ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart06g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UMP7_ARATH (Q9FMV1) Unknown mitochondrial protein At5g63510 67 1e-11
2UMP8_ARATH (Q9SMN1) Unknown mitochondrial protein At3g48680 67 1e-11
3AMPL_BOVIN (P00727) Cytosol aminopeptidase (EC 3.4.11.1) (Leucin... 32 0.52
4AMPL_MOUSE (Q9CPY7) Cytosol aminopeptidase (EC 3.4.11.1) (Leucin... 30 1.5
5AMPL_HUMAN (P28838) Cytosol aminopeptidase (EC 3.4.11.1) (Leucin... 28 5.8
6FRI1_PEA (P19975) Ferritin-1, chloroplast precursor (EC 1.16.3.1) 27 9.9

>UMP7_ARATH (Q9FMV1) Unknown mitochondrial protein At5g63510|
          Length = 252

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 34/52 (65%), Positives = 37/52 (71%)
 Frame = -2

Query: 314 ARFVRKLPNEEIMEIPKLAVAINDLMQSHF*EFLPYFNAYWEVEKLKKSFSI 159
           ARF+R L NEE +EIPKLAVAIN L   +F EFLPY   Y EVEK KKS  I
Sbjct: 199 ARFIRTLTNEETLEIPKLAVAINHLSGDYFSEFLPYSTVYLEVEKFKKSLGI 250



to top

>UMP8_ARATH (Q9SMN1) Unknown mitochondrial protein At3g48680|
          Length = 256

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 34/52 (65%), Positives = 37/52 (71%)
 Frame = -2

Query: 314 ARFVRKLPNEEIMEIPKLAVAINDLMQSHF*EFLPYFNAYWEVEKLKKSFSI 159
           ARF+R L NEE +EIPKLAVAIN L   +F EFLPY   Y EVEK KKS  I
Sbjct: 203 ARFIRTLTNEETLEIPKLAVAINHLSGDYFSEFLPYSTIYLEVEKFKKSLGI 254



to top

>AMPL_BOVIN (P00727) Cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase) (Proline
           aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase)
          Length = 487

 Score = 31.6 bits (70), Expect = 0.52
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 4   QGRPRFTTMNKKFNVTNGPRLPIKLNTKLPSIRAALFPHSFAGRGKTRSYQGIENDF 174
           +  P+FT+  + FN     +L   LN   PS++A          GKTR++ G+  DF
Sbjct: 15  EDEPQFTSAGENFNKLVSGKLREILNISGPSLKA----------GKTRTFYGLHEDF 61



to top

>AMPL_MOUSE (Q9CPY7) Cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase) (Proline
           aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase)
          Length = 487

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 13  PRFTTMNKKFNVTNGPRLPIKLNTKLPSIRAALFPHSFAGRGKTRSYQGIENDF 174
           P+FT+  + FN     +L   LN   P ++A          GKTR++ G+  DF
Sbjct: 18  PQFTSAGESFNKLVSGKLREMLNISGPPLKA----------GKTRTFYGLHQDF 61



to top

>AMPL_HUMAN (P28838) Cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase) (Proline
           aminopeptidase) (EC 3.4.11.5) (Prolyl aminopeptidase)
           (Peptidase S)
          Length = 487

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +1

Query: 13  PRFTTMNKKFNVTNGPRLPIKLNTKLPSIRAALFPHSFAGRGKTRSYQGIENDF 174
           P+FT+  + F+     +L   LN   P ++A          GKTR++ G+  DF
Sbjct: 18  PQFTSAGENFDKLLAGKLRETLNISGPPLKA----------GKTRTFYGLHQDF 61



to top

>FRI1_PEA (P19975) Ferritin-1, chloroplast precursor (EC 1.16.3.1)|
          Length = 253

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 317 LARFVRKLPNEEIMEIPKLAVAINDLMQSHF*E 219
           LA  + KL NE+++ +  +A   NDL  +HF E
Sbjct: 177 LALSLEKLTNEKLLNVHSVAERNNDLEMTHFIE 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,435,497
Number of Sequences: 219361
Number of extensions: 835953
Number of successful extensions: 1636
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top