ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart06f01 |
|---|---|
| Clone Library Name | barley_pub |
>UGPA_HORVU (Q43772) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 473 Score = 65.9 bits (159), Expect = 2e-11 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -3 Query: 345 VLKGNVTIAAKAGVKLEIPDGAVLENKDISGPXD 244 VLKGNVTIAAKAGVKLEIPDGAVLENKDI+GP D Sbjct: 439 VLKGNVTIAAKAGVKLEIPDGAVLENKDINGPED 472
>UGPA_SOLTU (P19595) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 476 Score = 57.4 bits (137), Expect = 9e-09 Identities = 26/33 (78%), Positives = 30/33 (90%) Frame = -3 Query: 342 LKGNVTIAAKAGVKLEIPDGAVLENKDISGPXD 244 LKG VT+AAK+GVKLEIPDGAV+ NKDI+GP D Sbjct: 443 LKGKVTVAAKSGVKLEIPDGAVIANKDINGPED 475
>UGPA_MUSAC (Q9SDX3) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 467 Score = 56.6 bits (135), Expect = 1e-08 Identities = 28/34 (82%), Positives = 31/34 (91%) Frame = -3 Query: 345 VLKGNVTIAAKAGVKLEIPDGAVLENKDISGPXD 244 VLKGNV+IAAK+GVKLEI DGAVLENK I+GP D Sbjct: 433 VLKGNVSIAAKSGVKLEISDGAVLENKVINGPED 466
>UGPA2_ARATH (Q9M9P3) Probable UTP--glucose-1-phosphate uridylyltransferase 2| (EC 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 469 Score = 55.8 bits (133), Expect = 3e-08 Identities = 26/34 (76%), Positives = 31/34 (91%) Frame = -3 Query: 345 VLKGNVTIAAKAGVKLEIPDGAVLENKDISGPXD 244 VLKG VT+AAK+GVKLEIPD AV+ENK+I+GP D Sbjct: 435 VLKGKVTVAAKSGVKLEIPDRAVVENKNINGPED 468
>UGPA1_ARATH (P57751) UTP--glucose-1-phosphate uridylyltransferase 1 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) Length = 470 Score = 55.5 bits (132), Expect = 3e-08 Identities = 26/34 (76%), Positives = 28/34 (82%) Frame = -3 Query: 345 VLKGNVTIAAKAGVKLEIPDGAVLENKDISGPXD 244 VLKG VT+ A AG KLEIPD AVLENKDI+GP D Sbjct: 436 VLKGKVTVKANAGTKLEIPDNAVLENKDINGPED 469
>UGPA_PYRPY (O64459) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 471 Score = 55.5 bits (132), Expect = 3e-08 Identities = 26/34 (76%), Positives = 29/34 (85%) Frame = -3 Query: 345 VLKGNVTIAAKAGVKLEIPDGAVLENKDISGPXD 244 VLKG VTI AK+GVKLEIPD AV+ NKDI+GP D Sbjct: 437 VLKGKVTITAKSGVKLEIPDNAVIANKDINGPED 470
>UGPA_ASTME (Q9LKG7) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 471 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = -3 Query: 345 VLKGNVTIAAKAGVKLEIPDGAVLENKDISGPXD 244 +LKG V+I AK+GVK+EIPDGAV+ NK+I+GP D Sbjct: 437 ILKGKVSIVAKSGVKVEIPDGAVIANKEINGPKD 470
>UGPA_DICDI (P08800) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 511 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = -3 Query: 342 LKGNVTIAAKAGVKLEIPDGAVLENKDISG 253 LKG V I A G +++IPDG VLENK +SG Sbjct: 475 LKGTVIIVANHGERVDIPDGVVLENKVLSG 504
>UGPA2_MOUSE (Q91ZJ5) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = -3 Query: 342 LKGNVTIAAKAGVKLEIPDGAVLENKDISG 253 LKG V I A G +++IP GAVLENK +SG Sbjct: 471 LKGTVIIIANHGDRIDIPPGAVLENKIVSG 500
>UGPA2_HUMAN (Q16851) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = -3 Query: 342 LKGNVTIAAKAGVKLEIPDGAVLENKDISG 253 LKG V I A G +++IP GAVLENK +SG Sbjct: 471 LKGTVIIIANHGDRIDIPPGAVLENKIVSG 500
>UGPA2_BOVIN (Q07130) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = -3 Query: 342 LKGNVTIAAKAGVKLEIPDGAVLENKDISG 253 LKG V I A G +++IP GAVLENK +SG Sbjct: 471 LKGTVIIIANHGDRIDIPPGAVLENKIVSG 500
>UGPA1_HUMAN (Q07131) UTP--glucose-1-phosphate uridylyltransferase 1 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) Length = 507 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = -3 Query: 342 LKGNVTIAAKAGVKLEIPDGAVLENKDISG 253 LKG V I A G +++IP GAVLENK +SG Sbjct: 471 LKGTVIIIANHGDRIDIPPGAVLENKIVSG 500
>UGPA1_CRIGR (O35156) UTP--glucose-1-phosphate uridylyltransferase 1 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 1) (UDPGP 1) (UGPase 1) Length = 507 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/30 (60%), Positives = 22/30 (73%) Frame = -3 Query: 342 LKGNVTIAAKAGVKLEIPDGAVLENKDISG 253 LKG V I A G +++IP GAVLENK +SG Sbjct: 471 LKGTVIIIANHGDRIDIPPGAVLENKIVSG 500
>UGPA2_PIG (P79303) UTP--glucose-1-phosphate uridylyltransferase 2 (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase 2) (UDPGP 2) (UGPase 2) Length = 507 Score = 36.2 bits (82), Expect = 0.021 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = -3 Query: 342 LKGNVTIAAKAGVKLEIPDGAVLENKDISG 253 LKG V I G +++IP GAVLENK +SG Sbjct: 471 LKGTVIIIXNHGDRIDIPPGAVLENKIVSG 500
>UGPA1_YEAST (P32861) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)| (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 499 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = -3 Query: 342 LKGNVTIAAKAGVKLEIPDGAVLENKDISG 253 L+G V I G K++IP+G++LEN ++G Sbjct: 463 LRGTVIIVCSDGHKIDIPNGSILENVVVTG 492
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 31.6 bits (70), Expect = 0.51 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = -2 Query: 340 QGQRDHCRQGXSQVGDPRRSGA*EQGHQRPXGYXSDVHPPARPPSR 203 QG +D G + G PRR+G+ E+G R G + PP R SR Sbjct: 903 QGSQDRGAAGSRERGPPRRAGSQERGPLRRAGSRERI-PPRRAGSR 947
>UGPA1_SCHPO (P78811) Probable UTP--glucose-1-phosphate uridylyltransferase (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 506 Score = 31.6 bits (70), Expect = 0.51 Identities = 15/30 (50%), Positives = 21/30 (70%) Frame = -3 Query: 342 LKGNVTIAAKAGVKLEIPDGAVLENKDISG 253 LKG V I A +++IP+G+VLEN I+G Sbjct: 470 LKGTVIIVASDANRIDIPNGSVLENCVITG 499
>RL2_THEMA (P38510) 50S ribosomal protein L2| Length = 276 Score = 31.2 bits (69), Expect = 0.66 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Frame = +2 Query: 68 CQWTARRGLQLLCNRAPAGQHPSRMHTKNYXTVNPA-KEDRK--VSGDARR--WAGRRVN 232 CQ A+ G L R P+G+ ++H K Y TV ED K V G A R W GRR + Sbjct: 163 CQIMAKEGNYALL-RMPSGEL-RKVHIKCYATVGVVGNEDHKNEVHGKAGRVRWLGRRPH 220 Query: 233 VTXISXGPL 259 V ++ P+ Sbjct: 221 VRGVAMNPV 229
>UGPA2_SCHPO (O59819) Probable UTP--glucose-1-phosphate uridylyltransferase (EC| 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (UGPase) Length = 499 Score = 31.2 bits (69), Expect = 0.66 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -3 Query: 345 VLKGNVTIAAKAGVKLEIPDGAVLENKDISG 253 +LKGN+ I A L IP AVLEN ++G Sbjct: 462 ILKGNIVIVASENTILCIPSNAVLENCVVTG 492
>KCNT1_HUMAN (Q5JUK3) Potassium channel subfamily T member 1 (KCa4.1)| Length = 1230 Score = 28.9 bits (63), Expect = 3.3 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = +1 Query: 190 GFWGCEKVGGQAGERHSXIXWAADVLVLKHRSVWDLQL 303 G WGC K + S I WA + V + ++W +Q+ Sbjct: 125 GCWGCPKQNYSFNDSSSEINWAPILWVERKMTLWAIQV 162
>REF2P_DROSI (Q24629) Protein ref(2)P (Refractory to sigma P)| Length = 599 Score = 28.9 bits (63), Expect = 3.3 Identities = 18/72 (25%), Positives = 30/72 (41%) Frame = +2 Query: 74 WTARRGLQLLCNRAPAGQHPSRMHTKNYXTVNPAKEDRKVSGDARRWAGRRVNVTXISXG 253 W GL C R G P + ++ PA++ R+ ARR AG + Sbjct: 180 WFTGPGLGRRCGRRSRGHCPFQEASQPAPAAEPARDSRRERRHARRHAGVLSQFVEMMTN 239 Query: 254 PLMSLFSSTAPS 289 ++ ++TAP+ Sbjct: 240 LPLNTTTATAPA 251
>Y564_TREPA (O83575) Hypothetical protein TP0564| Length = 678 Score = 27.7 bits (60), Expect = 7.3 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Frame = +2 Query: 53 QEERKCQWTARRGLQL-LCNRAPAGQH-PSRMHTK-NYXTVNPAKEDRKVSGDARRWAGR 223 QE C + RGL L L + P +H +R H + + + A++ ++S D+R + G Sbjct: 484 QEITACYRISERGLTLSLHSPLPIPRHIRARTHARLSTAEIQKAQDHLQISMDSRSYFGG 543 Query: 224 RVNVTXI 244 R+NV + Sbjct: 544 RINVLEV 550
>RCSC_SALTY (P58662) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = +2 Query: 68 CQWTARRGLQLLCNRAPAGQHPSRMHTKNYXTVNPAKEDRKVSGDA--RRWAGR 223 C W A R L C S +HT+ Y PA +D + DA W GR Sbjct: 708 CCWLAVRNTSL-CQFIETSLARSGVHTQRYEGQEPAADDILIVDDALEHTWQGR 760
>RCSC_SALTI (Q56128) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = +2 Query: 68 CQWTARRGLQLLCNRAPAGQHPSRMHTKNYXTVNPAKEDRKVSGDA--RRWAGR 223 C W A R L C S +HT+ Y PA +D + DA W GR Sbjct: 708 CCWLAVRNTSL-CQFIETSLARSGVHTQRYEGQEPAADDILIVDDALEHTWQGR 760
>GCS1_HUMAN (Q13724) Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106)| (Processing A-glucosidase I) Length = 837 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +3 Query: 75 GPHGGDYSYYVTGLPQDN 128 G HGGD+S+ VT PQD+ Sbjct: 178 GQHGGDWSWRVTVEPQDS 195
>HIS1_PYRKO (Q5JFR6) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 203 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -3 Query: 345 VLKGNVTIAAKAGVKLEIPDGAVLENKD 262 +LK ++ KAGV+LE+P+G L + D Sbjct: 10 LLKPSIEFLRKAGVELELPNGRELVSAD 37 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,987,446 Number of Sequences: 219361 Number of extensions: 1187925 Number of successful extensions: 3186 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 3008 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3184 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
