>gb|AY105364.1| Zea mays PCO091249 mRNA sequence
          Length = 880

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 301 tgggaaggaaattctgctttgaaagg 326
           ||||||||||||||||||||||||||
Sbjct: 469 tgggaaggaaattctgctttgaaagg 444



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 232 tcttgtgaaggaaattctgctttgaaagg 260
           ||||| |||||||||||||||||||||||
Sbjct: 472 tcttgggaaggaaattctgctttgaaagg 444

>ref|NM_192779.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 738

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 238 gaaggaaattctgctttgaaaggag 262
           |||||||||||||||||||||||||
Sbjct: 590 gaaggaaattctgctttgaaaggag 566



 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 304 gaaggaaattctgctttgaaagg 326
           |||||||||||||||||||||||
Sbjct: 590 gaaggaaattctgctttgaaagg 568

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 238      gaaggaaattctgctttgaaaggag 262
                |||||||||||||||||||||||||
Sbjct: 24375707 gaaggaaattctgctttgaaaggag 24375683



 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 304      gaaggaaattctgctttgaaagg 326
                |||||||||||||||||||||||
Sbjct: 24375707 gaaggaaattctgctttgaaagg 24375685

>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E01
          Length = 166753

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 238    gaaggaaattctgctttgaaaggag 262
              |||||||||||||||||||||||||
Sbjct: 121611 gaaggaaattctgctttgaaaggag 121587



 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 304    gaaggaaattctgctttgaaagg 326
              |||||||||||||||||||||||
Sbjct: 121611 gaaggaaattctgctttgaaagg 121589

>dbj|AK106098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-C03, full
            insert sequence
          Length = 1333

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 238  gaaggaaattctgctttgaaaggag 262
            |||||||||||||||||||||||||
Sbjct: 1030 gaaggaaattctgctttgaaaggag 1006



 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 304  gaaggaaattctgctttgaaagg 326
            |||||||||||||||||||||||
Sbjct: 1030 gaaggaaattctgctttgaaagg 1008

>dbj|AK103190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121N24, full
            insert sequence
          Length = 1439

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 238  gaaggaaattctgctttgaaaggag 262
            |||||||||||||||||||||||||
Sbjct: 1138 gaaggaaattctgctttgaaaggag 1114



 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 304  gaaggaaattctgctttgaaagg 326
            |||||||||||||||||||||||
Sbjct: 1138 gaaggaaattctgctttgaaagg 1116

>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence
          Length = 149005

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    atcccagaaaaagaaaggggt 49
             |||||||||||||||||||||
Sbjct: 86944 atcccagaaaaagaaaggggt 86924

>dbj|AK114044.1| Ciona intestinalis cDNA, clone:cicl025d11, full insert sequence
          Length = 1688

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 115  tggaagtccccaaagtcaaac 135
            |||||||||||||||||||||
Sbjct: 1266 tggaagtccccaaagtcaaac 1286

>gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosome 9, complete sequence
          Length = 217074

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 297   ttcctgggaaggaaattctgcttt 320
             |||||||||| |||||||||||||
Sbjct: 69597 ttcctgggaaagaaattctgcttt 69620

>gb|AY227942.1| Caenohalictus sp. BND-3 long-wavelength rhodopsin gene, partial cds
          Length = 852

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 cgaatcagttggagacacgg 361
           ||||||||||||||||||||
Sbjct: 754 cgaatcagttggagacacgg 735

>gb|AC185138.3| Pan troglodytes BAC clone CH251-126N5 from chromosome 8, complete
             sequence
          Length = 144660

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    agaaaaagaaaggggtcatg 53
             ||||||||||||||||||||
Sbjct: 28913 agaaaaagaaaggggtcatg 28894

>gb|AC122363.4| Mus musculus BAC clone RP23-437C1 from chromosome 19, complete sequence
          Length = 180129

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     gagatcccagaaaaagaaag 45
              ||||||||||||||||||||
Sbjct: 102583 gagatcccagaaaaagaaag 102564

>gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, complete sequence
          Length = 252723

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    tcctgggaaggaaattctgc 317
              ||||||||||||||||||||
Sbjct: 125082 tcctgggaaggaaattctgc 125063

>ref|XM_811813.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508181.120) partial mRNA
          Length = 4929

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 155  gtttgctcttctctgctgcagctg 178
            |||||||| |||||||||||||||
Sbjct: 3089 gtttgctcgtctctgctgcagctg 3112

>ref|XM_817037.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508153.850) partial mRNA
          Length = 4929

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 155  gtttgctcttctctgctgcagctg 178
            |||||||| |||||||||||||||
Sbjct: 3089 gtttgctcgtctctgctgcagctg 3112

>gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosome 17, complete
             sequence
          Length = 181626

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    gtcatgtatgtgtccacgta 67
             ||||||||||||||||||||
Sbjct: 61275 gtcatgtatgtgtccacgta 61294

>gb|AC004141.1| Homo sapiens PAC clone RP5-1110N13 from 7, complete sequence
          Length = 95921

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   ccaaagtcaaactcatcatc 143
             ||||||||||||||||||||
Sbjct: 91300 ccaaagtcaaactcatcatc 91281

>gb|AC111137.10| Mus musculus chromosome 5, clone RP23-357C4, complete sequence
          Length = 197271

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   aagtccccaaagtcaaactc 137
             ||||||||||||||||||||
Sbjct: 49604 aagtccccaaagtcaaactc 49585

>emb|AL627215.12| Mouse DNA sequence from clone RP23-292E3 on chromosome 11, complete
             sequence
          Length = 216106

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   tgggaaggaaattctgcttt 320
             ||||||||||||||||||||
Sbjct: 27110 tgggaaggaaattctgcttt 27129

>gb|AC092184.7| Homo sapiens 12 BAC RP11-438L7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 71132

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 148   cttccttgtttgctcttctctgct 171
             ||||| ||||||||||||||||||
Sbjct: 40204 cttccctgtttgctcttctctgct 40181

>gb|AF214658.1|AF214658 Mus musculus alpha(1,2)fucosyltransferase SEC1 (Sec1) gene, complete
            cds
          Length = 5357

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 104  cagcagcagcctggaagtccccaa 127
            |||||||||||| |||||||||||
Sbjct: 5107 cagcagcagcctagaagtccccaa 5084

>gb|AC159987.5| Mus musculus 10 BAC RP23-475N14 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 172772

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    aaaagaaaggggtcatgtat 56
             ||||||||||||||||||||
Sbjct: 44424 aaaagaaaggggtcatgtat 44443

>gb|AC069014.21|AC069014 Mus musculus 11 BAC RP23-278K23 (Roswell Park Cancer Institute Mouse
             BAC Library) complete sequence
          Length = 181557

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 100   caagcagcagcagcctggaagtccccaa 127
             |||||||||||||| | |||||||||||
Sbjct: 11209 caagcagcagcagcattgaagtccccaa 11182

>gb|AC073918.13|AC073918 Mus musculus 11 BAC RP23-362J7 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 195667

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 100   caagcagcagcagcctggaagtccccaa 127
             |||||||||||||| | |||||||||||
Sbjct: 14466 caagcagcagcagcattgaagtccccaa 14493

>gb|AC006466.3|AC006466 Homo sapiens BAC clone CTA-471E18 from 7p11.2-p21, complete sequence
          Length = 156880

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    gcagcagcagcctggaagtc 122
              ||||||||||||||||||||
Sbjct: 148118 gcagcagcagcctggaagtc 148099

>gb|AC087360.6| Homo sapiens chromosome 8, clone RP11-447G11, complete sequence
          Length = 96909

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    agaaaaagaaaggggtcatg 53
             ||||||||||||||||||||
Sbjct: 63580 agaaaaagaaaggggtcatg 63561

>emb|AL672015.7| Mouse DNA sequence from clone RP23-154O12 on chromosome X, complete
            sequence
          Length = 194287

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  gggcagcctctgctttagct 210
            ||||||||||||||||||||
Sbjct: 7039 gggcagcctctgctttagct 7058

>gb|AC006531.1|AC006531 Homo sapiens chromosome 16 clone 113K5, complete sequence
          Length = 167525

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    ccaaagtcaaactcatcatc 143
              ||||||||||||||||||||
Sbjct: 129480 ccaaagtcaaactcatcatc 129461

>gb|AC156271.5| Mus musculus 10 BAC RP24-317L8 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 191073

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    aaaagaaaggggtcatgtat 56
             ||||||||||||||||||||
Sbjct: 78483 aaaagaaaggggtcatgtat 78464

>gb|AC111107.18| Mus musculus chromosome 5, clone RP23-195P3, complete sequence
          Length = 203785

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    aagtccccaaagtcaaactc 137
              ||||||||||||||||||||
Sbjct: 199626 aagtccccaaagtcaaactc 199607

>gb|AC167242.4| Mus musculus BAC clone RP24-354I16 from chromosome 7, complete sequence
          Length = 202422

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   cagcagcagcctggaagtccccaa 127
             |||||||||||| |||||||||||
Sbjct: 76399 cagcagcagcctagaagtccccaa 76422

>emb|AL807811.9| Mouse DNA sequence from clone RP23-247I1 on chromosome 4, complete
              sequence
          Length = 249021

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    cagcagcctggaagtcccca 126
              ||||||||||||||||||||
Sbjct: 116236 cagcagcctggaagtcccca 116255

>emb|AL591466.8| Mouse DNA sequence from clone RP23-279L23 on chromosome 11, complete
             sequence
          Length = 239847

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 100   caagcagcagcagcctggaagtccccaa 127
             |||||||||||||| | |||||||||||
Sbjct: 48781 caagcagcagcagcattgaagtccccaa 48808

>dbj|AB040430.1| Homo sapiens AID gene for activation-induced cytidine deaminase,
            complete cds
          Length = 11204

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 148  cttccttgtttgctcttctctgct 171
            ||||| ||||||||||||||||||
Sbjct: 5660 cttccctgtttgctcttctctgct 5637


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,606,570
Number of Sequences: 3902068
Number of extensions: 4606570
Number of successful extensions: 88981
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88863
Number of HSP's gapped (non-prelim): 118
length of query: 367
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 345
effective length of database: 17,147,199,772
effective search space: 5915783921340
effective search space used: 5915783921340
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)