ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart06f06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_194238.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1907 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Minus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 |||||||||||||||||| |||||| ||| | | ||||||||||||||| |||||| Sbjct: 1665 gcgccgacgtggacgtcgtggtctccgatgaatcggcgccagaaccagtgggacttccag 1606 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 1605 acgagcaccatctcctcgatggggacgttcttggtctcggggaggaagagggcgatgaag 1546 Query: 343 acggtcatgatcaccaccca 362 ||||||||||| || ||||| Sbjct: 1545 acggtcatgatgacgaccca 1526
>ref|XM_476381.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1395 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Minus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 |||||||||||||||||| |||||| ||| | | ||||||||||||||| |||||| Sbjct: 1123 gcgccgacgtggacgtcgtggtctccgatgaatcggcgccagaaccagtgggacttccag 1064 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 1063 acgagcaccatctcctcgatggggacgttcttggtctcggggaggaagagggcgatgaag 1004 Query: 343 acggtcatgatcaccaccca 362 ||||||||||| || ||||| Sbjct: 1003 acggtcatgatgacgaccca 984
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Plus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 |||||||||||||||||| |||||| ||| | | ||||||||||||||| |||||| Sbjct: 348473 gcgccgacgtggacgtcgtggtctccgatgaatcggcgccagaaccagtgggacttccag 348532 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 348533 acgagcaccatctcctcgatggggacgttcttggtctcggggaggaagagggcgatgaag 348592 Query: 343 acggtcatgatcaccaccca 362 ||||||||||| || ||||| Sbjct: 348593 acggtcatgatgacgaccca 348612 Score = 119 bits (60), Expect = 6e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 ||||||||||| ||||| |||| | ||| |||||| |||| ||||||| |||||| Sbjct: 22299850 gcgccgacgtgcacgtcctcgtcgcggatgaacctgccccagtaccagtgcgacttccag 22299909 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 22299910 acgagcaccatctcctcgatgggcacgttcttggtctccggcaggaagaaggcgacgaac 22299969 Query: 343 acggtcatgatcaccaccca 362 | ||||||||||||||||| Sbjct: 22299970 agcgtcatgatcaccaccca 22299989
>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1317D11 Length = 135043 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Plus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 |||||||||||||||||| |||||| ||| | | ||||||||||||||| |||||| Sbjct: 72711 gcgccgacgtggacgtcgtggtctccgatgaatcggcgccagaaccagtgggacttccag 72770 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 72771 acgagcaccatctcctcgatggggacgttcttggtctcggggaggaagagggcgatgaag 72830 Query: 343 acggtcatgatcaccaccca 362 ||||||||||| || ||||| Sbjct: 72831 acggtcatgatgacgaccca 72850
>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0617C02 Length = 135605 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Plus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 |||||||||||||||||| |||||| ||| | | ||||||||||||||| |||||| Sbjct: 100472 gcgccgacgtggacgtcgtggtctccgatgaatcggcgccagaaccagtgggacttccag 100531 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 100532 acgagcaccatctcctcgatggggacgttcttggtctcggggaggaagagggcgatgaag 100591 Query: 343 acggtcatgatcaccaccca 362 ||||||||||| || ||||| Sbjct: 100592 acggtcatgatgacgaccca 100611
>dbj|AK103047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117G08, full insert sequence Length = 1906 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Minus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 |||||||||||||||||| |||||| ||| | | ||||||||||||||| |||||| Sbjct: 1664 gcgccgacgtggacgtcgtggtctccgatgaatcggcgccagaaccagtgggacttccag 1605 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 1604 acgagcaccatctcctcgatggggacgttcttggtctcggggaggaagagggcgatgaag 1545 Query: 343 acggtcatgatcaccaccca 362 ||||||||||| || ||||| Sbjct: 1544 acggtcatgatgacgaccca 1525
>dbj|AK099079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001I07, full insert sequence Length = 1395 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Minus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 |||||||||||||||||| |||||| ||| | | ||||||||||||||| |||||| Sbjct: 1123 gcgccgacgtggacgtcgtggtctccgatgaatcggcgccagaaccagtgggacttccag 1064 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 1063 acgagcaccatctcctcgatggggacgttcttggtctcggggaggaagagggcgatgaag 1004 Query: 343 acggtcatgatcaccaccca 362 ||||||||||| || ||||| Sbjct: 1003 acggtcatgatgacgaccca 984
>dbj|AK061974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H12, full insert sequence Length = 1865 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Minus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 |||||||||||||||||| |||||| ||| | | ||||||||||||||| |||||| Sbjct: 1659 gcgccgacgtggacgtcgtggtctccgatgaatcggcgccagaaccagtgggacttccag 1600 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 1599 acgagcaccatctcctcgatggggacgttcttggtctcggggaggaagagggcgatgaag 1540 Query: 343 acggtcatgatcaccaccca 362 ||||||||||| || ||||| Sbjct: 1539 acggtcatgatgacgaccca 1520
>dbj|AB052885.1| Oryza sativa OsMST3 mRNA for monosaccharide transporter 3, complete cds Length = 1557 Score = 135 bits (68), Expect = 1e-28 Identities = 122/140 (87%) Strand = Plus / Minus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 |||||||||||||||||| |||||| ||| | | ||||||||||||||| |||||| Sbjct: 1523 gcgccgacgtggacgtcgtggtctccgatgaatcggcgccagaaccagtgggacttccag 1464 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||| |||||||||||||| || |||||||| |||||||| Sbjct: 1463 acgagcaccatctcctcgatggggacgttcttggtctcggggaggaagagggcgatgaag 1404 Query: 343 acggtcatgatcaccaccca 362 ||||||||||| || ||||| Sbjct: 1403 acggtcatgatgacgaccca 1384
>gb|AY683004.1| Zea mays monosaccharide transport protein 1 (MST1) mRNA, complete cds Length = 1770 Score = 131 bits (66), Expect = 2e-27 Identities = 93/102 (91%) Strand = Plus / Minus Query: 261 ccagaaccagtgtcccttccatacaagcaccatctcctcgatgggcacgttcttggtctc 320 ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1512 ccagaaccagtgtgacttccagacaagcaccatctcctcgatgggcacgttcttggtctc 1453 Query: 321 cggcaggaagagcgcgatgaaaacggtcatgatcaccaccca 362 |||||||||| |||||||| ||||||||||| || ||||| Sbjct: 1452 gggcaggaagaaggcgatgaagacggtcatgatgacgaccca 1411
>ref|XM_478702.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1593 Score = 119 bits (60), Expect = 6e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 ||||||||||| ||||| |||| | ||| |||||| |||| ||||||| |||||| Sbjct: 1526 gcgccgacgtgcacgtcctcgtcgcggatgaacctgccccagtaccagtgcgacttccag 1467 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 1466 acgagcaccatctcctcgatgggcacgttcttggtctccggcaggaagaaggcgacgaac 1407 Query: 343 acggtcatgatcaccaccca 362 | ||||||||||||||||| Sbjct: 1406 agcgtcatgatcaccaccca 1387
>gb|AY342322.1| Oryza sativa (japonica cultivar-group) monosaccharide transporter 6 (MST6) mRNA, complete cds Length = 1590 Score = 119 bits (60), Expect = 6e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 ||||||||||| ||||| |||| | ||| |||||| |||| ||||||| |||||| Sbjct: 1523 gcgccgacgtgcacgtcctcgtcgcggatgaacctgccccagtaccagtgcgacttccag 1464 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 1463 acgagcaccatctcctcgatgggcacgttcttggtctccggcaggaagaaggcgacgaac 1404 Query: 343 acggtcatgatcaccaccca 362 | ||||||||||||||||| Sbjct: 1403 agcgtcatgatcaccaccca 1384
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 119 bits (60), Expect = 6e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 223 gcgccgacgtggacgtcggcgtctccaatgtacctgcgccagaaccagtgtcccttccat 282 ||||||||||| ||||| |||| | ||| |||||| |||| ||||||| |||||| Sbjct: 105096 gcgccgacgtgcacgtcctcgtcgcggatgaacctgccccagtaccagtgcgacttccag 105155 Query: 283 acaagcaccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaa 342 || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 105156 acgagcaccatctcctcgatgggcacgttcttggtctccggcaggaagaaggcgacgaac 105215 Query: 343 acggtcatgatcaccaccca 362 | ||||||||||||||||| Sbjct: 105216 agcgtcatgatcaccaccca 105235
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 261 ccagaaccagtgtcccttccatacaagcaccatctcctcgatgggcacgttcttggtctc 320 |||||||||||| | |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 14838305 ccagaaccagtgcttcctccataggagcaccatctcctcgatgggcacgcccttggtctc 14838246 Query: 321 cggcaggaaga 331 ||||||||||| Sbjct: 14838245 cggcaggaaga 14838235 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaaacggtca 349 |||| ||||||||||| ||| |||||||||||||| ||||||||||| ||| |||||| Sbjct: 7166229 ccatgtcctcgatggggacgcccttggtctccggcacgaagagcgcgacgaaggcggtca 7166170 Query: 350 tg 351 || Sbjct: 7166169 tg 7166168 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 292 atctcctcgatgggcacgttcttggtctccggcagga 328 ||||||||||||||||| | ||||||||||||||||| Sbjct: 9313901 atctcctcgatgggcacctgcttggtctccggcagga 9313937
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 261 ccagaaccagtgtcccttccatacaagcaccatctcctcgatgggcacgttcttggtctc 320 |||||||||||| | |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 123694 ccagaaccagtgcttcctccataggagcaccatctcctcgatgggcacgcccttggtctc 123635 Query: 321 cggcaggaaga 331 ||||||||||| Sbjct: 123634 cggcaggaaga 123624
>dbj|AP005784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0014G10 Length = 164147 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 261 ccagaaccagtgtcccttccatacaagcaccatctcctcgatgggcacgttcttggtctc 320 |||||||||||| | |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 46644 ccagaaccagtgcttcctccataggagcaccatctcctcgatgggcacgcccttggtctc 46585 Query: 321 cggcaggaaga 331 ||||||||||| Sbjct: 46584 cggcaggaaga 46574
>dbj|AK065807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037F14, full insert sequence Length = 1850 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 261 ccagaaccagtgtcccttccatacaagcaccatctcctcgatgggcacgttcttggtctc 320 |||||||||||| | |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 1580 ccagaaccagtgcttcctccataggagcaccatctcctcgatgggcacgcccttggtctc 1521 Query: 321 cggcaggaaga 331 ||||||||||| Sbjct: 1520 cggcaggaaga 1510
>gb|L21752.1|SCFGLUTRAA Saccharum hybrid cultivar H65-7052 glucose transporter mRNA, partial cds Length = 1215 Score = 75.8 bits (38), Expect = 9e-11 Identities = 44/46 (95%) Strand = Plus / Minus Query: 286 agcaccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 766 agcaccatctcctcgatgggcacgcccttggtctccggcaggaaga 721
>gb|L21753.1|SCFGLUTRAB Saccharum hybrid cultivar H65-7052 glucose transporter mRNA, complete cds Length = 1726 Score = 75.8 bits (38), Expect = 9e-11 Identities = 44/46 (95%) Strand = Plus / Minus Query: 286 agcaccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1529 agcaccatctcctcgatgggcacgcccttggtctccggcaggaaga 1484
>gb|BT017862.1| Zea mays clone EL01N0511H04.c mRNA sequence Length = 929 Score = 73.8 bits (37), Expect = 3e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaagagcgcgatgaaaacggtcatga 352 |||||||||||||||||||||||||||||| |||||||||| Sbjct: 675 cttggtctccggcaggaagagcgcgatgaagacggtcatga 635
>gb|BT018728.1| Zea mays clone EL01N0519B06.d mRNA sequence Length = 2099 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 286 agcaccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 ||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 1769 agcaccatctcttcgatgggcacgcccttggtctccggcaggaaga 1724
>gb|AY106711.1| Zea mays PCO127614 mRNA sequence Length = 817 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 286 agcaccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 ||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 488 agcaccatctcttcgatgggcacgcccttggtctccggcaggaaga 443
>ref|XM_480356.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1743 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaagagcgcga 337 |||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 1525 catctcctcgatgggcacccccttcgtctccggcaggaagagcgcga 1479
>ref|XM_507147.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1120_C08.22 mRNA Length = 2059 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaagagcgcga 337 |||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 1525 catctcctcgatgggcacccccttcgtctccggcaggaagagcgcga 1479
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaagagcgcga 337 |||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 4576611 catctcctcgatgggcacccccttcgtctccggcaggaagagcgcga 4576565
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaagagcgcga 337 |||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 100459 catctcctcgatgggcacccccttcgtctccggcaggaagagcgcga 100413
>dbj|AK072269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008O22, full insert sequence Length = 1743 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaagagcgcga 337 |||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 1525 catctcctcgatgggcacccccttcgtctccggcaggaagagcgcga 1479
>dbj|AK070877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065C06, full insert sequence Length = 2059 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaagagcgcga 337 |||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 1525 catctcctcgatgggcacccccttcgtctccggcaggaagagcgcga 1479
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaaacggtca 349 |||| ||||||||||| ||| |||||||||||||| ||||||||||| ||| |||||| Sbjct: 18334 ccatgtcctcgatggggacgcccttggtctccggcacgaagagcgcgacgaaggcggtca 18275 Query: 350 tg 351 || Sbjct: 18274 tg 18273
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaaacggtca 349 |||| ||||||||||| ||| |||||||||||||| ||||||||||| ||| |||||| Sbjct: 118308 ccatgtcctcgatggggacgcccttggtctccggcacgaagagcgcgacgaaggcggtca 118249 Query: 350 tg 351 || Sbjct: 118248 tg 118247
>ref|XM_472688.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1065 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaagagcgcgatgaaaacggtcatga 352 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 954 cttggtctccggcaggaagacggcgatgaagacggtcatga 914
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaaga 331 ||||||||||||||| | |||||||||||| |||||||||| Sbjct: 6202288 catctcctcgatggggatgttcttggtctcgggcaggaaga 6202328 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaaga 331 |||||||||||||||||||| Sbjct: 5068282 cttggtctccggcaggaaga 5068263
>gb|AY342321.1| Oryza sativa (japonica cultivar-group) monosaccharide transporter 4 (MST4) mRNA, complete cds Length = 1548 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaaga 331 ||||||||||||||| | |||||||||||| |||||||||| Sbjct: 1440 catctcctcgatggggatgttcttggtctcgggcaggaaga 1400
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaagagcgcgatgaaaacggtcatga 352 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 17827 cttggtctccggcaggaagacggcgatgaagacggtcatga 17787 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaagagcgcgatgaa 341 |||||||||||| ||||| ||||||||||| Sbjct: 36164 cttggtctccgggaggaacagcgcgatgaa 36135
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaagagcgcgatgaaaacggtcatga 352 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 22575727 cttggtctccggcaggaagacggcgatgaagacggtcatga 22575687 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaagagcgcgatgaa 341 |||||||||||| ||||| ||||||||||| Sbjct: 22594064 cttggtctccgggaggaacagcgcgatgaa 22594035
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaaga 331 ||||||||||||||| | |||||||||||| |||||||||| Sbjct: 6201501 catctcctcgatggggatgttcttggtctcgggcaggaaga 6201541 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaaga 331 |||||||||||||||||||| Sbjct: 5067497 cttggtctccggcaggaaga 5067478
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaaga 331 ||||||||||||||| | |||||||||||| |||||||||| Sbjct: 40899 catctcctcgatggggatgttcttggtctcgggcaggaaga 40939
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaaga 331 ||||||||||||||| | |||||||||||| |||||||||| Sbjct: 15496 catctcctcgatggggatgttcttggtctcgggcaggaaga 15536
>dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1742_G01 Length = 154912 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 292 atctcctcgatgggcacgttcttggtctccggcagga 328 ||||||||||||||||| | ||||||||||||||||| Sbjct: 139192 atctcctcgatgggcacctgcttggtctccggcagga 139228
>dbj|AK108820.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-E11, full insert sequence Length = 1801 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaagagcgcgatgaaaacggtcatga 352 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 1607 cttggtctccggcaggaagacggcgatgaagacggtcatga 1567
>dbj|AK107018.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H05, full insert sequence Length = 1998 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 292 atctcctcgatgggcacgttcttggtctccggcagga 328 ||||||||||||||||| | ||||||||||||||||| Sbjct: 148 atctcctcgatgggcacctgcttggtctccggcagga 184
>dbj|AK102510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095G20, full insert sequence Length = 1284 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 292 atctcctcgatgggcacgttcttggtctccggcagga 328 ||||||||||||||||| | ||||||||||||||||| Sbjct: 922 atctcctcgatgggcacctgcttggtctccggcagga 886
>dbj|AK099306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140P21, full insert sequence Length = 1980 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaaga 331 ||||||||||||||| | |||||||||||| |||||||||| Sbjct: 1536 catctcctcgatggggatgttcttggtctcgggcaggaaga 1496
>dbj|AK069202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009G17, full insert sequence Length = 1998 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 291 catctcctcgatgggcacgttcttggtctccggcaggaaga 331 ||||||||||||||| | |||||||||||| |||||||||| Sbjct: 1532 catctcctcgatggggatgttcttggtctcgggcaggaaga 1492
>dbj|AK067346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106G10, full insert sequence Length = 2150 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 292 atctcctcgatgggcacgttcttggtctccggcagga 328 ||||||||||||||||| | ||||||||||||||||| Sbjct: 1786 atctcctcgatgggcacctgcttggtctccggcagga 1750
>dbj|AK063975.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B10, full insert sequence Length = 1532 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 292 atctcctcgatgggcacgttcttggtctccggcagga 328 ||||||||||||||||| | ||||||||||||||||| Sbjct: 1107 atctcctcgatgggcacctgcttggtctccggcagga 1071
>dbj|AB052883.1| Oryza sativa OsMST1 mRNA for monosaccharide transporter 1, complete cds Length = 1557 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaagagcgcgatgaaaacggtcatga 352 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 1446 cttggtctccggcaggaagacggcgatgaagacggtcatga 1406
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 292 atctcctcgatgggcacgttcttggtctccggcaggaag 330 |||||||| ||||||| |||||||||||| ||||||||| Sbjct: 12643200 atctcctctatgggcatgttcttggtctctggcaggaag 12643238 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||||||||||||| | |||||||||||||||||||| Sbjct: 21720207 ccatctcctcgatggggatccccttggtctccggcaggaaga 21720248
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 292 atctcctcgatgggcacgttcttggtctccggcaggaag 330 |||||||| ||||||| |||||||||||| ||||||||| Sbjct: 10229 atctcctctatgggcatgttcttggtctctggcaggaag 10267
>ref|XM_506838.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0046L23.14 mRNA Length = 1939 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 297 ctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaaacggtcatgatcac 356 |||||||||||| ||||||||||||||||| |||||| | ||| | ||||||| ||| Sbjct: 1539 ctcgatgggcacccccttggtctccggcaggaggagcgccacgaacgccgtcatgaccac 1480 Query: 357 caccca 362 |||||| Sbjct: 1479 caccca 1474
>ref|XM_466374.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1927 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 297 ctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaaacggtcatgatcac 356 |||||||||||| ||||||||||||||||| |||||| | ||| | ||||||| ||| Sbjct: 1544 ctcgatgggcacccccttggtctccggcaggaggagcgccacgaacgccgtcatgaccac 1485 Query: 357 caccca 362 |||||| Sbjct: 1484 caccca 1479
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 297 ctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaaacggtcatgatcac 356 |||||||||||| ||||||||||||||||| |||||| | ||| | ||||||| ||| Sbjct: 22021512 ctcgatgggcacccccttggtctccggcaggaggagcgccacgaacgccgtcatgaccac 22021453 Query: 357 caccca 362 |||||| Sbjct: 22021452 caccca 22021447
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046L23 Length = 100041 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 297 ctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaaacggtcatgatcac 356 |||||||||||| ||||||||||||||||| |||||| | ||| | ||||||| ||| Sbjct: 70134 ctcgatgggcacccccttggtctccggcaggaggagcgccacgaacgccgtcatgaccac 70075 Query: 357 caccca 362 |||||| Sbjct: 70074 caccca 70069
>dbj|AK121678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069H05, full insert sequence Length = 1940 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 297 ctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaaacggtcatgatcac 356 |||||||||||| ||||||||||||||||| |||||| | ||| | ||||||| ||| Sbjct: 1540 ctcgatgggcacccccttggtctccggcaggaggagcgccacgaacgccgtcatgaccac 1481 Query: 357 caccca 362 |||||| Sbjct: 1480 caccca 1475
>dbj|AK119890.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-A05, full insert sequence Length = 1927 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 297 ctcgatgggcacgttcttggtctccggcaggaagagcgcgatgaaaacggtcatgatcac 356 |||||||||||| ||||||||||||||||| |||||| | ||| | ||||||| ||| Sbjct: 1544 ctcgatgggcacccccttggtctccggcaggaggagcgccacgaacgccgtcatgaccac 1485 Query: 357 caccca 362 |||||| Sbjct: 1484 caccca 1479
>ref|XM_493721.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Minus Query: 294 ctcctcgatgggcacgttcttggtctccggcagga 328 ||||||||||||||| ||||||||||||||||| Sbjct: 1470 ctcctcgatgggcacccccttggtctccggcagga 1436
>gb|AF235098.3| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 81461 Score = 46.1 bits (23), Expect = 0.078 Identities = 23/23 (100%) Strand = Plus / Plus Query: 124 ggaaaaagaaagaagaagagcaa 146 ||||||||||||||||||||||| Sbjct: 47357 ggaaaaagaaagaagaagagcaa 47379
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Plus Query: 294 ctcctcgatgggcacgttcttggtctccggcagga 328 ||||||||||||||| ||||||||||||||||| Sbjct: 2154162 ctcctcgatgggcacccccttggtctccggcagga 2154196
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 46.1 bits (23), Expect = 0.078 Identities = 32/35 (91%) Strand = Plus / Plus Query: 294 ctcctcgatgggcacgttcttggtctccggcagga 328 ||||||||||||||| ||||||||||||||||| Sbjct: 13619 ctcctcgatgggcacccccttggtctccggcagga 13653
>ref|NM_197747.1| Oryza sativa (japonica cultivar-group) putative monosaccharide transporter (OSJNBa0042H09.10), mRNA Length = 1557 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Minus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||| ||| ||||||| ||||| |||||||||||||||| Sbjct: 1465 ccatctgctccatgggcagcttctttgtctccggcaggaaga 1424
>ref|NM_193582.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1539 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Minus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||||||||||||| | |||||||||||||||||||| Sbjct: 1450 ccatctcctcgatggggatccccttggtctccggcaggaaga 1409
>ref|XM_472689.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1524 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaagagcgcgatgaa 341 |||||||||||| ||||| ||||||||||| Sbjct: 1422 cttggtctccgggaggaacagcgcgatgaa 1393
>gb|AY643749.1| Oryza sativa (japonica cultivar-group) monosaccharide transporter 7 (MST7) mRNA, complete cds Length = 1539 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Minus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||||||||||||| | |||||||||||||||||||| Sbjct: 1450 ccatctcctcgatggggatccccttggtctccggcaggaaga 1409
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||| ||| ||||||| ||||| |||||||||||||||| Sbjct: 2165 ccatctgctccatgggcagcttctttgtctccggcaggaaga 2206
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Minus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||| ||| ||||||| ||||| |||||||||||||||| Sbjct: 39796 ccatctgctccatgggcagcttctttgtctccggcaggaaga 39755
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Minus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||| ||| ||||||| ||||| |||||||||||||||| Sbjct: 21607892 ccatctgctccatgggcagcttctttgtctccggcaggaaga 21607851
>gb|AC009750.7|AC009750 Drosophila melanogaster, chromosome 2L, region 23F-24A, BAC clone BACR15P13, complete sequence Length = 187049 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 cgcccttgccattgtttgcgcc 227 |||||||||||||||||||||| Sbjct: 32271 cgcccttgccattgtttgcgcc 32292
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||||||||||||| | |||||||||||||||||||| Sbjct: 72258 ccatctcctcgatggggatccccttggtctccggcaggaaga 72299
>dbj|AK121306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111J01, full insert sequence Length = 2260 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaagagcgcgatgaa 341 |||||||||||| ||||| ||||||||||| Sbjct: 1658 cttggtctccgggaggaacagcgcgatgaa 1629
>dbj|AK068343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148F21, full insert sequence Length = 1927 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Minus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||| ||| ||||||| ||||| |||||||||||||||| Sbjct: 1639 ccatctgctccatgggcagcttctttgtctccggcaggaaga 1598
>gb|AY104890.1| Zea mays PCO071167 mRNA sequence Length = 1683 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||| ||| ||||||| | |||||||||||||||||||| Sbjct: 1440 ccatctgctccatgggcagctgcttggtctccggcaggaaga 1481
>gb|AE003580.3| Drosophila melanogaster chromosome 2L, section 11 of 83 of the complete sequence Length = 286920 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 cgcccttgccattgtttgcgcc 227 |||||||||||||||||||||| Sbjct: 144933 cgcccttgccattgtttgcgcc 144954
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Minus Query: 290 ccatctcctcgatgggcacgttcttggtctccggcaggaaga 331 |||||| ||| ||||||| ||||| |||||||||||||||| Sbjct: 21619555 ccatctgctccatgggcagcttctttgtctccggcaggaaga 21619514
>gb|AC123822.4| Mus musculus BAC clone RP23-477F12 from chromosome 7, complete sequence Length = 179943 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 aaaaagaaagaagaagagcaa 146 ||||||||||||||||||||| Sbjct: 92065 aaaaagaaagaagaagagcaa 92085
>ref|XM_660024.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.60089) partial mRNA Length = 906 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gaaaaagaaagaagaagagca 145 ||||||||||||||||||||| Sbjct: 826 gaaaaagaaagaagaagagca 846
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 acgttcttggtctccggcaggaaga 331 ||||||||||| ||||||||||||| Sbjct: 244046 acgttcttggtttccggcaggaaga 244070
>emb|AJ243755.1|MMA243755 Methanosarcina mazei TFB gene for transcription factor B Length = 1014 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 aggcaggcttcggaaaaagaa 133 ||||||||||||||||||||| Sbjct: 814 aggcaggcttcggaaaaagaa 834
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 acgttcttggtctccggcaggaaga 331 ||||||||||||||||||| ||||| Sbjct: 5378579 acgttcttggtctccggcatgaaga 5378603
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 acgttcttggtctccggcaggaaga 331 |||||||||||||| |||||||||| Sbjct: 5166677 acgttcttggtctcgggcaggaaga 5166653
>gb|AC136003.10| Mus musculus chromosome 15, clone RP23-191C24, complete sequence Length = 214651 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 tcggaaaaagaaagaagaaga 142 ||||||||||||||||||||| Sbjct: 119740 tcggaaaaagaaagaagaaga 119720
>emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in linkage group 22, complete sequence Length = 159207 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 ggaagagcgcgatgaaaacgg 346 ||||||||||||||||||||| Sbjct: 110908 ggaagagcgcgatgaaaacgg 110928
>emb|BX539309.5| Mouse DNA sequence from clone RP23-475N16 on chromosome 7, complete sequence Length = 82140 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 aaaaagaaagaagaagagcaa 146 ||||||||||||||||||||| Sbjct: 9364 aaaaagaaagaagaagagcaa 9344
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 aggcaggcttcggaaaaagaa 133 ||||||||||||||||||||| Sbjct: 2116564 aggcaggcttcggaaaaagaa 2116584
>gb|AC115727.10| Mus musculus chromosome 3, clone RP23-30A13, complete sequence Length = 183826 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 tcttggtctccggcaggaag 330 |||||||||||||||||||| Sbjct: 72900 tcttggtctccggcaggaag 72919
>ref|NM_114517.2| Arabidopsis thaliana iron ion binding / isopenicillin-N synthase AT3G46500 mRNA, complete cds Length = 1212 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gaaaaagaaagaagaagagc 144 |||||||||||||||||||| Sbjct: 131 gaaaaagaaagaagaagagc 112
>ref|XM_629679.1| Dictyostelium discoideum hypothetical protein (DDB0219732), partial mRNA Length = 6390 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 aaaagaaagaagaagagcaattaa 150 ||||||||||||||||| |||||| Sbjct: 3209 aaaagaaagaagaagaggaattaa 3232
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggaaaaagaaagaagaagag 143 |||||||||||||||||||| Sbjct: 1076638 ggaaaaagaaagaagaagag 1076619
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 ctcctcgatgggcacgttct 313 |||||||||||||||||||| Sbjct: 18932 ctcctcgatgggcacgttct 18913
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gcttcggaaaaagaaagaag 138 |||||||||||||||||||| Sbjct: 1537594 gcttcggaaaaagaaagaag 1537575
>gb|AC096672.14| Trypanosoma brucei chromosome 4 clone RPCI93-24M18, complete sequence Length = 158627 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gcttcggaaaaagaaagaag 138 |||||||||||||||||||| Sbjct: 105789 gcttcggaaaaagaaagaag 105770
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 aaaaagaaagaagaagagca 145 |||||||||||||||||||| Sbjct: 3314933 aaaaagaaagaagaagagca 3314914
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gaaaaagaaagaagaagagc 144 |||||||||||||||||||| Sbjct: 1319893 gaaaaagaaagaagaagagc 1319912
>ref|XM_363202.1| Magnaporthe grisea 70-15 hypothetical protein (MG08786.4) partial cds Length = 1656 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaaga 331 |||||||||||||||||||| Sbjct: 756 cttggtctccggcaggaaga 737
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gaaaaagaaagaagaagagc 144 |||||||||||||||||||| Sbjct: 1297358 gaaaaagaaagaagaagagc 1297377
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gaaaaagaaagaagaagagc 144 |||||||||||||||||||| Sbjct: 1297304 gaaaaagaaagaagaagagc 1297323
>gb|AC006833.2| Caenorhabditis elegans cosmid ZK616, complete sequence Length = 35820 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggaaaaagaaagaagaagag 143 |||||||||||||||||||| Sbjct: 7569 ggaaaaagaaagaagaagag 7550
>ref|XM_568836.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB01680) partial mRNA Length = 3450 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 cggaaaaagaaagaagaaga 142 |||||||||||||||||||| Sbjct: 478 cggaaaaagaaagaagaaga 497
>ref|XM_649220.1| Entamoeba histolytica HM-1:IMSS CCR4/NOT complex transcription factor subunit 4 (57.t00010) partial mRNA Length = 2112 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 aaaagaaagaagaagagcaattaa 150 ||||||||||||||||| |||||| Sbjct: 1625 aaaagaaagaagaagaggaattaa 1648
>ref|XM_736454.1| Plasmodium chabaudi chabaudi transcriptional regulator, (PC000639.03.0) partial mRNA Length = 1149 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 aaaagaaagaagaagagcaattaa 150 ||||||||||||||||| |||||| Sbjct: 1126 aaaagaaagaagaagagaaattaa 1149
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gaaaaagaaagaagaagagc 144 |||||||||||||||||||| Sbjct: 1332700 gaaaaagaaagaagaagagc 1332719
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0064E16, from chromosome 3, complete sequence Length = 139123 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaaga 331 |||||||||||||||||||| Sbjct: 132736 cttggtctccggcaggaaga 132717
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 ggaaaaagaaagaagaagagcaat 147 ||||||| |||||||||||||||| Sbjct: 478053 ggaaaaaaaaagaagaagagcaat 478030
>emb|AJ715821.1| Alicyclobacillus acidocaldarius kdpDE and kdpZFABCN operon, type strain ATCC 27009 Length = 11667 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tctcctcgatgggcacgttc 312 |||||||||||||||||||| Sbjct: 11237 tctcctcgatgggcacgttc 11218
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cggaaaaagaaagaagaaga 142 |||||||||||||||||||| Sbjct: 500172 cggaaaaagaaagaagaaga 500153
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cttggtctccggcaggaaga 331 |||||||||||||||||||| Sbjct: 101425 cttggtctccggcaggaaga 101444
>ref|XM_627338.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_4520), partial mRNA Length = 6669 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 attaatgcaagaattaatct 56 |||||||||||||||||||| Sbjct: 3234 attaatgcaagaattaatct 3215
>emb|BX824298.1|CNS0A5O1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1213 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gaaaaagaaagaagaagagc 144 |||||||||||||||||||| Sbjct: 131 gaaaaagaaagaagaagagc 112
>emb|BX824790.1|CNS0A5HZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH72ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1402 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gaaaaagaaagaagaagagc 144 |||||||||||||||||||| Sbjct: 155 gaaaaagaaagaagaagagc 136
>dbj|AK103915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A02, full insert sequence Length = 2167 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaaga 331 |||||||||||||||||||| Sbjct: 1659 cttggtctccggcaggaaga 1640
>gb|AC153102.3| Sus scrofa clone RP44-33N10, complete sequence Length = 113400 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggaaaaagaaagaagaagag 143 |||||||||||||||||||| Sbjct: 101602 ggaaaaagaaagaagaagag 101583
>dbj|AK099273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058J16, full insert sequence Length = 2252 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaaga 331 |||||||||||||||||||| Sbjct: 1659 cttggtctccggcaggaaga 1640
>dbj|AK070417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F11, full insert sequence Length = 2300 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cttggtctccggcaggaaga 331 |||||||||||||||||||| Sbjct: 1660 cttggtctccggcaggaaga 1641
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gaaaaagaaagaagaagagc 144 |||||||||||||||||||| Sbjct: 1297235 gaaaaagaaagaagaagagc 1297254
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gaaaaagaaagaagaagagc 144 |||||||||||||||||||| Sbjct: 1453721 gaaaaagaaagaagaagagc 1453740
>emb|AL133314.1|ATF12A12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12A12 Length = 100815 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gaaaaagaaagaagaagagc 144 |||||||||||||||||||| Sbjct: 19712 gaaaaagaaagaagaagagc 19693 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,310,201 Number of Sequences: 3902068 Number of extensions: 3310201 Number of successful extensions: 82851 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81997 Number of HSP's gapped (non-prelim): 848 length of query: 362 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 340 effective length of database: 17,147,199,772 effective search space: 5830047922480 effective search space used: 5830047922480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
