>KI67_HUMAN (P46013) Antigen KI-67|
          Length = 3256

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
 Frame = +1

Query: 7   KQHMLLSRSEYFVYILYMLFFLQSFG*GEAQ---RNNYCDSEDCGPRRRITYRVSPGPPP 177
           ++ + +SRS++   IL M+   +  G  EA      ++ D    G ++  T  +  GP  
Sbjct: 626 QKRVSISRSQHD--ILQMICSKRRSGASEANLIVAKSWADVVKLGAKQTQTKVIKHGPQR 683

Query: 178 NEPVITTAYHLCSSPTDTMHRXHGSFSTEHILSPCNRGSSRAHYNSAKLLGIPL*TYSDV 357
           +   +       ++P   +   H  FST H  SPC     +AH     +   P    ++ 
Sbjct: 684 S---MNKRQRRPATPKKPVGEVHSQFSTGHANSPCTIIIGKAHTEKVHVPARPYRVLNNF 740

Query: 358 LSN 366
           +SN
Sbjct: 741 ISN 743

>CT128_HUMAN (Q9BQN1) Protein C20orf128|
          Length = 733

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 123 GLWTKASHHLQSQPWSTSX*ASNHNCVSPLFIS 221
           GL+      L + PWS S  A NHN  SPL ++
Sbjct: 394 GLYRANLGKLGAYPWSQSSPALNHNSTSPLTLA 426

>PRRB_MYCTU (P0A5Z8) Sensor-type histidine kinase prrB (EC 2.7.13.3)|
          Length = 446

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +1

Query: 100 RNNYCDSEDCGPRRRITYRVSPGPPPNEPVITTAYHLCSSPTDTMHR 240
           +++Y D+   G R R+     PGP P    +   Y    + T+ +HR
Sbjct: 102 QDDYADTYVRGVRYRVRTVEIPGPEPTSVAVGATYDATVAETNNLHR 148

>PRRB_MYCBO (P0A5Z9) Sensor-type histidine kinase prrB (EC 2.7.13.3)|
          Length = 446

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +1

Query: 100 RNNYCDSEDCGPRRRITYRVSPGPPPNEPVITTAYHLCSSPTDTMHR 240
           +++Y D+   G R R+     PGP P    +   Y    + T+ +HR
Sbjct: 102 QDDYADTYVRGVRYRVRTVEIPGPEPTSVAVGATYDATVAETNNLHR 148

>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 115  DSEDCGPRR-RITYRVSPGPPPNEPVITTAYHLCSSPTDTMHRXHG 249
            D ED GPRR R +  + P P P   +++++    SS  D + R  G
Sbjct: 931  DEEDRGPRRKRRSLGLGPAPDPAPALVSSSSSSSSSEDDRLRRPLG 976


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,159,118
Number of Sequences: 219361
Number of extensions: 1211427
Number of successful extensions: 2911
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2908
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)