>gb|AC010236.5| Homo sapiens chromosome 5 clone CTC-340D7, complete sequence
          Length = 121439

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 141   agtacaaagaaagaggggaaaaa 163
             |||||||||||||||||||||||
Sbjct: 92446 agtacaaagaaagaggggaaaaa 92424

>gb|AC010499.6| Homo sapiens chromosome 5 clone CTD-2366O5, complete sequence
          Length = 74377

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 141   agtacaaagaaagaggggaaaaa 163
             |||||||||||||||||||||||
Sbjct: 60652 agtacaaagaaagaggggaaaaa 60674

>gb|AC024567.6|AC024567 Homo sapiens chromosome 5 clone CTD-2161I13, complete sequence
          Length = 99338

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 141   agtacaaagaaagaggggaaaaa 163
             |||||||||||||||||||||||
Sbjct: 44100 agtacaaagaaagaggggaaaaa 44078

>emb|BX294657.11| Zebrafish DNA sequence from clone DKEY-21K18 in linkage group 19,
             complete sequence
          Length = 124224

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 63    gaaatggcacaggtcacataaa 84
             ||||||||||||||||||||||
Sbjct: 98685 gaaatggcacaggtcacataaa 98664

>gb|AC098889.3| Mus musculus BAC clone RP23-122O10 from 10, complete sequence
          Length = 204770

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     atgatatatatctatctgaat 104
              |||||||||||||||||||||
Sbjct: 136793 atgatatatatctatctgaat 136813

>emb|CR936946.2| Medicago truncatula chromosome 5 clone mth2-77l22, COMPLETE SEQUENCE
          Length = 115705

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 120   aaaatcattcagatttgacag 140
             |||||||||||||||||||||
Sbjct: 89217 aaaatcattcagatttgacag 89237

>gb|AC097587.3| Sus scrofa clone RP44-50K20, complete sequence
          Length = 111967

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     ataaatgatatatatctatct 100
              |||||||||||||||||||||
Sbjct: 104817 ataaatgatatatatctatct 104797

>emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 in linkage group 16,
             complete sequence
          Length = 166820

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 114   aagttgaaaatcattcagatttgac 138
             |||||| ||||||||||||||||||
Sbjct: 32745 aagttgtaaatcattcagatttgac 32721

>emb|BX255949.3| Zebrafish DNA sequence from clone DKEY-76F5 in linkage group 2, complete
              sequence
          Length = 214484

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 114    aagttgaaaatcattcagatttgac 138
              |||||| ||||||||||||||||||
Sbjct: 103754 aagttgtaaatcattcagatttgac 103730

>gb|AC124985.16| Mus musculus chromosome 8, clone RP24-230O22, complete sequence
          Length = 171213

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    aaaatcattcagatttgaca 139
              ||||||||||||||||||||
Sbjct: 157112 aaaatcattcagatttgaca 157131

>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
             complete sequence
          Length = 176678

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    gtcacataaatgatatatat 94
             ||||||||||||||||||||
Sbjct: 33174 gtcacataaatgatatatat 33155

>gb|AC093349.6| Mus musculus chromosome 19, clone RP23-16C14, complete sequence
          Length = 227274

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    aaaaatgagcacttttgcat 178
              ||||||||||||||||||||
Sbjct: 112946 aaaaatgagcacttttgcat 112927

>gb|AY599560.1| Bartonella bacilliformis division and cell wall gene cluster,
            complete sequence
          Length = 18104

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  tttgcatattgttcagcaag 191
            ||||||||||||||||||||
Sbjct: 9694 tttgcatattgttcagcaag 9713

>gb|AC127356.4| Mus musculus BAC clone RP23-100B5 from chromosome 8, complete sequence
          Length = 199258

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    aaaatcattcagatttgaca 139
              ||||||||||||||||||||
Sbjct: 167221 aaaatcattcagatttgaca 167202

>emb|AL513523.33| Human DNA sequence from clone RP11-216N14 on chromosome 1 Contains a
             survival of motor neuron protein interacting protein 1
             pseudogene (SIP1), a novel gene (FLJ21919), two novel
             genes, a novel gene, the SLC27A3 gene for solute carrier
             family 27 (fatty acid transporter), member 3, a pseudogene
             similar to part of putative neuronal cell adhesion
             molecule (PUNC), the 3' end of the gene for transcription
             repressor p66 beta component of the MeCP1 complex
             (P66beta), a adipose differentiation-related protein
             (ADFP) pseudogene and a CpG island, complete sequence
          Length = 150166

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 147   aagaaagaggggaaaaatgagcac 170
             ||||| ||||||||||||||||||
Sbjct: 45245 aagaaggaggggaaaaatgagcac 45222

>gb|AC163354.3| Mus musculus BAC clone RP23-49E21 from chromosome 12, complete sequence
          Length = 248060

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     aggggaaatggcacaggtca 78
              ||||||||||||||||||||
Sbjct: 103461 aggggaaatggcacaggtca 103442

>dbj|AK091908.1| Homo sapiens cDNA FLJ34589 fis, clone KIDNE2008832
          Length = 2118

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 147  aagaaagaggggaaaaatgagcac 170
            ||||| ||||||||||||||||||
Sbjct: 1146 aagaaggaggggaaaaatgagcac 1123

>gb|AC079264.23| Homo sapiens Xp BAC RP11-315B16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194851

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ttgaaaatcattcagatttg 136
              ||||||||||||||||||||
Sbjct: 186866 ttgaaaatcattcagatttg 186885

>gb|AC103798.2| Homo sapiens chromosome 11, clone RP11-159D8, complete sequence
          Length = 163680

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    tttacacaggaagttgaaaa 123
              ||||||||||||||||||||
Sbjct: 150618 tttacacaggaagttgaaaa 150599

>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence
          Length = 151589

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     gtcacataaatgatatatat 94
              ||||||||||||||||||||
Sbjct: 115573 gtcacataaatgatatatat 115554

>dbj|AK083031.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
            enriched library, clone:C530035E08
            product:unclassifiable, full insert sequence
          Length = 3903

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 120  aaaatcattcagatttgaca 139
            ||||||||||||||||||||
Sbjct: 3391 aaaatcattcagatttgaca 3372

>gb|AC022209.4|AC022209 Homo sapiens BAC clone RP11-588M21 from 11, complete sequence
          Length = 177314

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    tttacacaggaagttgaaaa 123
              ||||||||||||||||||||
Sbjct: 141392 tttacacaggaagttgaaaa 141411

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     gtcacataaatgatatatat 94
              ||||||||||||||||||||
Sbjct: 515775 gtcacataaatgatatatat 515756

>gb|AC019129.8| Homo sapiens BAC clone RP11-559M23 from 2, complete sequence
          Length = 172611

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 144    acaaagaaagaggggaaaaatgag 167
              ||||||||||| ||||||||||||
Sbjct: 112967 acaaagaaagaagggaaaaatgag 112990

>gb|AC092645.2| Homo sapiens BAC clone RP11-399B17 from 2, complete sequence
          Length = 147390

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   ttgaaaatcattcagatttg 136
             ||||||||||||||||||||
Sbjct: 35794 ttgaaaatcattcagatttg 35813

>gb|AC148151.3| Monodelphis domestica clone VMRC6-414K6, complete sequence
          Length = 158302

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    attgttcagcaaggcaagct 198
              ||||||||||||||||||||
Sbjct: 148282 attgttcagcaaggcaagct 148263

>emb|BX663502.9| Zebrafish DNA sequence from clone CH211-202C21 in linkage group 18,
              complete sequence
          Length = 188674

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     gttttccataaaccctgggt 32
              ||||||||||||||||||||
Sbjct: 175597 gttttccataaaccctgggt 175616

>emb|BX119983.4| Zebrafish DNA sequence from clone CH211-198G9 in linkage group 1,
             complete sequence
          Length = 172227

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   acaaagaaagaggggaaaaa 163
             ||||||||||||||||||||
Sbjct: 39966 acaaagaaagaggggaaaaa 39985

>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    attgttcagcaaggcaagct 198
              ||||||||||||||||||||
Sbjct: 148282 attgttcagcaaggcaagct 148263


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,275,384
Number of Sequences: 3902068
Number of extensions: 3275384
Number of successful extensions: 80916
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80811
Number of HSP's gapped (non-prelim): 105
length of query: 248
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 226
effective length of database: 17,147,199,772
effective search space: 3875267148472
effective search space used: 3875267148472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)