Clone Name | rbart06h02 |
---|---|
Clone Library Name | barley_pub |
>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea| m I) Length = 269 Score = 37.0 bits (84), Expect = 0.021 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = -2 Query: 433 KLVANNVIPANWRPNTDYRSXVQF 362 K++A +VIPANWRP+ Y S VQF Sbjct: 245 KVIAKDVIPANWRPDAVYTSNVQF 268
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 37.0 bits (84), Expect = 0.021 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -2 Query: 430 LVANNVIPANWRPNTDYRSXVQF 362 +VA NVIPANW+P+ YRS V F Sbjct: 237 IVAYNVIPANWKPDESYRSIVNF 259
>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)| (Fragment) Length = 191 Score = 36.6 bits (83), Expect = 0.027 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = -2 Query: 433 KLVANNVIPANWRPNTDYRSXVQF 362 K++A ++IPANWRP+ Y S VQF Sbjct: 167 KVIAKDIIPANWRPDAVYTSNVQF 190
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 35.0 bits (79), Expect = 0.079 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -2 Query: 430 LVANNVIPANWRPNTDYRSXVQF 362 +VA+NVIPANW+P Y+S V F Sbjct: 251 VVASNVIPANWQPGAIYKSNVNF 273
>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1| Length = 246 Score = 34.7 bits (78), Expect = 0.10 Identities = 14/23 (60%), Positives = 19/23 (82%) Frame = -2 Query: 430 LVANNVIPANWRPNTDYRSXVQF 362 LV ++VIPANW+P+T Y S +QF Sbjct: 222 LVQDDVIPANWKPDTVYTSKLQF 244
>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)| (Ath-ExpBeta-1.5) Length = 271 Score = 28.9 bits (63), Expect = 5.7 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 Query: 430 LVANNVIPANWRPNTDYRSXVQFS 359 L A +VIP+NW P Y S + FS Sbjct: 245 LSATDVIPSNWVPKATYTSRLNFS 268
>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)| (Ath-ExpBeta-1.3) Length = 264 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -2 Query: 433 KLVANNVIPANWRPNTDYRSXVQF 362 K++A VIP W P Y S V F Sbjct: 234 KIIAKGVIPEKWSPGAIYHSKVNF 257
>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)| (Ath-ExpBeta-1.6) Length = 264 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -2 Query: 430 LVANNVIPANWRPNTDYRSXVQFS 359 L A +V+P NW P Y S + FS Sbjct: 238 LSATDVVPRNWAPKATYSSRLNFS 261
>E78C_DROME (P45447) Ecdysone-induced protein 78C (DR-78)| Length = 866 Score = 28.1 bits (61), Expect = 9.7 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 6/61 (9%) Frame = -1 Query: 422 QQCHPGQLEAQHRLPL------LXPVQLIGPDRPMSGHVRXHHARMHACLRSGPSAGCSS 261 QQ HPGQ + Q L L + + P S H + + S P +GCSS Sbjct: 200 QQQHPGQQQHQLNCTLSNGGGALYTISSVHQFGPASNHNTSSSSPSSSAAHSSPDSGCSS 259 Query: 260 S 258 + Sbjct: 260 A 260 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,992,071 Number of Sequences: 219361 Number of extensions: 1111207 Number of successful extensions: 3184 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2908 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3183 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)