Clone Name | rbart06h08 |
---|---|
Clone Library Name | barley_pub |
>CAKI_DROME (Q24210) Calcium/calmodulin-dependent protein kinase (EC 2.7.11.17)| (CAKI) (Peripheral plasma membrane protein CaMGUK) Length = 898 Score = 30.8 bits (68), Expect = 0.82 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 Query: 226 LHGGRIYRSRGTSVGDSLVSVAGQSRQHRS 137 +HGG I+R VGD + + GQ QH+S Sbjct: 524 MHGGMIHRQATLHVGDEIREINGQPVQHQS 553
>P2SAF_ARATH (O82660) Photosystem II stability/assembly factor HCF136,| chloroplast precursor Length = 403 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 244 GNLWCNLHGGRIYRSRGTSVGDSLVSVAGQSR 149 G LW + GG +Y S+GT + + V QSR Sbjct: 300 GGLWLLVRGGGLYLSKGTGITEEFEEVPVQSR 331
>M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kinase kinase 4| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase) Length = 1239 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +2 Query: 206 VDPSTMKVAPQISSSSAGTAVTLFLGFSYDLRPPRAFQ*KQPCGKGA 346 +DP ++++P S+GT VT +GFS D P A + + P KG+ Sbjct: 860 IDPRLLQISP-----SSGTTVTSVVGFSCDGMRPEAIR-QDPTRKGS 900
>LAC1_CRYPA (Q03966) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen| oxidoreductase) (Urishiol oxidase) Length = 591 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -2 Query: 366 GSCGKSXAPFPQGCFYWNALGGLKSYENPKNKVTAVPADEE 244 G CGKS P+P ++N S +P NK A PAD E Sbjct: 330 GFCGKSNNPYPAAIIHYNG----ASNSHPTNKGVA-PADHE 365
>M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kinase kinase 4| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase) Length = 1233 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +2 Query: 206 VDPSTMKVAPQISSSSAGTAVTLFLGFSYDLRPPRAFQ*KQPCGKGA 346 +DP ++++P S+GT VT +GFS D P A + + P KG+ Sbjct: 854 IDPRLLQISP-----SSGTTVTSVVGFSCDGLRPEAIR-QDPTRKGS 894
>NFAC1_MOUSE (O88942) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) Length = 717 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +2 Query: 209 DPSTMKVAPQISSSSAGTAVTLF-LGFSYDLRPPRAFQ*KQPCGKGAXDLPQDPFSRSMS 385 DPS + A +SS S + + + +SY P+ + PC P++ F RS+ Sbjct: 169 DPSCLSPASSLSSRSCNSEASSYESNYSYPYASPQTSPWQSPCVSPKTTDPEEGFPRSLG 228 Query: 386 S 388 + Sbjct: 229 A 229
>NFAC1_PIG (O77638) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) (NFATmac) Length = 822 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = +2 Query: 209 DPSTMKVAPQISSSSAGTAVTLF-LGFSYDLRPPRAFQ*KQPCGKGAXDLPQDPFSRSMS 385 DPS + A +SS S + + + FSY P+ + PC P++ F R + Sbjct: 159 DPSCLSPASSLSSRSCNSEASSYESSFSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLG 218 Query: 386 S 388 + Sbjct: 219 A 219
>ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 583 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -2 Query: 339 FPQGCFYWNALGGLKSYENPKNKVTAVPADEEE 241 FP G FY + LGG K + NP +VP+ E Sbjct: 173 FPPGHFYSSKLGGFKQWYNPPWFNESVPSTPYE 205
>LIN2_CAEEL (P54936) Protein lin-2 (Abnormal cell lineage protein 2)| Length = 961 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -1 Query: 226 LHGGRIYRSRGTSVGDSLVSVAGQSRQHRS 137 +HGG I+R VGD + + G S +RS Sbjct: 575 MHGGMIHRQATLHVGDEIREINGMSVANRS 604 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,195,923 Number of Sequences: 219361 Number of extensions: 902688 Number of successful extensions: 2502 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2416 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2502 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)