>NHR1_CAEEL (Q21878) Nuclear hormone receptor family member nhr-1|
          Length = 445

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +3

Query: 57  YINPQFNYTRPLLQSASLTVQAATVASLGSSSSMGADMPFPRVSR 191
           Y  P  N  R    S  +   AA+V+    SSSMG D  FP   R
Sbjct: 16  YGQPMVNSQRNEDPSMYMNGSAASVSHTNGSSSMGNDQKFPSYKR 60

>CCNA1_HUMAN (P78396) Cyclin-A1|
          Length = 465

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +3

Query: 27  VYLIGTGTT---LYINPQFNYTRPLLQSASLTVQAATVASLGS 146
           VY + TGT    L+    FN   P+L  +SL  Q+  ++SLG+
Sbjct: 161 VYEVDTGTLKSDLHFLLDFNTVSPMLVDSSLLSQSEDISSLGT 203


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,808,015
Number of Sequences: 219361
Number of extensions: 393907
Number of successful extensions: 1059
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)