Clone Name | rbart06e12 |
---|---|
Clone Library Name | barley_pub |
>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:| Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin 2 low-kDa subunit] Length = 433 Score = 52.8 bits (125), Expect = 4e-07 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 3/103 (2%) Frame = -3 Query: 357 FGLCYDAKTLGNNLGGYSVPNVVLALDGGGEWAMTGKNSMVDVKPGTACVAFVEMEAGDG 178 FGLC+++ N + Y ++V+ G W ++G++ MV +PG C+ M G Sbjct: 331 FGLCFNS----NKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGV--MNGGMQ 384 Query: 177 GAPAVILGGAQMEDFVLDFDMEKKRLGFIRL---PHFTGCGNL 58 V LG Q+E+ ++ FD+ + R+GF H CG+L Sbjct: 385 PRAEVTLGTRQLEEKLMVFDLARSRVGFSTSSLHSHGVKCGDL 427
>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic| 7S globulin high-kDa subunit; Basic 7S globulin low-kDa subunit] Length = 427 Score = 52.0 bits (123), Expect = 7e-07 Identities = 33/116 (28%), Positives = 55/116 (47%) Frame = -3 Query: 441 VVDAFTKALAAQHANGXXXXXXXXXXXPFGLCYDAKTLGNNLGGYSVPNVVLALDGGGEW 262 V AFT+ A Q PFGLC+++ N + Y ++V+ G W Sbjct: 301 VYQAFTQVFAQQLPK----QAQVKSVAPFGLCFNS----NKINAYPSVDLVMDKPNGPVW 352 Query: 261 AMTGKNSMVDVKPGTACVAFVEMEAGDGGAPAVILGGAQMEDFVLDFDMEKKRLGF 94 ++G++ MV +PG C+ M G + LG Q+E+ ++ FD+ + R+GF Sbjct: 353 RISGEDLMVQAQPGVTCLGV--MNGGMQPRAEITLGARQLEENLVVFDLARSRVGF 406
>ASP3_CAEEL (P55956) Aspartic protease 3 precursor (EC 3.4.23.-)| Length = 398 Score = 32.0 bits (71), Expect = 0.76 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = -3 Query: 306 SVPNVVLALDGGGEWAMTGKNSMVDVKPG----TACVAFVEMEAGDGGAPAVILGGAQME 139 S+PN+ L GG + + GK+ ++ + G T F+ M+ P ILG + Sbjct: 318 SLPNITFNL-GGQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIG 376 Query: 138 DFVLDFDMEKKRLGF 94 F FD KR+GF Sbjct: 377 RFYSVFDHGNKRVGF 391
>CATD_BOVIN (P80209) Cathepsin D precursor (EC 3.4.23.5)| Length = 390 Score = 30.0 bits (66), Expect = 2.9 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%) Frame = -3 Query: 306 SVPNVVLALDGGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMED 136 S+P V + L GG ++A++ ++ + V T C++ F+ M+ G P ILG + Sbjct: 312 SLPEVTVKL-GGKDYALSPEDYALKVSQAETTVCLSGFMGMDIPPPGGPLWILGDVFIGR 370 Query: 135 FVLDFDMEKKRLG 97 + FD ++ R+G Sbjct: 371 YYTVFDRDQNRVG 383
>CATD_PIG (P00795) Cathepsin D precursor (EC 3.4.23.5) [Contains: Cathepsin D| light chain; Cathepsin D heavy chain] Length = 345 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = -3 Query: 306 SVPNVVLALDGGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMED 136 S+P+V + L GG ++ ++ +N + V T C++ F+ M+ G P ILG + Sbjct: 269 SLPDVTVTL-GGKKYKLSSENYTLKVSQAGQTICLSGFMGMDIPPPGGPLWILGDVFIGR 327 Query: 135 FVLDFDMEKKRLG 97 + FD + R+G Sbjct: 328 YYTVFDRDLNRVG 340
>ASPR_HORVU (P42210) Phytepsin precursor (EC 3.4.23.40) (Aspartic proteinase)| [Contains: Phytepsin 32 kDa subunit; Phytepsin 29 kDa subunit; Phytepsin 16 kDa subunit; Phytepsin 11 kDa subunit] Length = 508 Score = 29.6 bits (65), Expect = 3.8 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = -3 Query: 306 SVPNVVLALDGGGEWAMTGKNSMVDVKPGTA--CVA-FVEMEAGDGGAPAVILGGAQMED 136 S+P++ + GG ++A+ + ++ V G A C++ F M+ P ILG M Sbjct: 432 SMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGP 490 Query: 135 FVLDFDMEKKRLGFIR 88 + FD K R+GF + Sbjct: 491 YHTVFDYGKLRIGFAK 506
>ELF4_MOUSE (Q9Z2U4) ETS-related transcription factor Elf-4 (E74-like factor 4)| (Myeloid Elf-1-like factor) Length = 655 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +2 Query: 164 TAGAPPSPASISTNATHAVPGLTSTIEFFPVIAHXXXXXXASTTLGTEYPPRLLPSV 334 T + P+P++I PG T T++ P+ ASTT T+ + +P+V Sbjct: 393 TVSSSPAPSNIHLGVAPVGPGSTVTLQTIPLTTVLTNGPPASTTAPTQLVLQSVPAV 449
>RNH2_THIDA (Q3SKM7) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 204 Score = 29.6 bits (65), Expect = 3.8 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = -1 Query: 311 GTRCPTWCWRSTAGVNG 261 G RCP W WRS A V G Sbjct: 113 GDRCPEWTWRSQAVVQG 129
>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane| protein) Length = 2038 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +2 Query: 164 TAGAPPSPASISTNATHAVPGLTST 238 TAG PS IST H VPG T+T Sbjct: 249 TAGGAPSIPPISTMPPHTVPGSTNT 273
>OTX1_HUMAN (P32242) Homeobox protein OTX1| Length = 354 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/50 (30%), Positives = 22/50 (44%) Frame = +2 Query: 95 NPXXXXXXXXXXXXXXIWAPPRITAGAPPSPASISTNATHAVPGLTSTIE 244 NP IW+P I+ G+ +PAS+S A P TS ++ Sbjct: 160 NPVAAASSLSTPAASSIWSPASISPGS--APASVSVPEPLAAPSNTSCMQ 207
>CATD_CHICK (Q05744) Cathepsin D precursor (EC 3.4.23.5) [Contains: Cathepsin D| light chain; Cathepsin D heavy chain] Length = 398 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Frame = -3 Query: 306 SVPNVVLALDGGGEWAMTGKNSM--VDVKPGTACVA-FVEMEAGDGGAPAVILGGAQMED 136 S+P V L L GG + +TG+ + V + T C++ F ++ G P ILG + Sbjct: 322 SLPVVTLML-GGKPYQLTGEQYVFKVSAQGETICLSGFSGLDVPPPGGPLWILGDVFIGP 380 Query: 135 FVLDFDMEKKRLGFIR 88 + FD + +GF + Sbjct: 381 YYTVFDRDNDSVGFAK 396
>ASPR1_ORYSA (Q42456) Aspartic proteinase oryzasin-1 precursor (EC 3.4.23.-)| Length = 509 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Frame = -3 Query: 306 SVPNVVLALDGGGEWAMTGKNSMVDVKPGTA--CVA-FVEMEAGDGGAPAVILGGAQMED 136 S+P + + GG ++A+ + ++ V G A C++ F M+ P ILG M Sbjct: 433 SMPEISFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGA 491 Query: 135 FVLDFDMEKKRLGFIR 88 + FD K R+GF + Sbjct: 492 YHTVFDYGKMRVGFAK 507
>CATD_CLUHA (Q9DEX3) Cathepsin D precursor (EC 3.4.23.5)| Length = 396 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Frame = -3 Query: 276 GGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMEDFVLDFDMEKK 106 GG +++TG+ ++ G T C++ + +E P ILG + + FD E Sbjct: 329 GGKTYSLTGEQYVLKESQGGKTICLSGLMGLEIPPPAGPLWILGDVFIGQYYTVFDRESN 388 Query: 105 RLGFIR 88 R+GF + Sbjct: 389 RVGFAK 394
>CATD_MOUSE (P18242) Cathepsin D precursor (EC 3.4.23.5)| Length = 410 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Frame = -3 Query: 306 SVPNVVLALDGGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMED 136 S+P V L L GG + + ++ V G T C++ F+ M+ P ILG + Sbjct: 332 SLPTVYLKL-GGKNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGS 390 Query: 135 FVLDFDMEKKRLGF 94 + FD + R+GF Sbjct: 391 YYTVFDRDNNRVGF 404
>CATD_CANFA (Q4LAL9) Cathepsin D precursor (EC 3.4.23.5)| Length = 410 Score = 28.9 bits (63), Expect = 6.4 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%) Frame = -3 Query: 306 SVPNVVLALDGGGEWAMTGKNSMVDVKPG--TACVA-FVEMEAGDGGAPAVILGGAQMED 136 ++P+V L L GG + ++ ++ + V G T C++ F+ M+ G P ILG + Sbjct: 332 TLPDVTLKL-GGKLYKLSSEDYTLKVSQGGKTICLSGFMGMDIPPPGGPLWILGDVFIGC 390 Query: 135 FVLDFDMEKKRLG 97 + FD ++ R+G Sbjct: 391 YYTVFDRDQNRVG 403
>Y1408_METKA (Q8TVI1) UPF0245 protein MK1408| Length = 402 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -3 Query: 243 SMVDVKPGTACVAFVEMEAGDG 178 S+VD+KPG +A+VE E G G Sbjct: 367 SVVDLKPGDKVLAYVETEEGKG 388 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,907,931 Number of Sequences: 219361 Number of extensions: 871568 Number of successful extensions: 3430 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3429 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)