgatgacgatgacgatgacgacgacgatgatgatgatg 187888
>gb|AY142539.1| Arabidopsis thaliana unknown protein (At5g03230) mRNA, complete cds Length = 532 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 316 gacgatgacgaggatgatga 335
>ref|XM_793057.1| PREDICTED: Strongylocentrotus purpuratus similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1) (LOC593587), mRNA Length = 9693 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 282 gacgtagacgatgacgaggatgatgagc 309 |||| ||||||||| ||||||||||||| Sbjct: 5221 gacgaagacgatgaagaggatgatgagc 5248
>ref|XM_780232.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC580159 (LOC580159), mRNA Length = 1902 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 1171 gacgatgacgaggatgatga 1190
>emb|X82641.1|DMMAS1HE D.melanogaster mRNA for alpha 1,2 mannosidase (Berlin) Length = 3717 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gatgacgaggatgatgagca 310 |||||||||||||||||||| Sbjct: 355 gatgacgaggatgatgagca 374
>gb|AF370275.1| Arabidopsis thaliana unknown protein (At5g03230) mRNA, complete cds Length = 892 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 438 gacgatgacgaggatgatga 457
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 663597 gacgatgacgaggatgatga 663616
>emb|BX284751.1|NCB24N11 Neurospora crassa DNA linkage group II BAC contig B24N11 Length = 129306 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 gtagacgatgacgaggatgatgag 308 ||||| |||||||||||||||||| Sbjct: 13707 gtagatgatgacgaggatgatgag 13730
>emb|AL356173.2|NCB14D6 Neurospora crassa DNA linkage group II BAC contig B14D6 Length = 199386 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 gtagacgatgacgaggatgatgag 308 ||||| |||||||||||||||||| Sbjct: 173266 gtagatgatgacgaggatgatgag 173289
>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA project) Length = 99008 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 72963 gacgatgacgaggatgatga 72982
>emb|AJ271740.1|DME271740 Drosophila melanogaster D-Titin gene, exons 1-37 Length = 70398 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 acgatgacgaggatgatgag 308 |||||||||||||||||||| Sbjct: 24537 acgatgacgaggatgatgag 24556
>gb|AC091222.3| Drosophila melanogaster 3L BAC RP98-11G24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 144056 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 acgatgacgaggatgatgag 308 |||||||||||||||||||| Sbjct: 68184 acgatgacgaggatgatgag 68165
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 atgccggccaggacgccagc 371 |||||||||||||||||||| Sbjct: 3580146 atgccggccaggacgccagc 3580165
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tgttgatgatggccaccttg 336 |||||||||||||||||||| Sbjct: 660033 tgttgatgatggccaccttg 660052
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tgttgatgatggccaccttg 336 |||||||||||||||||||| Sbjct: 2093579 tgttgatgatggccaccttg 2093598
>gb|AC023716.4| Drosophila melanogaster X BAC RP98-45E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169124 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagca 310 |||||||||||||||||||| Sbjct: 107546 gatgacgaggatgatgagca 107527
>gb|AC023694.4| Drosophila melanogaster X BAC RP98-18B11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170301 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagca 310 |||||||||||||||||||| Sbjct: 149721 gatgacgaggatgatgagca 149702
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 9732 gacgatgacgaggatgatga 9751
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 94360 gacgatgacgaggatgatga 94379
>gb|AY532399.1| Chorthippus biguttulus clone cDNA2 microsatellite cDNA2a and microsatellite cDNA2b sequences Length = 674 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatgagcacgacgatgttgatgatg 327 ||||||||||| |||||||| |||| |||| |||||||| Sbjct: 265 gacgatgacgacgatgatgacaacgatgatgatgatgatg 304
>gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequence Length = 184338 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tggtcatcctggccatgccg 228 |||||||||||||||||||| Sbjct: 69054 tggtcatcctggccatgccg 69035
>ref|NM_136527.1| Drosophila melanogaster CG14755-RA (CG14755), mRNA Length = 855 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagcacgacgatg 318 |||||||||||||| ||||| ||||||| Sbjct: 437 gatgacgaggatgaggagcaggacgatg 410
>ref|NM_078550.2| Drosophila melanogaster Mannosidase I CG32684-RB, transcript variant B (alpha-Man-I), mRNA Length = 3150 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gatgacgaggatgatgagca 310 |||||||||||||||||||| Sbjct: 355 gatgacgaggatgatgagca 374
>gb|AC008340.5| Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone BACR07J20, complete sequence Length = 181771 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 24486 gacgatgacgaggatgatga 24467
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 cgacgtagacgatgacgaggatgatgag 308 ||||| ||| |||||||||||||||||| Sbjct: 1031008 cgacgaagaagatgacgaggatgatgag 1031035
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tggccaccttgcgccagctc 345 |||||||||||||||||||| Sbjct: 1089177 tggccaccttgcgccagctc 1089196
>gb|AC091388.1|AC091388 Drosophila melanogaster, chromosome 2R, region 44C-44D, BAC clone BACR14B02, complete sequence Length = 194036 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagcacgacgatg 318 |||||||||||||| ||||| ||||||| Sbjct: 113079 gatgacgaggatgaggagcaggacgatg 113052
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 252 cttggcgttgcggaacgcggcgcagccggcga 283 ||||||| ||||| ||||||||||||||||| Sbjct: 10051937 cttggcgaggcggagcgcggcgcagccggcga 10051906 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 275 agccggcgacgtagacgatgacgaggatgatgagca 310 ||||||||||||||||| |||||||| ||| |||| Sbjct: 1702921 agccggcgacgtagacggcgacgaggacgatcagca 1702886 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 275 agccggcgacgtagacgatgacgaggatgatgagca 310 ||||||||||||||||| |||||||| ||| |||| Sbjct: 1670213 agccggcgacgtagacggcgacgaggacgatcagca 1670178
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 280 gcgacgtagacgatgacgaggatgatgagcacgacg 315 ||||||||||||| ||||||| || |||||||||| Sbjct: 10717380 gcgacgtagacgacgacgagggagacgagcacgacg 10717415
>ref|XM_233838.3| PREDICTED: Rattus norvegicus similar to AI115348 protein (predicted) (LOC313860), mRNA Length = 2254 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 cgttgcggaacgcggcgcagccgg 280 ||||||||| |||||||||||||| Sbjct: 427 cgttgcggagcgcggcgcagccgg 404
>dbj|AP003522.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036B02 Length = 168253 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 280 gcgacgtagacgatgacgaggatgatgagcacgacg 315 ||||||||||||| ||||||| || |||||||||| Sbjct: 70443 gcgacgtagacgacgacgagggagacgagcacgacg 70478
>dbj|AP004014.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1606_D04 Length = 92729 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 275 agccggcgacgtagacgatgacgaggatgatgagca 310 ||||||||||||||||| |||||||| ||| |||| Sbjct: 45121 agccggcgacgtagacggcgacgaggacgatcagca 45086 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 275 agccggcgacgtagacgatgacgaggatgatgagca 310 ||||||||||||||||| |||||||| ||| |||| Sbjct: 12413 agccggcgacgtagacggcgacgaggacgatcagca 12378
>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0088O14 Length = 179483 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 275 agccggcgacgtagacgatgacgaggatgatgagca 310 ||||||||||||||||| |||||||| ||| |||| Sbjct: 171576 agccggcgacgtagacggcgacgaggacgatcagca 171541 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 275 agccggcgacgtagacgatgacgaggatgatgagca 310 ||||||||||||||||| |||||||| ||| |||| Sbjct: 138868 agccggcgacgtagacggcgacgaggacgatcagca 138833
>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01 Length = 130152 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 252 cttggcgttgcggaacgcggcgcagccggcga 283 ||||||| ||||| ||||||||||||||||| Sbjct: 24613 cttggcgaggcggagcgcggcgcagccggcga 24582
>dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 Length = 80770 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 44102 gacgatgacgaggatgatga 44121
>gb|AF216973.1|AF216973 Drosophila melanogaster l(2)01289 gene, complete cds, alternatively spliced products Length = 20796 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 10587 gacgatgacgaggatgatga 10606
>dbj|AK109558.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-E09, full insert sequence Length = 1595 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 252 cttggcgttgcggaacgcggcgcagccggcga 283 ||||||| ||||| ||||||||||||||||| Sbjct: 642 cttggcgaggcggagcgcggcgcagccggcga 611
>ref|NM_209636.1| Eremothecium gossypii ADR187Wp (ADR187W), mRNA Length = 2880 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 cgacgtagacgatgacgaggatgatgag 308 ||||| ||| |||||||||||||||||| Sbjct: 282 cgacgaagaagatgacgaggatgatgag 309
>dbj|AK068296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149H14, full insert sequence Length = 1919 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 275 agccggcgacgtagacgatgacgaggatgatgagca 310 ||||||||||||||||| |||||||| ||| |||| Sbjct: 1367 agccggcgacgtagacggcgacgaggacgatcagca 1332
>dbj|AP003797.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1001_C01 Length = 90750 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 252 cttggcgttgcggaacgcggcgcagccggcga 283 ||||||| ||||| ||||||||||||||||| Sbjct: 83586 cttggcgaggcggagcgcggcgcagccggcga 83555
>gb|AY508229.1| Sodalis glossinidius symbiosis island 2, complete sequence Length = 28000 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 atgccggccaggacgccagc 371 |||||||||||||||||||| Sbjct: 26991 atgccggccaggacgccagc 26972
>gb|AF091398.1|AF091398 Candida albicans UDP-glucose:sterol glucosyltransferase (UGT51C1) gene, complete cds Length = 4935 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 4470 gacgatgacgaggatgatga 4489
>gb|AF065168.1|AF065168 Giardia intestinalis variant-specific surface protein 417-4 (vsp417-4) gene, complete cds Length = 2740 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 ccagccttgcacgagtcgcactgg 390 ||||||||||||| |||||||||| Sbjct: 2241 ccagccttgcacgtgtcgcactgg 2218
>gb|U89153.1|GIU89153 Giardia intestinalis variant-specific surface protein type 4 tsp11/tsa417-like (vsp417-4) gene, partial cds Length = 690 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 ccagccttgcacgagtcgcactgg 390 ||||||||||||| |||||||||| Sbjct: 344 ccagccttgcacgtgtcgcactgg 321
>gb|AE003837.3| Drosophila melanogaster chromosome 2R, section 13 of 73 of the complete sequence Length = 265215 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagcacgacgatg 318 |||||||||||||| ||||| ||||||| Sbjct: 78636 gatgacgaggatgaggagcaggacgatg 78609
>gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 of 73 of the complete sequence Length = 348873 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 60697 gacgatgacgaggatgatga 60678
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 acgatgacgaggatgatgag 308 |||||||||||||||||||| Sbjct: 250147 acgatgacgaggatgatgag 250128
>gb|AE003450.4| Drosophila melanogaster chromosome X, section 34 of 74 of the complete sequence Length = 232514 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagca 310 |||||||||||||||||||| Sbjct: 32407 gatgacgaggatgatgagca 32388
>gb|AC006421.1|AC006421 Drosophila melanogaster, chromosome 2R, region 44C1-44C5, P1 clones DS08614 and DS00667, complete sequence Length = 100575 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 291 gatgacgaggatgatgagcacgacgatg 318 |||||||||||||| ||||| ||||||| Sbjct: 28024 gatgacgaggatgaggagcaggacgatg 27997
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 caccaccacccacaacgagtggcc 134 ||||||||||||||||| |||||| Sbjct: 1428923 caccaccacccacaacgtgtggcc 1428946
>gb|DQ332585.1| Synthetic construct Saccharomyces cerevisiae clone FLH202938.01X NMD2 gene, complete sequence Length = 3383 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 2790 gacgatgacgaggatgatga 2809
>gb|U10556.1|YSCH9205 Saccharomyces cerevisiae chromosome VIII cosmid 9205 Length = 39203 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 14097 gacgatgacgaggatgatga 14078
>gb|U76750.1|LPU76750 Lytechinus pictus mitotic apparatus protein p62 mRNA, complete cds Length = 3374 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 909 gacgatgacgaggatgatga 928
>gb|U28158.1|SCU28158 Saccharomyces cerevisiae Ifs1p (IFS1) gene, complete cds Length = 4883 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 2693 gacgatgacgaggatgatga 2712
>gb|U14974.1|SCU14974 Saccharomyces cerevisiae Nmd2p (NMD2) gene, complete cds Length = 4080 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 3151 gacgatgacgaggatgatga 3170
>gb|U12137.1|SCU12137 Saccharomyces cerevisiae Upf2p (UPF2) gene, complete cds Length = 5015 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gacgatgacgaggatgatga 307 |||||||||||||||||||| Sbjct: 3970 gacgatgacgaggatgatga 3989 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,155,525 Number of Sequences: 3902068 Number of extensions: 3155525 Number of successful extensions: 65666 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64932 Number of HSP's gapped (non-prelim): 732 length of query: 480 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 458 effective length of database: 17,147,199,772 effective search space: 7853417495576 effective search space used: 7853417495576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
