>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0090F16, complete sequence
          Length = 147341

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 287   gtgagtggattgaagatgcgctgctcatcggactcgagcgccgcggcgaggcgcggccat 346
             ||||| || ||||||||||| || || |||||||| |||||||| || || |||||||||
Sbjct: 94212 gtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgccagccgcggccat 94153

                
Query: 347   atg 349
             |||
Sbjct: 94152 atg 94150

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                            
Query: 287      gtgagtggattgaagatgcgctgctcatcggactcgagcgccgcggcgaggcgcggccat 346
                ||||| || ||||||||||| || || |||||||| |||||||| || || |||||||||
Sbjct: 24728276 gtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgccagccgcggccat 24728335

                   
Query: 347      atg 349
                |||
Sbjct: 24728336 atg 24728338

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                            
Query: 287      gtgagtggattgaagatgcgctgctcatcggactcgagcgccgcggcgaggcgcggccat 346
                ||||| || ||||||||||| || || |||||||| |||||||| || || |||||||||
Sbjct: 25039946 gtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgccagccgcggccat 25040005

                   
Query: 347      atg 349
                |||
Sbjct: 25040006 atg 25040008

>gb|AC008540.6| Homo sapiens chromosome 19 clone CTC-496P20, complete sequence
          Length = 224931

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 48    catcattaatttcacaatcaaacactc 74
             ||||||||||||||| |||||||||||
Sbjct: 74078 catcattaatttcactatcaaacactc 74104

>gb|AF499596.1| Phthorimaea operculella granulovirus, complete genome
          Length = 119217

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 44    aatacatcattaatttcacaat 65
             ||||||||||||||||||||||
Sbjct: 10755 aatacatcattaatttcacaat 10776

>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09,
              complete sequence
          Length = 155525

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 324    gcgccgcggcgaggcgcggcc 344
              |||||||||||||||||||||
Sbjct: 144414 gcgccgcggcgaggcgcggcc 144394

>gb|AC135917.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0048K05, complete sequence
          Length = 104254

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 324   gcgccgcggcgaggcgcggcc 344
             |||||||||||||||||||||
Sbjct: 16575 gcgccgcggcgaggcgcggcc 16555

>gb|AC121767.3| Mus musculus BAC clone RP23-339E1 from chromosome 1, complete sequence
          Length = 184736

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     aatacatcattaatttcacaa 64
              |||||||||||||||||||||
Sbjct: 141915 aatacatcattaatttcacaa 141935

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 324      gcgccgcggcgaggcgcggcc 344
                |||||||||||||||||||||
Sbjct: 24630238 gcgccgcggcgaggcgcggcc 24630218

>dbj|BA000020.2| Nostoc sp. PCC 7120 plasmid pCC7120alpha DNA, complete genome
          Length = 408101

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 8      cacaaatgttgtagaaaatcc 28
              |||||||||||||||||||||
Sbjct: 200429 cacaaatgttgtagaaaatcc 200449

>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 49      atcattaatttcacaatcaa 68
               ||||||||||||||||||||
Sbjct: 1408869 atcattaatttcacaatcaa 1408850

>gb|AC114993.18| Mus musculus chromosome 5, clone RP23-42D10, complete sequence
          Length = 208968

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 84    ttacacagaanaagaaaatcaatcatt 110
             ||||| |||| ||||||||||||||||
Sbjct: 26598 ttacaaagaaaaagaaaatcaatcatt 26572

>ref|XM_477237.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 314  tcggactcgagcgccgcggcgaggcgcggccatatg 349
            ||||||||||||||||| || |  ||||||||||||
Sbjct: 1001 tcggactcgagcgccgccgccatccgcggccatatg 966

>gb|AC126938.2| Mus musculus BAC clone RP23-50I16 from chromosome 5, complete sequence
          Length = 187269

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    gagagacagagagtgcaaca 138
              ||||||||||||||||||||
Sbjct: 172410 gagagacagagagtgcaaca 172391

>emb|CR318644.8| Zebrafish DNA sequence from clone DKEYP-11H3 in linkage group 23,
             complete sequence
          Length = 92984

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   ttgcgcatgcaataggattt 213
             ||||||||||||||||||||
Sbjct: 17590 ttgcgcatgcaataggattt 17571

>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    cgaggccttgcatcccaagc 249
              ||||||||||||||||||||
Sbjct: 109504 cgaggccttgcatcccaagc 109523

>gb|AC110790.3| Homo sapiens BAC clone RP11-548L20 from 4, complete sequence
          Length = 123196

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    aaaatcaatcattcaaacct 117
             ||||||||||||||||||||
Sbjct: 62687 aaaatcaatcattcaaacct 62706

>emb|AL929087.4| Zebrafish DNA sequence from clone CH211-226M16 in linkage group 23
             Contains three novel genes and a CpG island, complete
             sequence
          Length = 205160

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    aaatcaatcattcaaacctc 118
             ||||||||||||||||||||
Sbjct: 53174 aaatcaatcattcaaacctc 53193

>gb|AC079232.7| Homo sapiens BAC clone RP11-360H22 from 4, complete sequence
          Length = 169281

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      ccacacaaatgttgtagaaa 24
              ||||||||||||||||||||
Sbjct: 149899 ccacacaaatgttgtagaaa 149918

>gb|AC011466.6| Homo sapiens chromosome 19 clone CTC-453G23, complete sequence
          Length = 167272

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     caaacctgaattacacagaa 93
              ||||||||||||||||||||
Sbjct: 161657 caaacctgaattacacagaa 161676

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 314     tcggactcgagcgccgcggcgaggcgcggccatatg 349
               ||||||||||||||||| || |  ||||||||||||
Sbjct: 8092472 tcggactcgagcgccgccgccatccgcggccatatg 8092437

>gb|AC008392.6|AC008392 Homo sapiens chromosome 19 clone CTC-241F20, complete sequence
          Length = 91842

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    caaacctgaattacacagaa 93
             ||||||||||||||||||||
Sbjct: 15374 caaacctgaattacacagaa 15355



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 74  caaacctgaattacacagaa 93
           ||||||||||||||||||||
Sbjct: 504 caaacctgaattacacagaa 523

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    gagcgccgcggcgaggcgcg 341
              ||||||||||||||||||||
Sbjct: 850338 gagcgccgcggcgaggcgcg 850319



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 320    tcgagcgccgcggcgaggcgcggc 343
              ||||||||||||||||| ||||||
Sbjct: 535227 tcgagcgccgcggcgagccgcggc 535250

>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_C08
          Length = 117923

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 314   tcggactcgagcgccgcggcgaggcgcggccatatg 349
             ||||||||||||||||| || |  ||||||||||||
Sbjct: 26244 tcggactcgagcgccgccgccatccgcggccatatg 26209

>gb|AC110254.11| Mus musculus chromosome 5, clone RP23-271B12, complete sequence
          Length = 181434

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 84     ttacacagaanaagaaaatcaatcatt 110
              ||||| |||| ||||||||||||||||
Sbjct: 126099 ttacaaagaaaaagaaaatcaatcatt 126073

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 321     cgagcgccgcggcgaggcgc 340
               ||||||||||||||||||||
Sbjct: 2764507 cgagcgccgcggcgaggcgc 2764526

>emb|AL833797.6| Mouse DNA sequence from clone RP23-89B11 on chromosome 2, complete
            sequence
          Length = 165400

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    acacaaatgttgtagaaaat 26
            ||||||||||||||||||||
Sbjct: 3837 acacaaatgttgtagaaaat 3818


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,047,851
Number of Sequences: 3902068
Number of extensions: 4047851
Number of successful extensions: 92381
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91874
Number of HSP's gapped (non-prelim): 507
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)