ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart06h09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108533.1| Zea mays PCO147142 mRNA sequence Length = 1128 Score = 131 bits (66), Expect = 2e-27 Identities = 90/98 (91%) Strand = Plus / Minus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 ||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 856 gccctcttgttgctgcaatctgggcatttgtagtgcttgatgtgctcagctcgtgcaggc 797 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgca 403 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 796 gtgatcttgacacacttcccatggtaccaccgctcgca 759
>ref|NM_190195.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 809 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 750 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 749 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgca 703
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 117 bits (59), Expect = 3e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 301 ccctcgccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgag 360 |||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 74272 cccttgccctcttgttgccgcaatctgggcacttgtagtgtttgatatgctcggctcgag 74213 Query: 361 caggcgtgatcttgacgcatttcccatgataccaacgctcgca 403 |||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct: 74212 caggtgtgatcttcacgcactttccatggtaccaccgctcgca 74170
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 117 bits (59), Expect = 3e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 301 ccctcgccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgag 360 |||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 20402527 cccttgccctcttgttgccgcaatctgggcacttgtagtgtttgatatgctcggctcgag 20402468 Query: 361 caggcgtgatcttgacgcatttcccatgataccaacgctcgca 403 |||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct: 20402467 caggtgtgatcttcacgcactttccatggtaccaccgctcgca 20402425
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 38559671 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 38559730 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 38559731 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgca 38559777
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 152752 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 152811 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 152812 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgca 152858
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 80352 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 80411 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 80412 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgca 80458
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 17644 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 17703 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 17704 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgca 17750
>dbj|AK121400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M22, full insert sequence Length = 1114 Score = 117 bits (59), Expect = 3e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 301 ccctcgccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgag 360 |||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 896 cccttgccctcttgttgccgcaatctgggcacttgtagtgtttgatatgctcggctcgag 837 Query: 361 caggcgtgatcttgacgcatttcccatgataccaacgctcgca 403 |||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct: 836 caggtgtgatcttcacgcactttccatggtaccaccgctcgca 794
>dbj|AK071139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082D05, full insert sequence Length = 1296 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 1033 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 974 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 973 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgca 927
>dbj|AK059311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G08, full insert sequence Length = 2105 Score = 117 bits (59), Expect = 3e-23 Identities = 92/103 (89%) Strand = Plus / Minus Query: 301 ccctcgccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgag 360 |||| ||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 1814 cccttgccctcttgttgccgcaatctgggcacttgtagtgtttgatatgctcggctcgag 1755 Query: 361 caggcgtgatcttgacgcatttcccatgataccaacgctcgca 403 |||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct: 1754 caggtgtgatcttcacgcactttccatggtaccaccgctcgca 1712
>dbj|AK058498.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F01, full insert sequence Length = 323 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 136 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 77 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 76 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgca 30
>dbj|AK058384.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-H10, full insert sequence Length = 576 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 403 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 344 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 343 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgca 297
>gb|AF047428.1|AF047428 Oryza sativa nucleic acid binding protein mRNA, complete cds Length = 1156 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 921 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 862 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 861 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgca 815
>gb|AF045571.1|AF045571 Oryza sativa nucleic acid binding protein mRNA, complete cds Length = 1125 Score = 117 bits (59), Expect = 3e-23 Identities = 95/107 (88%) Strand = Plus / Minus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggc 365 |||||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct: 920 gccctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggt 861 Query: 366 gtgatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 860 gtgatcttgacgcacttcccatgataccacttctcgcagttatcgca 814
>gb|AY103945.1| Zea mays PCO073257 mRNA sequence Length = 1241 Score = 113 bits (57), Expect = 5e-22 Identities = 96/109 (88%) Strand = Plus / Minus Query: 307 ccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcg 366 ||||||||||| ||||||||||||||||||| |||||||| |||||||| ||||| |||| Sbjct: 943 ccctcttgttggtgcagtctgggcacttgtactgcttgatatgctcggcccgagcgggcg 884 Query: 367 tgatcttgacgcatttcccatgataccaacgctcgcagttgtcgcagca 415 |||||||||| || ||||| || ||||| ||||||||| |||||||| Sbjct: 883 tgatcttgacacacttcccgtggtaccacttctcgcagttatcgcagca 835
>gb|AF133118.1|AF133118 Oryza sativa nucleic acid binding protein (NBP) gene, complete cds Length = 5552 Score = 113 bits (57), Expect = 5e-22 Identities = 93/105 (88%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgt 367 |||||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| || || Sbjct: 5090 cctcttgttggtgcagtccgggcacttgtactgcttgatatgctcggcacgagcgggtgt 5031 Query: 368 gatcttgacgcatttcccatgataccaacgctcgcagttgtcgca 412 |||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 5030 gatcttgacgcacttcccatgataccacttctcgcagttatcgca 4986
>gb|AC146308.2| Medicago truncatula clone mth2-10a12, complete sequence Length = 112733 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 326 tgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccc 385 |||||||||||| |||||||| |||||||| |||||||| |||||||| || ||||| || Sbjct: 82287 tgggcacttgtattgcttgatatgctcggcacgagcaggagtgatcttcacacattttcc 82228 Query: 386 atgataccaacgctcgcagttgtcgcagcaa 416 ||| |||| ||||||| ||||||||||| Sbjct: 82227 atggaaccacttctcgcagatgtcgcagcaa 82197
>gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete sequence Length = 121248 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 326 tgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgcatttccc 385 |||||||||||| |||||||| |||||||| |||||||| |||||||| || ||||| || Sbjct: 87793 tgggcacttgtattgcttgatatgctcggcacgagcaggagtgatcttcacacattttcc 87852 Query: 386 atgataccaacgctcgcagttgtcgcagcaa 416 ||| |||| ||||||| ||||||||||| Sbjct: 87853 atggaaccacttctcgcagatgtcgcagcaa 87883
>gb|BT008959.1| Triticum aestivum clone wdk1c.pk012.i11:fis, full insert mRNA sequence Length = 1300 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 314 gttgctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatctt 373 |||| |||| || |||||| |||||||||||||||||| || || || ||||||||||| Sbjct: 862 gttggtgcactccgggcaccggtagtgcttgatgtgctccgcccgggcgggcgtgatctt 803 Query: 374 gacgcatttcccatgataccaacgctcgcagttgtcgcagca 415 |||||| || || || ||||| |||||||||||||||||| Sbjct: 802 gacgcacttgccgtggtaccacttctcgcagttgtcgcagca 761
>ref|XM_470117.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||| |||||||||||||||||||||||||| Sbjct: 813 tgctgcagtcagggcacttgtagtgcttgatgtgctc 777
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||| |||||||||||||||||||||||||| Sbjct: 34039640 tgctgcagtcagggcacttgtagtgcttgatgtgctc 34039676
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||| |||||||||||||||||||||||||| Sbjct: 34130112 tgctgcagtcagggcacttgtagtgcttgatgtgctc 34130148
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||| |||||||||||||||||||||||||| Sbjct: 3452 tgctgcagtcagggcacttgtagtgcttgatgtgctc 3488
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||| |||||||||||||||||||||||||| Sbjct: 18051 tgctgcagtcagggcacttgtagtgcttgatgtgctc 18015
>dbj|AK103363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126N11, full insert sequence Length = 1202 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||| |||||||||||||||||||||||||| Sbjct: 823 tgctgcagtcagggcacttgtagtgcttgatgtgctc 787
>gb|AY104096.1| Zea mays PCO134301 mRNA sequence Length = 674 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 317 gctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgac 376 ||||||||| ||||||||||||||||| ||||| || ||| ||||| |||||| || Sbjct: 282 gctgcagtccgggcacttgtagtgctttatgtggtccgctttggcaggggtgatccgcac 223 Query: 377 gcatttcccatgataccaacgctcgcagttgtcgcagc 414 ||| ||||| || |||| ||||||||| ||||||||| Sbjct: 222 gcacttcccgtggaaccaccgctcgcagatgtcgcagc 185
>ref|XM_466276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1196 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 864 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 820
>ref|XM_506831.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.22 mRNA Length = 1213 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 876 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 832
>ref|XM_472642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 759 cctcttgttgctgcagccaggacacttgtaatgcttgatgtgctc 715
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||||| |||||||||||||||||||||||||| Sbjct: 19983 tgctgcagttcgggcacttgtagtgcttgatgtgctc 19947
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||||| |||||||||||||||||||||||||| Sbjct: 120671 tgctgcagttcgggcacttgtagtgcttgatgtgctc 120635
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 22167176 cctcttgttgctgcagccaggacacttgtaatgcttgatgtgctc 22167132
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||||| |||||||||||||||||||||||||| Sbjct: 7696284 tgctgcagttcgggcacttgtagtgcttgatgtgctc 7696320
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 21436252 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 21436208
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 31179 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 31135
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 96205 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 96161
>dbj|AK105951.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D01, full insert sequence Length = 1196 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 864 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 820
>dbj|AK103215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122M22, full insert sequence Length = 1199 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||||| |||||||||||||||||||||||||| Sbjct: 836 tgctgcagttcgggcacttgtagtgcttgatgtgctc 800
>dbj|AK098960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072K02, full insert sequence Length = 1234 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 937 cctcttgttgctgcagccaggacacttgtaatgcttgatgtgctc 893
>dbj|AK073526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046L10, full insert sequence Length = 1213 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||| |||||||| | ||||||||||| |||||||||||||| Sbjct: 876 cctcttgctgctgcagccagggcacttgtactgcttgatgtgctc 832
>dbj|AK063657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-B10, full insert sequence Length = 1249 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 953 cctcttgttgctgcagccaggacacttgtaatgcttgatgtgctc 909
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtgctc 352 ||||||||| |||||||||||||||||||||||||| Sbjct: 7766371 tgctgcagttcgggcacttgtagtgcttgatgtgctc 7766407
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 308 cctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctc 352 |||||||||||||||| | || |||||||| |||||||||||||| Sbjct: 37037 cctcttgttgctgcagccaggacacttgtaatgcttgatgtgctc 36993
>gb|AY110004.1| Zea mays CL16185_1 mRNA sequence Length = 1230 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 327 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgacgca 379 ||||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 198 gggcacttgtactgcttgatgtgctcggccttggccgccgtgatcttgacgca 250
>ref|NM_122522.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT5G26210 mRNA, complete cds Length = 1488 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Minus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctc 357 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 891 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctc 840
>ref|NM_122521.4| Arabidopsis thaliana binding AT5G26200 mRNA, complete cds Length = 1636 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctc 357 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 1435 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctc 1486
>gb|AC005965.1| Arabidopsis thaliana BAC T19G15, from chromosome V near 60.5 cM, complete sequence Length = 77036 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctc 357 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 14103 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctc 14154
>gb|BT024475.1| Arabidopsis thaliana At5g26210 mRNA, complete cds Length = 768 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Minus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctc 357 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 758 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctc 707
>gb|AY087173.1| Arabidopsis thaliana clone 32443 mRNA, complete sequence Length = 1145 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Minus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctc 357 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 891 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctc 840
>gb|AF077407.1|F9D12 Arabidopsis thaliana BAC F9D12 Length = 112253 Score = 48.1 bits (24), Expect = 0.023 Identities = 45/52 (86%) Strand = Plus / Plus Query: 306 gccctcttgttgctgcagtctgggcacttgtagtgcttgatgtgctcggctc 357 ||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 2856 gcccttttgttgctgcaagaagggcacttgtattgcttgatgtgctcagctc 2907
>gb|AY110398.1| Zea mays CL736_1 mRNA sequence Length = 1234 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Minus Query: 317 gctgcagtctgggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgac 376 |||||||| || |||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 866 gctgcagttcggacacttgtagtgcttgatgtgttcggccttggcaggagtgatcttgac 807
>gb|BT020505.1| Arabidopsis thaliana At5g20510 gene, complete cds Length = 783 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatctt 373 ||||||||||| |||||||| ||||| |||| ||| || |||||||| Sbjct: 752 gggcacttgtaatgcttgatatgctccgctctagctggagtgatctt 706
>ref|NM_122058.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT5G20510 mRNA, complete cds Length = 1229 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatctt 373 ||||||||||| |||||||| ||||| |||| ||| || |||||||| Sbjct: 799 gggcacttgtaatgcttgatatgctccgctctagctggagtgatctt 753
>ref|NM_122057.2| Arabidopsis thaliana arsenate reductase (glutaredoxin)/ electron transporter/ thiol-disulfide exchange intermediate AT5G20500 mRNA, complete cds Length = 1064 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Plus Query: 327 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatctt 373 ||||||||||| |||||||| ||||| |||| ||| || |||||||| Sbjct: 819 gggcacttgtaatgcttgatatgctccgctctagctggagtgatctt 865
>gb|BT015937.1| Arabidopsis thaliana At5g20510 mRNA, complete cds Length = 907 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatctt 373 ||||||||||| |||||||| ||||| |||| ||| || |||||||| Sbjct: 795 gggcacttgtaatgcttgatatgctccgctctagctggagtgatctt 749
>gb|BT009050.1| Triticum aestivum clone wdk9n1.pk001.m5:fis, full insert mRNA sequence Length = 1147 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatctt 373 ||||| |||||||||||||||||||| ||| ||||| |||||||| Sbjct: 832 gggcatttgtagtgcttgatgtgctcagctttggcaggggtgatctt 786
>gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8 Length = 70169 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Plus Query: 327 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatctt 373 ||||||||||| |||||||| ||||| |||| ||| || |||||||| Sbjct: 42973 gggcacttgtaatgcttgatatgctccgctctagctggagtgatctt 43019
>ref|XM_479105.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1168 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctc 352 ||||||||||| |||||||||||||| Sbjct: 790 gggcacttgtactgcttgatgtgctc 765
>ref|NM_186688.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtg 349 ||||||| || ||||||||||||||||| ||||| Sbjct: 784 tgctgcaatcagggcacttgtagtgctttatgtg 751
>gb|AY918932.1| Schoenoplectus americanus clone SCAM.02 microsatellite sequence Length = 442 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctc 352 ||||| |||||||||||||||||||| Sbjct: 284 gggcatttgtagtgcttgatgtgctc 259
>ref|XM_505036.1| Yarrowia lipolytica CLIB122, YALI0F05522g predicted mRNA Length = 486 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 328 ggcacttgtagtgcttgatgtgctcg 353 |||||||| ||||||||||||||||| Sbjct: 304 ggcacttggagtgcttgatgtgctcg 279
>gb|BT009102.1| Triticum aestivum clone wkm2n.pk004.d7:fis, full insert mRNA sequence Length = 1221 Score = 44.1 bits (22), Expect = 0.36 Identities = 43/50 (86%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctcggctcgagcaggcgtgatcttgac 376 ||||||||||| |||||||||||||| || || |||||||||||||| Sbjct: 889 gggcacttgtactgcttgatgtgctccgccttggccggcgtgatcttgac 840
>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to human KIBRA, a pseudogene similar to part of actin, the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and two CpG islands, complete sequence Length = 186736 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 caacactactacaccaaccaaccaac 105 |||||| ||||||||||||||||||| Sbjct: 41458 caacaccactacaccaaccaaccaac 41483
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 327 gggcacttgtagtgcttgatgtgctc 352 ||||||||||| |||||||||||||| Sbjct: 125337 gggcacttgtactgcttgatgtgctc 125362
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctc 352 ||||||||||| |||||||||||||| Sbjct: 24963816 gggcacttgtactgcttgatgtgctc 24963791 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtg 349 ||||||| || ||||||||||||||||| ||||| Sbjct: 7447102 tgctgcaatcagggcacttgtagtgctttatgtg 7447135
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctc 352 ||||||||||| |||||||||||||| Sbjct: 147448 gggcacttgtactgcttgatgtgctc 147423
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13 Length = 131155 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctc 352 ||||||||||| |||||||||||||| Sbjct: 4496 gggcacttgtactgcttgatgtgctc 4471
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0061L20 Length = 138926 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtg 349 ||||||| || ||||||||||||||||| ||||| Sbjct: 25416 tgctgcaatcagggcacttgtagtgctttatgtg 25449
>dbj|AK109447.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H11, full insert sequence Length = 1220 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 327 gggcacttgtagtgcttgatgtgctc 352 ||||||||||| |||||||||||||| Sbjct: 842 gggcacttgtactgcttgatgtgctc 817
>dbj|AK073637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048B22, full insert sequence Length = 1155 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtg 349 ||||||| || ||||||||||||||||| ||||| Sbjct: 784 tgctgcaatcagggcacttgtagtgctttatgtg 751
>dbj|AK063803.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-F12, full insert sequence Length = 591 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 316 tgctgcagtctgggcacttgtagtgcttgatgtg 349 ||||||| || ||||||||||||||||| ||||| Sbjct: 220 tgctgcaatcagggcacttgtagtgctttatgtg 187
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 328 ggcacttgtagtgcttgatgtgctcg 353 |||||||| ||||||||||||||||| Sbjct: 825655 ggcacttggagtgcttgatgtgctcg 825680
>ref|NM_111955.1| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT3G11200 transcript variant AT3G11200.1 mRNA, complete cds Length = 1255 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 atcttgacgcatttcccatgataccaacg 397 |||||||||||||| ||||| |||||||| Sbjct: 838 atcttgacgcattttccatggtaccaacg 810
>ref|NM_202551.1| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT3G11200 transcript variant AT3G11200.2 mRNA, complete cds Length = 1404 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 atcttgacgcatttcccatgataccaacg 397 |||||||||||||| ||||| |||||||| Sbjct: 986 atcttgacgcattttccatggtaccaacg 958
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 atcttgacgcatttcccatgataccaacg 397 |||||||||||||| ||||| |||||||| Sbjct: 7654 atcttgacgcattttccatggtaccaacg 7626
>gb|AY143832.1| Arabidopsis thaliana At3g11200/F11B9.12 mRNA, complete cds Length = 741 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 atcttgacgcatttcccatgataccaacg 397 |||||||||||||| ||||| |||||||| Sbjct: 668 atcttgacgcattttccatggtaccaacg 640
>gb|AY058833.1| Arabidopsis thaliana At3g11200/F11B9.12 mRNA, complete cds Length = 1134 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 atcttgacgcatttcccatgataccaacg 397 |||||||||||||| ||||| |||||||| Sbjct: 804 atcttgacgcattttccatggtaccaacg 776
>emb|BX823096.1|CNS0A79Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 641 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 atcttgacgcatttcccatgataccaacg 397 |||||||||||||| ||||| |||||||| Sbjct: 310 atcttgacgcattttccatggtaccaacg 282
>emb|BX822406.1|CNS0A7CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1404 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 atcttgacgcatttcccatgataccaacg 397 |||||||||||||| ||||| |||||||| Sbjct: 986 atcttgacgcattttccatggtaccaacg 958
>emb|BX826146.1|CNS0A6H5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1017 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 atcttgacgcatttcccatgataccaacg 397 |||||||||||||| ||||| |||||||| Sbjct: 764 atcttgacgcattttccatggtaccaacg 736
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 atcttgacgcatttcccatgataccaacg 397 |||||||||||||| ||||| |||||||| Sbjct: 45626 atcttgacgcattttccatggtaccaacg 45654
>gb|AC001231.3| Homo sapiens chromosome 17, clone CTB-44J6, complete sequence Length = 134457 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 caaccaacggtttaaaacacacaca 122 |||||||| |||||||||||||||| Sbjct: 49024 caaccaactgtttaaaacacacaca 49000
>gb|AY085138.1| Arabidopsis thaliana clone 13297 mRNA, complete sequence Length = 1255 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 atcttgacgcatttcccatgataccaacg 397 |||||||||||||| ||||| |||||||| Sbjct: 838 atcttgacgcattttccatggtaccaacg 810
>gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, complete sequence Length = 189907 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 aatgctaggccatatctgcag 214 ||||||||||||||||||||| Sbjct: 75263 aatgctaggccatatctgcag 75283
>gb|AC145963.5| Gallus gallus BAC clone CH261-20A24 from chromosome unknown, complete sequence Length = 185318 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctgcagccttgctggtgcttt 286 ||||||||||||||||||||| Sbjct: 26934 ctgcagccttgctggtgcttt 26914
>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete sequence Length = 224168 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aatgctaggccatatctgcag 214 ||||||||||||||||||||| Sbjct: 24825 aatgctaggccatatctgcag 24805
>gb|BT017810.1| Zea mays clone EL01N0507A04.c mRNA sequence Length = 1011 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 312 ttgttgctgcagtctgggcacttgtagtgctt 343 |||| |||||| || ||||||||||||||||| Sbjct: 754 ttgtagctgcaatcagggcacttgtagtgctt 723
>gb|AC090426.1| Homo sapiens chromosome 17 clone 205m17 map 17q21.1, complete sequence Length = 138999 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 taggccatatctgcaggctg 218 |||||||||||||||||||| Sbjct: 66449 taggccatatctgcaggctg 66468
>ref|XM_460682.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F08272g) partial mRNA Length = 768 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aaacacacacaagtcaagag 131 |||||||||||||||||||| Sbjct: 322 aaacacacacaagtcaagag 341
>emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in linkage group 5, complete sequence Length = 230648 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aaacacacacaagtcaagag 131 |||||||||||||||||||| Sbjct: 128623 aaacacacacaagtcaagag 128642
>gb|AE004242.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 150 of 251 of the complete chromosome Length = 10333 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gaaacgaaaaacgagtctat 185 |||||||||||||||||||| Sbjct: 3815 gaaacgaaaaacgagtctat 3834
>gb|AC080112.15| Homo sapiens chromosome 17, clone CTD-2267D19, complete sequence Length = 175014 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 taggccatatctgcaggctg 218 |||||||||||||||||||| Sbjct: 50374 taggccatatctgcaggctg 50393
>gb|AC018629.12| Homo sapiens chromosome 17, clone RP11-58O9, complete sequence Length = 166234 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 taggccatatctgcaggctg 218 |||||||||||||||||||| Sbjct: 28372 taggccatatctgcaggctg 28353
>gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, complete sequence Length = 203604 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccatatctgcaggctgcggc 222 |||||||||||||||||||| Sbjct: 93890 ccatatctgcaggctgcggc 93909
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aaacacacacaagtcaagag 131 |||||||||||||||||||| Sbjct: 660591 aaacacacacaagtcaagag 660610
>gb|AC099017.1| Drosophila melanogaster, chromosome 2L, region 37D-37E, BAC clone BACR27M12, complete sequence Length = 157766 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 accaaccaacggtttaaaac 115 |||||||||||||||||||| Sbjct: 13702 accaaccaacggtttaaaac 13721
>emb|BX470068.7| Zebrafish DNA sequence from clone CH211-219C8 in linkage group 1, complete sequence Length = 210511 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ggtttaaaacacacacaagt 125 |||||||||||||||||||| Sbjct: 148395 ggtttaaaacacacacaagt 148414
>gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR28G24, complete sequence Length = 171375 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 accaaccaacggtttaaaac 115 |||||||||||||||||||| Sbjct: 119894 accaaccaacggtttaaaac 119913
>gb|L07291.1|ALFNABP Alfalfa nucleic acid binding protein (alfin-1) mRNA, complete cds Length = 904 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 318 ctgcagtctgggcacttgtagtgcttgatgtg 349 |||||| | ||||||||||| ||||||||||| Sbjct: 779 ctgcagccagggcacttgtattgcttgatgtg 748
>gb|AF400187.1| Spodoptera frugiperda ribosomal protein L21 mRNA, complete cds Length = 562 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 gcacttgtagtgcttgatgtgctc 352 ||||||| |||||||||||||||| Sbjct: 345 gcacttggagtgcttgatgtgctc 322
>gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71 of 83 of the complete sequence Length = 266205 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 accaaccaacggtttaaaac 115 |||||||||||||||||||| Sbjct: 251466 accaaccaacggtttaaaac 251485
>gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, complete sequence Length = 208140 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccatatctgcaggctgcggc 222 |||||||||||||||||||| Sbjct: 134692 ccatatctgcaggctgcggc 134711
>emb|AL954311.13| Zebrafish DNA sequence from clone CH211-138M12 in linkage group 5, complete sequence Length = 168421 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aaacacacacaagtcaagag 131 |||||||||||||||||||| Sbjct: 102694 aaacacacacaagtcaagag 102675
>dbj|AB094591.1| Allium fistulosum lfs mRNA for lachrymatory factor synthase, complete cds, note:type-63E Length = 682 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 acggtttaaaacacacacaa 123 |||||||||||||||||||| Sbjct: 558 acggtttaaaacacacacaa 539
>dbj|AB094590.1| Allium fistulosum lfs mRNA for lachrymatory factor synthase, complete cds, note:type-63K Length = 739 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 acggtttaaaacacacacaa 123 |||||||||||||||||||| Sbjct: 615 acggtttaaaacacacacaa 596
>emb|AL671892.6| Mouse DNA sequence from clone RP23-188D5 on chromosome 4, complete sequence Length = 111620 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gctgcagtctgggcacttgt 336 |||||||||||||||||||| Sbjct: 89558 gctgcagtctgggcacttgt 89577 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,346,467 Number of Sequences: 3902068 Number of extensions: 3346467 Number of successful extensions: 107141 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106775 Number of HSP's gapped (non-prelim): 366 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
