>gb|BT009450.1| Triticum aestivum clone wlmk8.pk0021.e3:fis, full insert mRNA
            sequence
          Length = 1587

 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                        
Query: 373  gtcactccccgtagaaggccttctcgaagcactgcaggtactcgggctccagcgcgaaca 432
            ||||||||||||||||| | | || |||||||||||||||||||||||||||||||||||
Sbjct: 1355 gtcactccccgtagaagacgtcctggaagcactgcaggtactcgggctccagcgcgaaca 1296

                                       
Query: 433  gcacggacacgccgtcgtccttgtcgg 459
             |||||  | |||||||||| ||||||
Sbjct: 1295 acacggcgatgccgtcgtccctgtcgg 1269

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                            
Query: 381      ccgtagaaggccttctcgaagcactgcaggtactcgggctccagcgcgaacagcacggac 440
                ||||||||||||||||| |||||||| | |||||| || || ||||||||||||||||||
Sbjct: 15197677 ccgtagaaggccttctcaaagcactggatgtactccggttcgagcgcgaacagcacggac 15197736

                      
Query: 441      acgccg 446
                ||||||
Sbjct: 15197737 acgccg 15197742



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 443      gccgtcgtccttgtcgggcgcctgcgtcac 472
                ||||||||||||||| ||||||||||||||
Sbjct: 15197751 gccgtcgtccttgtccggcgcctgcgtcac 15197780

>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1740_D06
          Length = 187410

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                         
Query: 381   ccgtagaaggccttctcgaagcactgcaggtactcgggctccagcgcgaacagcacggac 440
             ||||||||||||||||| |||||||| | |||||| || || ||||||||||||||||||
Sbjct: 91653 ccgtagaaggccttctcaaagcactggatgtactccggttcgagcgcgaacagcacggac 91712

                   
Query: 441   acgccg 446
             ||||||
Sbjct: 91713 acgccg 91718



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 443   gccgtcgtccttgtcgggcgcctgcgtcac 472
             ||||||||||||||| ||||||||||||||
Sbjct: 91727 gccgtcgtccttgtccggcgcctgcgtcac 91756

>dbj|AK101900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071B22, full
            insert sequence
          Length = 1707

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                        
Query: 381  ccgtagaaggccttctcgaagcactgcaggtactcgggctccagcgcgaacagcacggac 440
            ||||||||||||||||| |||||||| | |||||| || || ||||||||||||||||||
Sbjct: 1390 ccgtagaaggccttctcaaagcactggatgtactccggttcgagcgcgaacagcacggac 1331

                  
Query: 441  acgccg 446
            ||||||
Sbjct: 1330 acgccg 1325



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 443  gccgtcgtccttgtcgggcgcctgcgtcac 472
            ||||||||||||||| ||||||||||||||
Sbjct: 1316 gccgtcgtccttgtccggcgcctgcgtcac 1287

>dbj|AK058559.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D08, full
            insert sequence
          Length = 1706

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                        
Query: 381  ccgtagaaggccttctcgaagcactgcaggtactcgggctccagcgcgaacagcacggac 440
            ||||||||||||||||| |||||||| | |||||| || || ||||||||||||||||||
Sbjct: 1389 ccgtagaaggccttctcaaagcactggatgtactccggttcgagcgcgaacagcacggac 1330

                  
Query: 441  acgccg 446
            ||||||
Sbjct: 1329 acgccg 1324



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 443  gccgtcgtccttgtcgggcgcctgcgtcac 472
            ||||||||||||||| ||||||||||||||
Sbjct: 1315 gccgtcgtccttgtccggcgcctgcgtcac 1286

>gb|AY104442.1| Zea mays PCO096884 mRNA sequence
          Length = 1115

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                       
Query: 385 agaaggccttctcgaagcactgcaggtactcgggctccagcgcgaacagcacggacacgc 444
           ||||| ||||||| ||||||  |||||||||||||||||| | ||  |||||||  | ||
Sbjct: 864 agaagaccttctcaaagcacgacaggtactcgggctccagagagatgagcacggcgatgc 805

                        
Query: 445 cgtcgtccttgtc 457
           |||||||| ||||
Sbjct: 804 cgtcgtccctgtc 792

>emb|CR762496.7| Zebrafish DNA sequence from clone DKEY-212J2 in linkage group 21,
             complete sequence
          Length = 239780

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1     actccttttttcccttaaagaaa 23
             |||||||||||||||||||||||
Sbjct: 78460 actccttttttcccttaaagaaa 78482

>gb|AF077542.1| Caenorhabditis elegans cosmid Y57G7A, complete sequence
          Length = 44315

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 182   attttcatttagactttgtata 203
             ||||||||||||||||||||||
Sbjct: 22738 attttcatttagactttgtata 22759

>ref|NM_184824.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1353

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 329  catcactgccaccgccgccct 349
            |||||||||||||||||||||
Sbjct: 1291 catcactgccaccgccgccct 1271

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 329      catcactgccaccgccgccct 349
                |||||||||||||||||||||
Sbjct: 21943734 catcactgccaccgccgccct 21943754

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 327     cgcatcactgccaccgccgcc 347
               |||||||||||||||||||||
Sbjct: 1545004 cgcatcactgccaccgccgcc 1544984

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 329      catcactgccaccgccgccct 349
                |||||||||||||||||||||
Sbjct: 21936763 catcactgccaccgccgccct 21936783

>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete
             sequence
          Length = 127210

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 329   catcactgccaccgccgccct 349
             |||||||||||||||||||||
Sbjct: 65282 catcactgccaccgccgccct 65262

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 355     ggcgtcggtcgccggtcagt 374
               ||||||||||||||||||||
Sbjct: 1364565 ggcgtcggtcgccggtcagt 1364546

>ref|XM_646378.1| Entamoeba histolytica HM-1:IMSS TatD family deoxyribonuclease,
           putative (163.t00009) partial mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  aagaaagctattgaaatcat 37
           ||||||||||||||||||||
Sbjct: 169 aagaaagctattgaaatcat 188

>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    tggtcggcgtcggtcgccgg 369
              ||||||||||||||||||||
Sbjct: 301533 tggtcggcgtcggtcgccgg 301552

>gb|AC096768.3| Homo sapiens BAC clone RP11-722P15 from 4, complete sequence
          Length = 180430

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ggccaaatctgaggccattt 185
             ||||||||||||||||||||
Sbjct: 31793 ggccaaatctgaggccattt 31812

>emb|X90476.1|RNCSIENH R.norvegicus DNA for carbamoylphosphate synthetase I gene
          Length = 1007

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   actccttttttcccttaaagaaag 24
           ||||||||||||| ||||||||||
Sbjct: 715 actccttttttcctttaaagaaag 738

>emb|AL935169.6| Zebrafish DNA sequence from clone CH211-227E15, complete sequence
          Length = 158122

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   tatatctgtattattatgca 121
             ||||||||||||||||||||
Sbjct: 87131 tatatctgtattattatgca 87112


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,592,674
Number of Sequences: 3902068
Number of extensions: 3592674
Number of successful extensions: 67498
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67315
Number of HSP's gapped (non-prelim): 183
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)