ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart06f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475302.1| Oryza sativa (japonica cultivar-group), predic... 135 1e-28
2dbj|AK120229.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
3dbj|AK060776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 3e-26
4gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
5ref|XM_463883.1| Oryza sativa (japonica cultivar-group), mRNA 96 1e-16
6ref|XM_506686.1| PREDICTED Oryza sativa (japonica cultivar-group... 96 1e-16
7gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
9dbj|AK102022.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
10dbj|AK061815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
11gb|AY104079.1| Zea mays PCO134626 mRNA sequence 86 1e-13
12gb|BT019140.1| Zea mays clone Contig785.F mRNA sequence 78 3e-11
13ref|NM_126363.2| Arabidopsis thaliana D-alanyl-D-alanine endopep... 58 3e-05
14gb|AY114571.1| Arabidopsis thaliana unknown protein (At2g03120) ... 58 3e-05
15gb|AY065169.1| Arabidopsis thaliana unknown protein (At2g03120; ... 58 3e-05
16emb|BX820285.1|CNS0A8O7 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
17gb|AC175311.1| Medicago truncatula clone mth2-45n8, complete seq... 56 1e-04
18gb|AY445891.1| Galega orientalis signal peptide peptidase mRNA, ... 54 4e-04
19gb|AY087685.1| Arabidopsis thaliana clone 37655 mRNA, complete s... 50 0.006
20gb|AC138720.5| Mus musculus BAC clone RP23-192O12 from chromosom... 46 0.098
21gb|AY663385.1| Aedes aegypti voltage-dependent para-like sodium ... 44 0.39
22gb|AY663378.1| Aedes aegypti clone AEL2 voltage-dependent para-l... 44 0.39
23dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 44 0.39
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
25dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
26emb|AL808123.9| Mouse DNA sequence from clone RP23-73K21 on chro... 44 0.39
27ref|XM_512811.1| PREDICTED: Pan troglodytes similar to transient... 42 1.5
28ref|XM_592254.2| PREDICTED: Bos taurus similar to transient rece... 42 1.5
29ref|XM_541500.2| PREDICTED: Canis familiaris similar to transien... 42 1.5
30gb|AY297046.1| Homo sapiens transient receptor potential cation ... 42 1.5
31gb|AY297045.1| Homo sapiens transient receptor potential cation ... 42 1.5
32gb|AY297044.1| Homo sapiens transient receptor potential cation ... 42 1.5
33ref|NM_017636.2| Homo sapiens transient receptor potential catio... 42 1.5
34gb|AC008891.7| Homo sapiens chromosome 19 clone CTD-2226J19, com... 42 1.5
35gb|AF497623.1| Homo sapiens cation channel TRPM4B (TRPM4B) mRNA,... 42 1.5
36gb|AY046396.1| Homo sapiens TRP-related cation influx channel (T... 42 1.5
37emb|AJ575813.1|HSA575813 Homo sapiens mRNA for transient recepto... 42 1.5
38dbj|AK000048.1| Homo sapiens cDNA FLJ20041 fis, clone COL00423 42 1.5
39dbj|AK000235.1| Homo sapiens cDNA FLJ20228 fis, clone COLF5163 42 1.5
40gb|AF053765.1|AF053765 Bacillus megaterium AraC (araC) gene, par... 42 1.5
41gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 6.0
42gb|AC159309.2| Mus musculus BAC clone RP23-157H14 from chromosom... 40 6.0
43gb|AC099596.6| Mus musculus chromosome 15, clone RP23-26P23, com... 40 6.0
44gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
45gb|AC186002.3| Pan troglodytes BAC clone CH251-86D23 from chromo... 40 6.0
46ref|XM_416596.1| PREDICTED: Gallus gallus similar to coproporphy... 40 6.0
47gb|DQ377804.1|DQ377804S1 Squirrelpox virus 1296/99, partial genome 40 6.0
48gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 6.0
49gb|AC182459.3| Pan troglodytes BAC clone CH251-706C19 from chrom... 40 6.0
50gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, com... 40 6.0
51gb|AY386264.1| Orf virus strain OV-SA00, complete genome 40 6.0
52gb|AY386263.1| Orf virus strain OV-IA82, complete genome 40 6.0
53ref|XM_753565.1| Ustilago maydis 521 hypothetical protein (UM025... 40 6.0
54ref|XM_650676.1| Entamoeba histolytica HM-1:IMSS Rap/Ran GTPase ... 40 6.0
55ref|XM_536475.2| PREDICTED: Canis familiaris similar to Follista... 40 6.0
56gb|AC166568.2| Spironucleus vortens clone JGIBAWF-9N8, complete ... 40 6.0
57emb|CR759789.8| Zebrafish DNA sequence from clone CH211-153M1, c... 40 6.0
58emb|AL772307.15| Human DNA sequence from clone RP11-416B15 on ch... 40 6.0
59emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on ch... 40 6.0
60emb|AL772155.6| Human DNA sequence from clone RP11-149F8 on chro... 40 6.0
61emb|AL591438.6| Human DNA sequence from clone RP11-452D2 on chro... 40 6.0
62emb|AL591479.3| Human DNA sequence from clone RP11-154P18 on chr... 40 6.0
63emb|AL354718.10| Human DNA sequence from clone RP11-187C18 on ch... 40 6.0
64ref|XM_965065.1| PREDICTED: Tribolium castaneum similar to mesod... 40 6.0
65emb|AL592220.6| Human DNA sequence from clone RP11-12P21 on chro... 40 6.0
66gb|DQ184476.1| Orf virus strain NZ2, complete genome 40 6.0
67emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chr... 40 6.0
68ref|XM_627058.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 6.0
69gb|AC096711.2| Homo sapiens BAC clone RP11-1E22 from 4, complete... 40 6.0
70gb|AF065879.1|AF065879 Nicotiana tabacum matrix attachment regio... 40 6.0
71gb|AC145250.3| Macropus eugenii clone ME_KBa-232I1, complete seq... 40 6.0
72emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chr... 40 6.0
73emb|AL162252.17| Human DNA sequence from clone RP11-55J24 on chr... 40 6.0
74emb|AL805897.13| Mouse DNA sequence from clone RP23-63D8 on chro... 40 6.0
75emb|AL807823.6| Mouse DNA sequence from clone RP23-328E6 on chro... 40 6.0
76gb|AC168048.3| Mus musculus BAC clone RP24-335I13 from chromosom... 40 6.0
77emb|AL627068.9| Mouse DNA sequence from clone RP23-409D7 on chro... 40 6.0 
>ref|XM_475302.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 852

 Score =  135 bits (68), Expect = 1e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                       
Query: 320 agcggttttacttcaccattccacaaagagtgaacagccacaaaaccagtcacgccggga 379
           ||||| ||||||||||||||||||||| |||||||||| ||||||||| |||| || |||
Sbjct: 767 agcggctttacttcaccattccacaaacagtgaacagcaacaaaaccaatcacaccagga 708

                                                                   
Query: 380 acgatgtataacagagcaggctatgcagcttgaaaccagttcatcacaactattgt 435
           || ||||| ||||||||||||| ||||||||| |||||||||||||| | ||||||
Sbjct: 707 acaatgtacaacagagcaggctgtgcagcttggaaccagttcatcactattattgt 652
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>dbj|AK120229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043A06, full
            insert sequence
          Length = 2119

 Score =  131 bits (66), Expect = 2e-27
 Identities = 99/110 (90%)
 Strand = Plus / Minus

                                                                        
Query: 326  tttacttcaccattccacaaagagtgaacagccacaaaaccagtcacgccgggaacgatg 385
            ||||||||||||||||||||| |||||||||| ||||||||| |||| || ||||| |||
Sbjct: 1654 tttacttcaccattccacaaacagtgaacagcaacaaaaccaatcacaccaggaacaatg 1595

                                                              
Query: 386  tataacagagcaggctatgcagcttgaaaccagttcatcacaactattgt 435
            || ||||||||||||| ||||||||| |||||||||||||| | ||||||
Sbjct: 1594 tacaacagagcaggctgtgcagcttggaaccagttcatcactattattgt 1545
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>dbj|AK060776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B12, full
           insert sequence
          Length = 1065

 Score =  127 bits (64), Expect = 3e-26
 Identities = 103/116 (88%)
 Strand = Plus / Minus

                                                                       
Query: 320 agcggttttacttcaccattccacaaagagtgaacagccacaaaaccagtcacgccggga 379
           ||||| ||||||||||||||||||||| |||||||||| ||||||||| |||| || |||
Sbjct: 776 agcggctttacttcaccattccacaaacagtgaacagcaacaaaaccaatcacaccagga 717

                                                                   
Query: 380 acgatgtataacagagcaggctatgcagcttgaaaccagttcatcacaactattgt 435
           || ||||| ||||||||||||| ||||||||| |||||||||| ||| | ||||||
Sbjct: 716 acaatgtacaacagagcaggctgtgcagcttggaaccagttcaccactattattgt 661
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>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05,
             complete sequence
          Length = 109126

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                         
Query: 326   tttacttcaccattccacaaagagtgaacagccacaaaaccagtcacgccgggaacgatg 385
             ||||||||||||||||||||| |||||||||| ||||||||| |||| || ||||| |||
Sbjct: 17534 tttacttcaccattccacaaacagtgaacagcaacaaaaccaatcacaccaggaacaatg 17475

                             
Query: 386   tataacagagcaggct 401
             || |||||||||||||
Sbjct: 17474 tacaacagagcaggct 17459



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 403   tgcagcttgaaaccagttcatcacaactattgt 435
             ||||||||| |||||||||||||| | ||||||
Sbjct: 17073 tgcagcttggaaccagttcatcactattattgt 17041
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>ref|XM_463883.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1619

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                        
Query: 329  acttcaccattccacaaagagtgaacagccacaaaaccagtcacgccgggaacgatgtat 388
            ||||| |||||||| ||| |||||||||| ||||||||| |||| || ||||| ||||| 
Sbjct: 1216 acttctccattccataaacagtgaacagcaacaaaaccaatcacaccaggaacaatgtac 1157

                                                    
Query: 389  aacagagcaggctatgcagcttgaaaccagttcatcacaa 428
            || || ||||||| ||| ||||||||||||||||||||||
Sbjct: 1156 aagagggcaggctgtgcggcttgaaaccagttcatcacaa 1117
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>ref|XM_506686.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1442_E05.26 mRNA
          Length = 1622

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                        
Query: 329  acttcaccattccacaaagagtgaacagccacaaaaccagtcacgccgggaacgatgtat 388
            ||||| |||||||| ||| |||||||||| ||||||||| |||| || ||||| ||||| 
Sbjct: 1217 acttctccattccataaacagtgaacagcaacaaaaccaatcacaccaggaacaatgtac 1158

                                                    
Query: 389  aacagagcaggctatgcagcttgaaaccagttcatcacaa 428
            || || ||||||| ||| ||||||||||||||||||||||
Sbjct: 1157 aagagggcaggctgtgcggcttgaaaccagttcatcacaa 1118
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>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0088F07,
              complete sequence
          Length = 139180

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                          
Query: 326    tttacttcaccattccacaaagagtgaacagccacaaaaccagtcacgccgggaacgatg 385
              ||||||||||||||||||||| |||||||||| ||||||||| |||| || ||||| |||
Sbjct: 111711 tttacttcaccattccacaaacagtgaacagcaacaaaaccaatcacaccaggaacaatg 111652

                              
Query: 386    tataacagagcaggct 401
              || |||||||||||||
Sbjct: 111651 tacaacagagcaggct 111636



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 403    tgcagcttgaaaccagttcatcacaactattgt 435
              ||||||||| |||||||||||||| | ||||||
Sbjct: 111250 tgcagcttggaaccagttcatcactattattgt 111218
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 326      tttacttcaccattccacaaagagtgaacagccacaaaaccagtcacgccgggaacgatg 385
                ||||||||||||||||||||| |||||||||| ||||||||| |||| || ||||| |||
Sbjct: 21230928 tttacttcaccattccacaaacagtgaacagcaacaaaaccaatcacaccaggaacaatg 21230869

                                
Query: 386      tataacagagcaggct 401
                || |||||||||||||
Sbjct: 21230868 tacaacagagcaggct 21230853



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 403      tgcagcttgaaaccagttcatcacaactattgt 435
                ||||||||| |||||||||||||| | ||||||
Sbjct: 21230467 tgcagcttggaaccagttcatcactattattgt 21230435



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 263      tcctcttcttcctcggcggc 282
                ||||||||||||||||||||
Sbjct: 19480462 tcctcttcttcctcggcggc 19480481
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>dbj|AK102022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080J11, full
            insert sequence
          Length = 1618

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                        
Query: 329  acttcaccattccacaaagagtgaacagccacaaaaccagtcacgccgggaacgatgtat 388
            ||||| |||||||| ||| |||||||||| ||||||||| |||| || ||||| ||||| 
Sbjct: 1215 acttctccattccataaacagtgaacagcaacaaaaccaatcacaccaggaacaatgtac 1156

                                                    
Query: 389  aacagagcaggctatgcagcttgaaaccagttcatcacaa 428
            || || ||||||| ||| ||||||||||||||||||||||
Sbjct: 1155 aagagggcaggctgtgcggcttgaaaccagttcatcacaa 1116
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>dbj|AK061815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B05, full
            insert sequence
          Length = 1622

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                        
Query: 329  acttcaccattccacaaagagtgaacagccacaaaaccagtcacgccgggaacgatgtat 388
            ||||| |||||||| ||| |||||||||| ||||||||| |||| || ||||| ||||| 
Sbjct: 1217 acttctccattccataaacagtgaacagcaacaaaaccaatcacaccaggaacaatgtac 1158

                                                    
Query: 389  aacagagcaggctatgcagcttgaaaccagttcatcacaa 428
            || || ||||||| ||| ||||||||||||||||||||||
Sbjct: 1157 aagagggcaggctgtgcggcttgaaaccagttcatcacaa 1118
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>gb|AY104079.1| Zea mays PCO134626 mRNA sequence
          Length = 1592

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Minus

                                                                        
Query: 311  aactccaatagcggttttacttcaccattccacaaagagtgaacagccacaaaaccagtc 370
            ||||||| |||| |||| ||||| |||| ||||| | || ||||||| ||||||||| ||
Sbjct: 1263 aactccagtagctgtttcacttctccataccacagacagggaacagcgacaaaaccaatc 1204

                                                                       
Query: 371  acgccgggaacgatgtataacagagcaggctatgcagcttgaaaccagttcatcacaac 429
            || || ||||| | |||||  |||||||||| ||| ||||||||||||||||| |||||
Sbjct: 1203 acaccaggaacaaggtatagtagagcaggctgtgccgcttgaaaccagttcattacaac 1145
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>gb|BT019140.1| Zea mays clone Contig785.F mRNA sequence
          Length = 962

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                       
Query: 311 aactccaatagcggttttacttcaccattccacaaagagtgaacagccacaaaaccagtc 370
           ||||||| |||| |||| ||||| |||| ||||| | || ||||||| ||||||||| ||
Sbjct: 540 aactccagtagctgtttcacttctccataccacagacagggaacagcgacaaaaccaatc 481

                                                                      
Query: 371 acgccgggaacgatgtataacagagcaggctatgcagcttgaaaccagttcatcacaac 429
           || || ||||| | |||||  ||||||||||  || ||||||||||||||||| |||||
Sbjct: 480 acaccaggaacaaggtatagtagagcaggctgcgccgcttgaaaccagttcattacaac 422
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>ref|NM_126363.2| Arabidopsis thaliana D-alanyl-D-alanine endopeptidase AT2G03120 mRNA,
            complete cds
          Length = 1397

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 383  atgtataacagagcaggctatgcagcttgaaaccagttcat 423
            |||||||||| |||||||| ||| |||||||||||||||||
Sbjct: 1016 atgtataacaaagcaggctgtgctgcttgaaaccagttcat 976
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>gb|AY114571.1| Arabidopsis thaliana unknown protein (At2g03120) mRNA, complete cds
          Length = 1155

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 383 atgtataacagagcaggctatgcagcttgaaaccagttcat 423
           |||||||||| |||||||| ||| |||||||||||||||||
Sbjct: 884 atgtataacaaagcaggctgtgctgcttgaaaccagttcat 844
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>gb|AY065169.1| Arabidopsis thaliana unknown protein (At2g03120; T18E12.21) mRNA,
            complete cds
          Length = 1376

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 383  atgtataacagagcaggctatgcagcttgaaaccagttcat 423
            |||||||||| |||||||| ||| |||||||||||||||||
Sbjct: 1017 atgtataacaaagcaggctgtgctgcttgaaaccagttcat 977
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>emb|BX820285.1|CNS0A8O7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH18ZD07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1338

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 383 atgtataacagagcaggctatgcagcttgaaaccagttcat 423
           |||||||||| |||||||| ||| |||||||||||||||||
Sbjct: 970 atgtataacaaagcaggctgtgctgcttgaaaccagttcat 930
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>gb|AC175311.1| Medicago truncatula clone mth2-45n8, complete sequence
          Length = 94425

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 404   gcagcttgaaaccagttcatcacaactattgt 435
             ||||||||||||||||||||||||| ||||||
Sbjct: 16215 gcagcttgaaaccagttcatcacaaatattgt 16246
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>gb|AY445891.1| Galega orientalis signal peptide peptidase mRNA, partial cds
          Length = 633

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 405 cagcttgaaaccagttcatcacaactattgt 435
           |||| ||||||||||||||||||||||||||
Sbjct: 326 cagcctgaaaccagttcatcacaactattgt 296
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>gb|AY087685.1| Arabidopsis thaliana clone 37655 mRNA, complete sequence
          Length = 1356

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 387 ataacagagcaggctatgcagcttgaaaccagttcat 423
           |||||| |||||||| ||| |||||||||||||||||
Sbjct: 996 ataacaaagcaggctgtgctgcttgaaaccagttcat 960
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>gb|AC138720.5| Mus musculus BAC clone RP23-192O12 from chromosome 3, complete sequence
          Length = 191825

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 199   aaagaccagagcccagctggagc 221
             |||||||||||||||||||||||
Sbjct: 83079 aaagaccagagcccagctggagc 83101
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>gb|AY663385.1| Aedes aegypti voltage-dependent para-like sodium channel mRNA,
            partial cds, alternatively spliced
          Length = 6317

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 267  cttcttcctcggcggctccctcctcttcgg 296
            ||||||||||||||||  ||||||||||||
Sbjct: 1150 cttcttcctcggcggcctcctcctcttcgg 1121
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>gb|AY663378.1| Aedes aegypti clone AEL2 voltage-dependent para-like sodium channel
           mRNA, partial cds, alternatively spliced
          Length = 1590

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 267 cttcttcctcggcggctccctcctcttcgg 296
           ||||||||||||||||  ||||||||||||
Sbjct: 193 cttcttcctcggcggcctcctcctcttcgg 164
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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 269    tcttcctcggcggctccctcctcttc 294
              ||||||||||| ||||||||||||||
Sbjct: 221307 tcttcctcggctgctccctcctcttc 221282
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 407    gcttgaaaccagttcatcacaa 428
              ||||||||||||||||||||||
Sbjct: 909858 gcttgaaaccagttcatcacaa 909837
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>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1442_E05
          Length = 162407

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 407    gcttgaaaccagttcatcacaa 428
              ||||||||||||||||||||||
Sbjct: 119066 gcttgaaaccagttcatcacaa 119045
to top
>emb|AL808123.9| Mouse DNA sequence from clone RP23-73K21 on chromosome 2, complete
             sequence
          Length = 158637

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 151   atttgaaatcctgctttggtttggtt 176
             |||| |||||||||||||||||||||
Sbjct: 15680 attttaaatcctgctttggtttggtt 15705
to top
>ref|XM_512811.1| PREDICTED: Pan troglodytes similar to transient receptor potential
           cation channel, subfamily M, member 4 (LOC456197), mRNA
          Length = 2289

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 260 tcttcctcttcttcctcggcg 280
           |||||||||||||||||||||
Sbjct: 674 tcttcctcttcttcctcggcg 694
to top
>ref|XM_592254.2| PREDICTED: Bos taurus similar to transient receptor potential cation
            channel, subfamily M, member 4 (LOC514408), mRNA
          Length = 2194

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 1001 tcttcctcttcttcctcggcg 1021
to top
>ref|XM_541500.2| PREDICTED: Canis familiaris similar to transient receptor potential
            cation channel, subfamily M, member 4 (LOC484385), mRNA
          Length = 3804

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 2789 tcttcctcttcttcctcggcg 2809
to top
>gb|AY297046.1| Homo sapiens transient receptor potential cation channel subfamily M
            member 4 splice variant C (TRPM4) mRNA, complete cds;
            alternatively spliced
          Length = 3444

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 2412 tcttcctcttcttcctcggcg 2432
to top
>gb|AY297045.1| Homo sapiens transient receptor potential cation channel subfamily M
            member 4 splice variant B (TRPM4) mRNA, complete cds;
            alternatively spliced
          Length = 3879

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 2847 tcttcctcttcttcctcggcg 2867
to top
>gb|AY297044.1| Homo sapiens transient receptor potential cation channel subfamily M
            member 4 splice variant A (TRPM4) mRNA, complete cds;
            alternatively spliced
          Length = 3523

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 2491 tcttcctcttcttcctcggcg 2511
to top
>ref|NM_017636.2| Homo sapiens transient receptor potential cation channel, subfamily
            M, member 4 (TRPM4), mRNA
          Length = 4061

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 2867 tcttcctcttcttcctcggcg 2887
to top
>gb|AC008891.7| Homo sapiens chromosome 19 clone CTD-2226J19, complete sequence
          Length = 117628

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   tcttcctcttcttcctcggcg 280
             |||||||||||||||||||||
Sbjct: 63321 tcttcctcttcttcctcggcg 63301
to top
>gb|AF497623.1| Homo sapiens cation channel TRPM4B (TRPM4B) mRNA, complete cds
          Length = 4061

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 2867 tcttcctcttcttcctcggcg 2887
to top
>gb|AY046396.1| Homo sapiens TRP-related cation influx channel (TRPM4) mRNA, complete
            cds
          Length = 3701

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 2495 tcttcctcttcttcctcggcg 2515
to top
>emb|AJ575813.1|HSA575813 Homo sapiens mRNA for transient receptor potential ion channel
            melastatin subgroup member 4 protein (TRPM4 gene)
          Length = 4042

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 2836 tcttcctcttcttcctcggcg 2856
to top
>dbj|AK000048.1| Homo sapiens cDNA FLJ20041 fis, clone COL00423
          Length = 3810

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 2596 tcttcctcttcttcctcggcg 2616
to top
>dbj|AK000235.1| Homo sapiens cDNA FLJ20228 fis, clone COLF5163
          Length = 2981

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 260  tcttcctcttcttcctcggcg 280
            |||||||||||||||||||||
Sbjct: 1759 tcttcctcttcttcctcggcg 1779
to top
>gb|AF053765.1|AF053765 Bacillus megaterium AraC (araC) gene, partial cds; gas vesicle
           proteins GvpU (gvpU), GvpT (gvpT), GvpJ (gvpJ), GvpK
           (gvpK), GvpS (gvpS), GvpL (gvpL), GvpG (gvpG), GvpF
           (gvpF), GvpN (gvpN), GvpR (gvpR), GvpB (gvpB), GvpQ
           (gvpQ), GvpP (gvpP), and GvpA (gvpA) genes, complete
           cds; and unknown gene
          Length = 8142

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 gaatcttcctcttcttcctcg 277
           |||||||||||||||||||||
Sbjct: 814 gaatcttcctcttcttcctcg 834
to top
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     ggattatggtgcaagttttt 36
              ||||||||||||||||||||
Sbjct: 889216 ggattatggtgcaagttttt 889235
to top
>gb|AC159309.2| Mus musculus BAC clone RP23-157H14 from chromosome 16, complete
             sequence
          Length = 201546

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   ctatttgaaatcctgctttg 168
             ||||||||||||||||||||
Sbjct: 74807 ctatttgaaatcctgctttg 74788
to top
>gb|AC099596.6| Mus musculus chromosome 15, clone RP23-26P23, complete sequence
          Length = 210022

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    caaagagttctatcattttt 127
              ||||||||||||||||||||
Sbjct: 140985 caaagagttctatcattttt 140966
to top
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   tcctcttcttcctcggcggc 282
             ||||||||||||||||||||
Sbjct: 81174 tcctcttcttcctcggcggc 81193
to top
>gb|AC186002.3| Pan troglodytes BAC clone CH251-86D23 from chromosome 9, complete
              sequence
          Length = 162651

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    tacagtctatttgaaatcct 162
              ||||||||||||||||||||
Sbjct: 112831 tacagtctatttgaaatcct 112812
to top
>ref|XM_416596.1| PREDICTED: Gallus gallus similar to coproporphyrinogen oxidase;
           coproporphyrinogen oxidase (coproporphyria,
           harderoporphyria) (LOC418377), mRNA
          Length = 1664

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 260 tcttcctcttcttcctcggc 279
           ||||||||||||||||||||
Sbjct: 218 tcttcctcttcttcctcggc 199
to top
>gb|DQ377804.1|DQ377804S1 Squirrelpox virus 1296/99, partial genome
          Length = 25260

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   tcttcctcttcttcctcggc 279
             ||||||||||||||||||||
Sbjct: 23353 tcttcctcttcttcctcggc 23372
to top
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 412    aaaccagttcatcacaactattgt 435
              ||||||||||||||||||| ||||
Sbjct: 502377 aaaccagttcatcacaactgttgt 502354
to top
>gb|AC182459.3| Pan troglodytes BAC clone CH251-706C19 from chromosome 4, complete
              sequence
          Length = 166951

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    tacagtctatttgaaatcct 162
              ||||||||||||||||||||
Sbjct: 110173 tacagtctatttgaaatcct 110154
to top
>gb|AC101902.9| Mus musculus chromosome 1, clone RP24-147M23, complete sequence
          Length = 223784

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    ctggaatcttcctcttcttc 273
              ||||||||||||||||||||
Sbjct: 164043 ctggaatcttcctcttcttc 164024
to top
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome
          Length = 139962

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    tcctcttcttcctcggcggc 282
              ||||||||||||||||||||
Sbjct: 126275 tcctcttcttcctcggcggc 126256
to top
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome
          Length = 137241

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    tcctcttcttcctcggcggc 282
              ||||||||||||||||||||
Sbjct: 125222 tcctcttcttcctcggcggc 125203
to top
>ref|XM_753565.1| Ustilago maydis 521 hypothetical protein (UM02511.1) partial mRNA
          Length = 3942

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 260  tcttcctcttcttcctcggc 279
            ||||||||||||||||||||
Sbjct: 1943 tcttcctcttcttcctcggc 1962
to top
>ref|XM_650676.1| Entamoeba histolytica HM-1:IMSS Rap/Ran GTPase activating protein
            (23.t00011) partial mRNA
          Length = 4023

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   ccaaaacaaatagttaatga 97
            ||||||||||||||||||||
Sbjct: 2914 ccaaaacaaatagttaatga 2933
to top
>ref|XM_536475.2| PREDICTED: Canis familiaris similar to Follistatin precursor (FS)
            (Activin-binding protein) (LOC479336), mRNA
          Length = 1142

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  atcttcctcttcttcctcgg 278
            ||||||||||||||||||||
Sbjct: 1017 atcttcctcttcttcctcgg 998
to top
>gb|AC166568.2| Spironucleus vortens clone JGIBAWF-9N8, complete sequence
          Length = 38345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   cttcctcttcttcctcggcg 280
             ||||||||||||||||||||
Sbjct: 28430 cttcctcttcttcctcggcg 28411
to top
>emb|CR759789.8| Zebrafish DNA sequence from clone CH211-153M1, complete sequence
          Length = 165831

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    tcatcacaactattgttgct 439
              ||||||||||||||||||||
Sbjct: 139316 tcatcacaactattgttgct 139335
to top
>emb|AL772307.15| Human DNA sequence from clone RP11-416B15 on chromosome 9 Contains a
              pseudogene similar to part of ribosomal protein L7a (RPL7A)
              and a CpG island, complete sequence
          Length = 161380

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    tacagtctatttgaaatcct 162
              ||||||||||||||||||||
Sbjct: 110895 tacagtctatttgaaatcct 110914
to top
>emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on chromosome 9 Contains
            three novel pseudogenes, a pseudogene similar to part of
            meprin A, alpha (PABA peptide hydrolase) (MEP1A), a
            pseudogene similar to part of G protein-coupled receptor
            116 (GPR116), two novel genes, the 5' end of a novel gene
            similar to ankyrin repeat domain 20A (ANKRD20A) and three
            CpG islands, complete sequence
          Length = 165886

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  tacagtctatttgaaatcct 162
            ||||||||||||||||||||
Sbjct: 7109 tacagtctatttgaaatcct 7128
to top
>emb|AL772155.6| Human DNA sequence from clone RP11-149F8 on chromosome 9 Contains a novel
              gene, two novel pseudogenes, a  pseudogene similar to part
              of myosin V family protein, a tumor suppressor deleted in
              oral cancer-related 1 (DOC-1R) pseudogene, a pseudogene
              similar to part of prostaglandin E receptor 4 (subtype EP4)
              (PTGER4) and a CpG island, complete sequence
          Length = 163569

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    tacagtctatttgaaatcct 162
              ||||||||||||||||||||
Sbjct: 104443 tacagtctatttgaaatcct 104424
to top
>emb|AL591438.6| Human DNA sequence from clone RP11-452D2 on chromosome 9 Contains a
             pseudogene similar to part of ribosomal protein L7a
             (RPL7A), a novel pseudogene and a CpG island, complete
             sequence
          Length = 176097

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   tacagtctatttgaaatcct 162
             ||||||||||||||||||||
Sbjct: 46019 tacagtctatttgaaatcct 46000
to top
>emb|AL591479.3| Human DNA sequence from clone RP11-154P18 on chromosome 9 Contains two
             novel pseudogene, a CDRT15 protein pseudogene, a
             pseudogene similar to part of meprin A, alpha (PABA
             peptide hydrolase) (MEP1A) and two CpG islands, complete
             sequence
          Length = 178933

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   tacagtctatttgaaatcct 162
             ||||||||||||||||||||
Sbjct: 59679 tacagtctatttgaaatcct 59698
to top
>emb|AL354718.10| Human DNA sequence from clone RP11-187C18 on chromosome 9 Contains a
             pseudogene similar to part of ribosomal protein L7a
             (RPL7A), three novel genes, three novel pseudogene and two
             CpG islands, complete sequence
          Length = 175271

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   tacagtctatttgaaatcct 162
             ||||||||||||||||||||
Sbjct: 93887 tacagtctatttgaaatcct 93906
to top
>ref|XM_965065.1| PREDICTED: Tribolium castaneum similar to mesoderm induction early
           response 1 (LOC658701), mRNA
          Length = 1122

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 aatcttcctcttcttcctcg 277
           ||||||||||||||||||||
Sbjct: 439 aatcttcctcttcttcctcg 420
to top
>emb|AL592220.6| Human DNA sequence from clone RP11-12P21 on chromosome 9 Contains a tumor
              suppressor deleted in oral cancer-related 1 (DOC-1R)
              pseudogene, a novel pseudogene and a CpG island, complete
              sequence
          Length = 163556

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    tacagtctatttgaaatcct 162
              ||||||||||||||||||||
Sbjct: 104459 tacagtctatttgaaatcct 104440
to top
>gb|DQ184476.1| Orf virus strain NZ2, complete genome
          Length = 137820

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    tcctcttcttcctcggcggc 282
              ||||||||||||||||||||
Sbjct: 125515 tcctcttcttcctcggcggc 125496
to top
>emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chromosome 21, complete
             sequence
          Length = 278310

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   tacagtctatttgaaatcct 162
             ||||||||||||||||||||
Sbjct: 69473 tacagtctatttgaaatcct 69492
to top
>ref|XM_627058.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_1510),
            partial mRNA
          Length = 4815

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  actggaatcttcctcttctt 272
            ||||||||||||||||||||
Sbjct: 3284 actggaatcttcctcttctt 3265
to top
>gb|AC096711.2| Homo sapiens BAC clone RP11-1E22 from 4, complete sequence
          Length = 141037

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   tacagtctatttgaaatcct 162
             ||||||||||||||||||||
Sbjct: 12660 tacagtctatttgaaatcct 12679
to top
>gb|AF065879.1|AF065879 Nicotiana tabacum matrix attachment region pS116-1.1B
          Length = 998

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 cctaattaattaaaaagacc 205
           ||||||||||||||||||||
Sbjct: 900 cctaattaattaaaaagacc 881
to top
>gb|AC145250.3| Macropus eugenii clone ME_KBa-232I1, complete sequence
          Length = 126347

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 412   aaaccagttcatcacaactattgt 435
             ||||||||||||||||||| ||||
Sbjct: 52334 aaaccagttcatcacaactgttgt 52311
to top
>emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chromosome 22, complete
             sequence
          Length = 219376

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   tacagtctatttgaaatcct 162
             ||||||||||||||||||||
Sbjct: 12989 tacagtctatttgaaatcct 13008
to top
>emb|AL162252.17| Human DNA sequence from clone RP11-55J24 on chromosome 9, complete
             sequence
          Length = 176845

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   tacagtctatttgaaatcct 162
             ||||||||||||||||||||
Sbjct: 59434 tacagtctatttgaaatcct 59453
to top
>emb|AL805897.13| Mouse DNA sequence from clone RP23-63D8 on chromosome 4, complete
             sequence
          Length = 231989

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   tgaaatcctgctttggtttg 173
             ||||||||||||||||||||
Sbjct: 42923 tgaaatcctgctttggtttg 42942
to top
>emb|AL807823.6| Mouse DNA sequence from clone RP23-328E6 on chromosome 4, complete
             sequence
          Length = 216239

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 177   ctcctctcccctaattaattaaaa 200
             ||||| ||||||||||||||||||
Sbjct: 85426 ctcctgtcccctaattaattaaaa 85449
to top
>gb|AC168048.3| Mus musculus BAC clone RP24-335I13 from chromosome 16, complete sequence
          Length = 163057

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    ctatttgaaatcctgctttg 168
              ||||||||||||||||||||
Sbjct: 131364 ctatttgaaatcctgctttg 131345
to top
>emb|AL627068.9| Mouse DNA sequence from clone RP23-409D7 on chromosome 4, complete
             sequence
          Length = 32327

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   tgaaatcctgctttggtttg 173
             ||||||||||||||||||||
Sbjct: 23214 tgaaatcctgctttggtttg 23195


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,162,556
Number of Sequences: 3902068
Number of extensions: 5162556
Number of successful extensions: 144376
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144035
Number of HSP's gapped (non-prelim): 341
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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