Clone Name | rbart06g11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC151665.26| Medicago truncatula clone mth2-7k4, complete sequence Length = 135880 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 catcttttggagttgctcctta 79 |||||||||||||||||||||| Sbjct: 96015 catcttttggagttgctcctta 96036
>gb|AC174354.6| Medicago truncatula clone mth2-8m12, complete sequence Length = 122859 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 catcttttggagttgctcctta 79 |||||||||||||||||||||| Sbjct: 87347 catcttttggagttgctcctta 87368
>emb|BX927179.9| Zebrafish DNA sequence from clone CH211-194N20 in linkage group 5, complete sequence Length = 121960 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ttcaccatgaagaccatctca 254 ||||||||||||||||||||| Sbjct: 81170 ttcaccatgaagaccatctca 81150
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 catcttttggagttgctcctt 78 ||||||||||||||||||||| Sbjct: 515051 catcttttggagttgctcctt 515071
>emb|AL808120.9| Mouse DNA sequence from clone RP23-418E2 on chromosome X, complete sequence Length = 148328 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 aaacaaatctttcagcaacat 129 ||||||||||||||||||||| Sbjct: 50846 aaacaaatctttcagcaacat 50866
>gb|AY485422.1| Aotus sp. PDE-2004 ASPM mRNA, complete cds Length = 10422 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 gcaaaatgcaattacaagta 178 |||||||||||||||||||| Sbjct: 4298 gcaaaatgcaattacaagta 4317
>gb|AY485419.1| Saimiri boliviensis isolate SqMon1 ASPM mRNA, complete cds Length = 10410 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 gcaaaatgcaattacaagta 178 |||||||||||||||||||| Sbjct: 4283 gcaaaatgcaattacaagta 4302
>gb|AC132242.2| Mus musculus BAC clone RP24-413O2 from chromosome 18, complete sequence Length = 177442 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tctttcagcaacattgattg 135 |||||||||||||||||||| Sbjct: 92233 tctttcagcaacattgattg 92214
>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence Length = 168940 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tatatatggctggaaacaaa 115 |||||||||||||||||||| Sbjct: 32507 tatatatggctggaaacaaa 32526
>emb|AL158850.8| Human DNA sequence from clone RP3-522B19 on chromosome 6 Contains part of a novel gene, the 3' end of the gene for novel protein DKFZp451A175 (similar to M. musculus muscle-derived protein MDP77) and part of a novel gene, complete sequence Length = 91351 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gaagaccatctcaaagacaa 261 |||||||||||||||||||| Sbjct: 56140 gaagaccatctcaaagacaa 56159
>gb|AF326506.1|AF326506 Zea mays tonoplast membrane integral protein ZmTIP4-2 mRNA, complete cds Length = 1255 Score = 40.1 bits (20), Expect = 4.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 213 agcagaggctcgggcgtcttcttcaccatgaa 244 ||||| |||||| ||||||| ||||||||||| Sbjct: 887 agcagcggctcgtgcgtcttgttcaccatgaa 856 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,716,697 Number of Sequences: 3902068 Number of extensions: 2716697 Number of successful extensions: 52749 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52721 Number of HSP's gapped (non-prelim): 28 length of query: 305 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 283 effective length of database: 17,147,199,772 effective search space: 4852657535476 effective search space used: 4852657535476 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)