Clone Information

BLAST Search Result

Clone Name	rbart06h09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Y5621_ARATH (O81488) PHD finger protein At5g26210	82	4e-16
2	CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC do...	46	3e-05
3	CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC do...	46	3e-05
4	DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-...	45	7e-05
5	DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-...	45	7e-05
6	ATX3_ARATH (Q9M364) Histone-lysine N-methyltransferase ATX3 (EC ...	44	2e-04
7	PHF8_MOUSE (Q80TJ7) PHD finger protein 8	42	6e-04
8	K1718_MOUSE (Q3UWM4) Protein KIAA1718	42	6e-04
9	PHF8_HUMAN (Q9UPP1) PHD finger protein 8	42	6e-04
10	PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)	41	0.001
11	PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)	41	0.001
12	MSC1_SCHPO (Q9UT79) Multicopy suppressor of chk1 protein 1	41	0.001
13	K1718_HUMAN (Q6ZMT4) Protein KIAA1718	40	0.002
14	SPP1_SCHPO (O74508) Set1 complex component spp1 (Set1C component...	40	0.002
15	LID2_SCHPO (Q9HDV4) Lid2 complex component lid2 (Lid2C component...	38	0.008
16	JHD1_DEBHA (Q6BXJ4) JmjC domain-containing histone demethylation...	38	0.008
17	JHD1_CANAL (Q5A847) JmjC domain-containing histone demethylation...	35	0.054
18	JHD1_YARLI (Q6C423) JmjC domain-containing histone demethylation...	35	0.054
19	PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) ...	34	0.16
20	JHD1_YEAST (P40034) JmjC domain-containing histone demethylation...	33	0.20
21	PHF3_HUMAN (Q92576) PHD finger protein 3	33	0.27
22	YNG2_CANAL (Q5AHB8) Chromatin modification-related protein YNG2 ...	33	0.27
23	ATXR5_ARATH (Q8VZJ1) Histone-lysine N-methyltransferase ATXR5 (E...	33	0.35
24	ZMY11_MOUSE (Q8R5C8) Zinc finger MYND domain-containing protein 11	32	0.59
25	SPP1_YEAST (Q03012) COMPASS component SPP1 (Complex proteins ass...	31	1.0
26	PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE ...	31	1.0
27	TCF19_PIG (Q9TSV4) Transcription factor 19 (Transcription factor...	31	1.0
28	CTI6_YEAST (Q08923) Transcriptional regulatory protein CTI6 (CYC...	31	1.0
29	JAD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (...	31	1.3
30	YCHD_SCHPO (Q9Y7V2) Protein C645.13 in chromosome III	31	1.3
31	TCF19_PANTR (Q7YR48) Transcription factor 19 (Transcription fact...	30	1.7
32	TCF19_MACMU (Q5TM48) Transcription factor 19	30	1.7
33	TCF19_HUMAN (Q9Y242) Transcription factor 19 (Transcription fact...	30	1.7
34	JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (...	30	1.7
35	JAD1C_MOUSE (P41230) Jumonji/ARID domain-containing protein 1C (...	30	1.7
36	JAD1D_PANTR (Q5XUN4) Jumonji/ARID domain-containing protein 1D (...	30	1.7
37	JAD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (...	30	1.7
38	ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC ...	30	2.3
39	PHF7_HUMAN (Q9BWX1) PHD finger protein 7 (Protein NYD-SP6)	30	2.3
40	HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-li...	30	2.3
41	Y1342_ARATH (Q9C810) PHD finger protein At1g33420	30	2.9
42	CYC02_CATRO (P25923) CYC02 protein	30	2.9
43	SYR_CHLPN (Q9Z7Y3) Arginyl-tRNA synthetase (EC 6.1.1.19) (Argini...	30	2.9
44	MLO2_SCHPO (Q09329) Protein mlo2	29	3.8
45	SET3_SCHPO (Q10362) SET domain-containing protein 3	29	3.8
46	PHF7_RAT (Q6AXW4) PHD finger protein 7	29	3.8
47	JAD1A_HUMAN (P29375) Jumonji/ARID domain-containing protein 1A (...	29	3.8
48	PHF7_MOUSE (Q9DAG9) PHD finger protein 7 (Protein NYD-SP6)	29	3.8
49	AP1M2_HUMAN (Q9Y6Q5) AP-1 complex subunit mu-2 (Adaptor-related ...	29	3.8
50	AP1M2_MOUSE (Q9WVP1) AP-1 complex subunit mu-2 (Adaptor-related ...	29	5.0
51	LY10_HUMAN (Q13342) Nuclear body protein SP140 (Nuclear autoanti...	28	8.6
52	ZMY11_HUMAN (Q15326) Zinc finger MYND domain-containing protein ...	28	8.6
53	SYR_CHLTR (O84460) Arginyl-tRNA synthetase (EC 6.1.1.19) (Argini...	28	8.6
54	I22RA_MOUSE (Q80XF5) Interleukin-22 receptor alpha-2 chain precu...	28	8.6

>Y5621_ARATH (O81488) PHD finger protein At5g26210|
          Length = 255

 Score = 82.4 bits (202), Expect = 4e-16
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = -2

Query: 415 CCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRAR 302
           CCD CE W+HGKCVKITPARAEHIK YKCP CSNKRAR
Sbjct: 217 CCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 254

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>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 656

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNK 311
           CDNC  W+HG C++IT   A+ I+ + C +C  K
Sbjct: 43  CDNCNEWFHGDCIRITEKMAKAIREWYCRECREK 76

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>CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 660

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNK 311
           CDNC  W+HG C++IT   A+ I+ + C +C  K
Sbjct: 43  CDNCNEWFHGDCIRITEKMAKAIREWYCRECREK 76

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>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated|
           transcription factor 1) (DATF-1) (hDido1)
          Length = 2240

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = -2

Query: 415 CCDNCERWYHGKCVKITPARAEHIKH----YKCPDCS 317
           CCD CE W+HG CV I+ AR   ++     Y CP+C+
Sbjct: 284 CCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 320

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>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated|
           transcription factor 1) (DATF-1) (Fragments)
          Length = 1956

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = -2

Query: 415 CCDNCERWYHGKCVKITPARAEHIKH----YKCPDCS 317
           CCD CE W+HG CV I+ AR   ++     Y CP+C+
Sbjct: 281 CCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 317

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>ATX3_ARATH (Q9M364) Histone-lysine N-methyltransferase ATX3 (EC 2.1.1.43)|
           (Trithorax-homolog protein 3) (TRX-homolog protein 3)
           (Protein SET DOMAIN GROUP 14)
          Length = 902

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -2

Query: 415 CCDNCERWYHGKCVKITPARAEHIKH--YKCPDC 320
           CCD C+ W H +C  IT  R + ++H  Y CPDC
Sbjct: 368 CCDGCDVWVHAECDNITNERFKELEHNNYYCPDC 401

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>PHF8_MOUSE (Q80TJ7) PHD finger protein 8|
          Length = 1023

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
           CD C+ W+HG CV +   +A  I  Y CP+C
Sbjct: 23  CDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53

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>K1718_MOUSE (Q3UWM4) Protein KIAA1718|
          Length = 940

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCS 317
           CD C+ W+HG CV +    A  I  Y CPDC+
Sbjct: 55  CDVCKDWFHGSCVGVEEHHAVDIDLYHCPDCA 86

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>PHF8_HUMAN (Q9UPP1) PHD finger protein 8|
          Length = 1060

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
           CD C+ W+HG CV +   +A  I  Y CP+C
Sbjct: 59  CDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 89

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>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)|
          Length = 1101

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRAR 302
           CD C+ W+HG CV +    A  I  Y CP+C     +
Sbjct: 23  CDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGK 59

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>PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)|
          Length = 1096

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRAR 302
           CD C+ W+HG CV +    A  I  Y CP+C     +
Sbjct: 23  CDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGK 59

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>MSC1_SCHPO (Q9UT79) Multicopy suppressor of chk1 protein 1|
          Length = 1588

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV 299
            C NC  W+H +CV ++      + +Y CPDC +K  ++
Sbjct: 1472 CHNCLEWFHYECVGLSSDIVSTLSNYACPDCCSKEGKL 1509



 Score = 37.0 bits (84), Expect = 0.018
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQKAPARLQ 266
            C+ C  WYH KC+K++  +    + + CP C + R  V R    P  ++
Sbjct: 1187 CELCHEWYHAKCMKMSKKKLRADEKFICPIC-DYRVEVPRHSHRPPLIE 1234

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>K1718_HUMAN (Q6ZMT4) Protein KIAA1718|
          Length = 941

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCS 317
           CD C+ W+HG CV +    A  I  Y CP+C+
Sbjct: 55  CDICKDWFHGSCVGVEEHHAVDIDLYHCPNCA 86

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>SPP1_SCHPO (O74508) Set1 complex component spp1 (Set1C component spp1)|
           (COMPASS component spp1) (Complex proteins associated
           with set1 protein spp1)
          Length = 424

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNK 311
           CD CE W+HG CV I  +  +    Y CP C+ +
Sbjct: 135 CDGCEDWFHGTCVNIPESYNDLTVQYFCPKCTEE 168

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>LID2_SCHPO (Q9HDV4) Lid2 complex component lid2 (Lid2C component lid2)|
          Length = 1513

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQKAPARLQD 263
            C+ C  WYH KC+K++  +    + + CP C + R  + R    P +L+D
Sbjct: 1112 CEICHEWYHAKCLKMSKKKLRQDEKFTCPIC-DYRVEIPRLSNRP-KLED 1159



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
            C  CER +H  CV +    A+ +  + CP C
Sbjct: 1370 CTICERRFHYDCVGLNNEIADSVSKFTCPIC 1400

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>JHD1_DEBHA (Q6BXJ4) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 514

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCS 317
           CD C +W+H  C+KI      ++  Y C  CS
Sbjct: 29  CDICNQWFHASCLKIPKIEVNNLHSYHCEGCS 60

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>JHD1_CANAL (Q5A847) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 478

 Score = 35.4 bits (80), Expect = 0.054
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 11/49 (22%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDC-----------SNKRARV 299
           C  C+ WYH  C+ +     + I  Y CP+C            +KRARV
Sbjct: 35  CSKCKVWYHVHCLDLPTDEIDQIVIYHCPECVPKYGESTYKRKSKRARV 83

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>JHD1_YARLI (Q6C423) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 510

 Score = 35.4 bits (80), Expect = 0.054
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKR 308
           CD C+RW H  CV IT   +     Y CP C+  +
Sbjct: 22  CDGCDRWVHDVCVSITDPVS--YAKYHCPTCTKTK 54

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>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous|
           T-cell lymphoma associated antigen se14-3) (CTCL tumor
           antigen se14-3) (Zinc finger MYND domain containing
           protein 8)
          Length = 1186

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 415 CCDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
           CC+ C R YH KC+++T   +E    + CP+C
Sbjct: 102 CCELCPRVYHAKCLRLT---SEPEGDWFCPEC 130

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>JHD1_YEAST (P40034) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-) (ScJHDM1)
          Length = 492

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 15/45 (33%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKIT---------------PARAEHIKHYKCPD 323
           CD+C +W H KCV +                P  A+ IK Y+CP+
Sbjct: 24  CDSCPQWVHVKCVPLKRIHYSNLTSSEVLSYPNSAKQIKSYRCPN 68

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>PHF3_HUMAN (Q92576) PHD finger protein 3|
          Length = 2039

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHI----KHYKCPDC 320
           C  C+ W+HG CV ++ ++A+ +    K Y C  C
Sbjct: 735 CGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKC 769

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>YNG2_CANAL (Q5AHB8) Chromatin modification-related protein YNG2 (ING1 homolog|
           2)
          Length = 298

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
 Frame = -2

Query: 412 CDN--CE-RWYHGKCVKIT-PARAEHIKHYKCPDCSNKRARV*RRQK 284
           CDN  C+  W+H  CV IT P + + I  + CPDC++K  +  +++K
Sbjct: 253 CDNEDCKYEWFHWSCVGITSPPKDDEI--WYCPDCASKMEKRKKKRK 297

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>ATXR5_ARATH (Q8VZJ1) Histone-lysine N-methyltransferase ATXR5 (EC 2.1.1.43)|
           (Trithorax-related protein 5) (TRX-related protein 5)
           (Protein SET DOMAIN GROUP 15)
          Length = 352

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKR 308
           CD C+R +H KC++    R   I  + C DCS++R
Sbjct: 82  CDKCDRGFHMKCLRPIVVRVP-IGTWLCVDCSDQR 115

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>ZMY11_MOUSE (Q8R5C8) Zinc finger MYND domain-containing protein 11|
          Length = 562

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQK 284
           CD C R YH KC+       +   H++CP C + + +   +Q+
Sbjct: 75  CDLCFRVYHSKCLSDEFRLRDSSSHWQCPVCRSIKKKHSNKQE 117

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>SPP1_YEAST (Q03012) COMPASS component SPP1 (Complex proteins associated with|
           SET1 protein SPP1) (Set1C component SPP1) (Suppressor of
           PRP protein 1)
          Length = 353

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
           CD C+ W+H  C+ I     + +  + CP C
Sbjct: 39  CDGCDDWFHFTCLHIPEQFKDLVFSFYCPYC 69

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>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)|
           (Protein GYMNOS)
          Length = 1384

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
           C+ C   +H KC+ + P +   +++++CP+C
Sbjct: 64  CNTCTYAFHAKCL-VPPLKDASVENWRCPEC 93

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>TCF19_PIG (Q9TSV4) Transcription factor 19 (Transcription factor SC1)|
          Length = 346

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
           CD C+ W+H  CV  +   A+    ++CP C
Sbjct: 311 CDGCDTWFHVACVGCSIQAAKE-ADFRCPGC 340

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>CTI6_YEAST (Q08923) Transcriptional regulatory protein CTI6|
           (CYC8-TUP1-interacting protein 6)
          Length = 506

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
           C+ C  W HG CV IT   A     Y C  C
Sbjct: 92  CEQCSSWQHGYCVSITQDNAP--DKYWCEQC 120

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>JAD1C_HUMAN (P41229) Jumonji/ARID domain-containing protein 1C (SmcX protein)|
            (Xe169 protein)
          Length = 1560

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 23/75 (30%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKI-------------TPARA--EHIKHYKCPDCSNKR--------AR 302
            CD C+ W+HG+CV +             +P  A  E    + CP C   R        A 
Sbjct: 1202 CDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILAL 1261

Query: 301  V*RRQKAPARLQDSE 257
            +   Q+ P RL + E
Sbjct: 1262 LVALQRLPVRLPEGE 1276

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>YCHD_SCHPO (Q9Y7V2) Protein C645.13 in chromosome III|
          Length = 721

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQKAPARLQDSEWN*HQHQI 233
           CD C+ W H  CV +  A  +  + Y C  C +       R    +++Q+S     +HQ 
Sbjct: 38  CDGCDCWQHASCVGL--ADKDIPESYYCEVCHS-------RSDVSSQVQNSPNKDEEHQT 88

Query: 232 VDVRRS 215
            D+  S
Sbjct: 89  ADLLAS 94

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>TCF19_PANTR (Q7YR48) Transcription factor 19 (Transcription factor SC1)|
          Length = 345

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
           CD C+ W+H  CV  +  +A     ++CP C
Sbjct: 310 CDGCDVWFHVACVGCS-IQAAREADFRCPGC 339

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>TCF19_MACMU (Q5TM48) Transcription factor 19|
          Length = 345

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
           CD C+ W+H  CV  +  +A     ++CP C
Sbjct: 310 CDGCDVWFHVACVGCS-IQAAREADFRCPGC 339

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>TCF19_HUMAN (Q9Y242) Transcription factor 19 (Transcription factor SC1)|
          Length = 345

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDC 320
           CD C+ W+H  CV  +  +A     ++CP C
Sbjct: 310 CDGCDVWFHVACVGCS-IQAAREADFRCPGC 339

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>JAD1D_MOUSE (Q62240) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
            (Histocompatibility Y antigen) (H-Y)
          Length = 1548

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 15/50 (30%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKI----TPARAEHIK-----------HYKCPDCSNKR 308
            CD C  W+HG+CV +    +  RA H              + CP C   R
Sbjct: 1197 CDLCHDWFHGQCVTVPHLLSSVRASHTSSQLLAWWEWDTKFLCPLCMRSR 1246

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>JAD1C_MOUSE (P41230) Jumonji/ARID domain-containing protein 1C (SmcX protein)|
            (Xe169 protein)
          Length = 1554

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 23/75 (30%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKI-------------TPARA--EHIKHYKCPDCSNKR--------AR 302
            CD C+ W+HG+CV +             +P  A  E    + CP C   R        A 
Sbjct: 1202 CDLCQDWFHGRCVTVPRLLSSQRSSLPSSPLLAWWEWDTKFLCPLCMRSRRPRLETILAL 1261

Query: 301  V*RRQKAPARLQDSE 257
            +   Q+ P RL + E
Sbjct: 1262 LVALQRLPVRLPEGE 1276

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>JAD1D_PANTR (Q5XUN4) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
          Length = 1535

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 23/75 (30%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKI-------------TPARA--EHIKHYKCPDCSNKR--------AR 302
            CD C+ W+HG+CV +             +P  A  E    + CP C   R        A 
Sbjct: 1189 CDLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILAL 1248

Query: 301  V*RRQKAPARLQDSE 257
            +   Q+ P RL + E
Sbjct: 1249 LVALQRLPVRLPEGE 1263

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>JAD1D_HUMAN (Q9BY66) Jumonji/ARID domain-containing protein 1D (SmcY protein)|
            (Histocompatibility Y antigen) (H-Y)
          Length = 1539

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 23/75 (30%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKI-------------TPARA--EHIKHYKCPDCSNKR--------AR 302
            CD C+ W+HG+CV +             +P  A  E    + CP C   R        A 
Sbjct: 1189 CDLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILAL 1248

Query: 301  V*RRQKAPARLQDSE 257
            +   Q+ P RL + E
Sbjct: 1249 LVALQRLPVRLPEGE 1263

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>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)|
           (Trithorax-homolog protein 5) (TRX-homolog protein 5)
           (Protein SET DOMAIN GROUP 29)
          Length = 1043

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHI--KHYKCPDCSNK 311
           CD C+ W H  C +I+    + +    Y CP C  K
Sbjct: 434 CDGCKVWIHSACDQISHKHFKDLGETDYYCPTCRTK 469

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>PHF7_HUMAN (Q9BWX1) PHD finger protein 7 (Protein NYD-SP6)|
          Length = 381

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 415 CCDNCERWYHGKCV-KITPARAEHIKHYKCPDCSNKR 308
           CC   +  YH KC+ K     A+H   +KCP C+N++
Sbjct: 179 CCS--QAIYHRKCIQKYAHTSAKHF--FKCPQCNNRK 211

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>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)|
          Length = 3969

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKITPARAEHIKH------YKCPDCSNK 311
            C  C+RW H KC  ++    E + +      Y C +C+ +
Sbjct: 1588 CGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 1627

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>Y1342_ARATH (Q9C810) PHD finger protein At1g33420|
          Length = 697

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKH--YKCPDCSNKRARV*RRQKAPARL 269
           CD C  W+H +C+ I  A A   K   ++C +  +K+ +  ++++  +++
Sbjct: 621 CDGCGVWHHTRCIGINNADALPSKFLCFRCIELYSKKPKQSKKERGSSQV 670

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>CYC02_CATRO (P25923) CYC02 protein|
          Length = 101

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 415 CCDNCERWYHGKCVKITPA 359
           C   C RW+HG+C++  P+
Sbjct: 82  CRHGCCRWFHGRCIRCCPS 100

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>SYR_CHLPN (Q9Z7Y3) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 561

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -2

Query: 406 NCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQKAPARLQDS 260
           N E W      +ITP+  EH  HY+C D + K ARV   +KAP  + ++
Sbjct: 22  NLEDW----APEITPSTKEHFGHYQCND-AMKLARV--LKKAPRAIAEA 63

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>MLO2_SCHPO (Q09329) Protein mlo2|
          Length = 329

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
 Frame = -2

Query: 412 CDNCERWYHGKCVK-----ITPARAEHIKHYKCPDCSNK 311
           C  CE W+H KC++     I    AE  +   C +CS K
Sbjct: 141 CILCEDWFHEKCLQKTNKGIAIPDAETFEWLVCSECSEK 179

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>SET3_SCHPO (Q10362) SET domain-containing protein 3|
          Length = 859

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQKAP-ARLQDSEWN*HQHQ 236
           C++CE W H  CV I        + Y C  C  +     +  K   ARLQ  E    Q +
Sbjct: 20  CESCEVWQHAVCVNIDANNVP--EKYFCEQCQPRPIDADKAHKIQLARLQREE---EQSR 74

Query: 235 IVDVRRS 215
           I+   RS
Sbjct: 75  ILSRSRS 81

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>PHF7_RAT (Q6AXW4) PHD finger protein 7|
          Length = 380

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 415 CCDNCERWYHGKCV-KITPARAEHIKHYKCPDCSNK 311
           CC   +  YH KC+ K     A+H   +KCP C+N+
Sbjct: 178 CCS--QAIYHRKCIQKYAHTSAKHF--FKCPQCNNR 209

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>JAD1A_HUMAN (P29375) Jumonji/ARID domain-containing protein 1A|
            (Retinoblastoma-binding protein 2) (RBBP-2)
          Length = 1722

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 17/69 (24%)
 Frame = -2

Query: 412  CDNCERWYHGKCVKITPA---------RAEHIKHYKCPDCSNKR--------ARV*RRQK 284
            C+ C+ W+H  CV +  +         +A+ +K + CP C   R        + +   QK
Sbjct: 1177 CELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVK-FLCPLCMRSRRPRLETILSLLVSLQK 1235

Query: 283  APARLQDSE 257
             P RL + E
Sbjct: 1236 LPVRLPEGE 1244

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>PHF7_MOUSE (Q9DAG9) PHD finger protein 7 (Protein NYD-SP6)|
          Length = 307

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 415 CCDNCERWYHGKCV-KITPARAEHIKHYKCPDCSNK 311
           CC   +  YH KC+ K     A+H   +KCP C+N+
Sbjct: 179 CCS--QAIYHRKCIQKYAHTSAKHF--FKCPQCNNR 210

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>AP1M2_HUMAN (Q9Y6Q5) AP-1 complex subunit mu-2 (Adaptor-related protein complex|
           1 mu-2 subunit) (Mu-adaptin 2) (Adaptor protein complex
           AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2
           subunit) (Clathrin assembly protein assembly protein
           complex 1
          Length = 423

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +2

Query: 68  SKLVQHYYTNQPTV*NTHKSRVGPT*TN 151
           SK++Q Y T Q     T KSRV PT TN
Sbjct: 128 SKILQEYITQQSNKLETGKSRVPPTVTN 155

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>AP1M2_MOUSE (Q9WVP1) AP-1 complex subunit mu-2 (Adaptor-related protein complex|
           1 mu-2 subunit) (Mu-adaptin 2) (Adaptor protein complex
           AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2
           subunit) (Clathrin assembly protein assembly protein
           complex 1
          Length = 423

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +2

Query: 68  SKLVQHYYTNQPTV*NTHKSRVGPT*TN 151
           SK++Q Y T Q     T KSRV PT TN
Sbjct: 128 SKILQEYITQQGNKLETGKSRVPPTVTN 155

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>LY10_HUMAN (Q13342) Nuclear body protein SP140 (Nuclear autoantigen Sp-140)|
           (Speckled 140 kDa) (LYSp100 protein)
           (Lymphoid-restricted homolog of Sp100)
          Length = 882

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -2

Query: 415 CCDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRA 305
           CCD C R +H  C  I P  AE    + C  C  K +
Sbjct: 704 CCDTCSRVFHEDC-HIPPVEAERTP-WNCIFCRMKES 738

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>ZMY11_HUMAN (Q15326) Zinc finger MYND domain-containing protein 11 (Adenovirus|
           5 E1A-binding protein) (BS69 protein)
          Length = 562

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -2

Query: 412 CDNCERWYHGKCVKITPARAEHIKHYKCPDCSNKRARV*RRQK 284
           CD C R YH KC+       +    ++CP C + + +   +Q+
Sbjct: 75  CDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQE 117

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>SYR_CHLTR (O84460) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 563

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -2

Query: 370 ITPARAEHIKHYKCPDCSNKRARV*RRQKAPARLQDS 260
           ITP+  EH  HY+C D + K ARV    K+P  + +S
Sbjct: 30  ITPSTKEHFGHYQCND-AMKLARV--LHKSPRAIAES 63

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>I22RA_MOUSE (Q80XF5) Interleukin-22 receptor alpha-2 chain precursor|
           (IL-22R-alpha-2) (Interleukin 22-binding protein)
           (IL22BP) (Cytokine receptor family type 2, soluble 1)
           (CRF2-S1)
          Length = 230

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -2

Query: 166 QWNPAVRSCWSDS*LVCVLNRWLVGVVVLYQLRSLQRTCQRRSSTERTRKLTP 8
           QW   V  CW  + L C L    +    LY  R +     R S+  RT + TP
Sbjct: 70  QWEDKV-DCWGTTALFCDLTNETLDPYELYYGRVMTACAGRHSAWTRTPRFTP 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,241,614
Number of Sequences: 219361
Number of extensions: 894681
Number of successful extensions: 2629
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 2501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2629
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result