ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart06e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017890.1| Zea mays clone EL01N0514H11.c mRNA sequence 200 3e-48
2gb|AY104477.1| Zea mays PCO085861 mRNA sequence 200 3e-48
3dbj|AK105995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
4dbj|AK103269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
5dbj|AK060152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
6gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome... 135 1e-28
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
8dbj|AK073643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 3e-23
9dbj|AK059798.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 3e-23
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
11dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
12dbj|AP006103.1| Lotus japonicus genomic DNA, chromosome 1, clone... 66 1e-07
13ref|NM_120282.2| Arabidopsis thaliana unknown protein AT5G02040 ... 58 3e-05
14ref|NM_180422.1| Arabidopsis thaliana unknown protein AT5G02040 ... 58 3e-05
15gb|AY079325.1| Arabidopsis thaliana unknown protein (At5g02040) ... 58 3e-05
16gb|AY045975.1| Arabidopsis thaliana unknown protein (At5g02040) ... 58 3e-05
17emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BA... 58 3e-05
18gb|AY054290.1| Arabidopsis thaliana AT5g02040/T7H20_90 mRNA, com... 58 3e-05
19emb|BX832801.1|CNS09YS6 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
20gb|AY085842.1| Arabidopsis thaliana clone 18955 mRNA, complete s... 58 3e-05
21gb|BT018298.1| Zea mays clone EL01T0206B04.c mRNA sequence 46 0.10
22gb|AC175380.2| Mus musculus BAC clone RP24-333L5 from chromosome... 42 1.6
23emb|AL589994.5| Human DNA sequence from clone RP4-724P12 on chro... 42 1.6
24gb|AC134820.1| Homo sapiens chromosome 5 clone CTD-2270F17, comp... 40 6.3
25gb|AC127338.4| Mus musculus BAC clone RP23-174F20 from 7, comple... 40 6.3
26emb|CR293501.10| Zebrafish DNA sequence from clone DKEYP-86F7 in... 40 6.3
27emb|AL021407.1|HS13D10 Human DNA sequence from clone RP1-13D10 o... 40 6.3
28gb|AC092284.2| Homo sapiens chromosome 5 clone CTD-2160D9, compl... 40 6.3
29gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, compl... 40 6.3
30gb|AC034199.6| Homo sapiens chromosome 5 clone CTB-114C7, comple... 40 6.3
31gb|AC158538.2| Mus musculus BAC clone RP23-2H11 from chromosome ... 40 6.3
32gb|AC113407.2| Homo sapiens chromosome 5 clone RP11-475J5, compl... 40 6.3
33emb|AL844570.9| Zebrafish DNA sequence from clone DKEY-20D18, co... 40 6.3
34gb|AC002294.1|AC002294 Arabidopsis thaliana chromosome I BAC F11... 40 6.3 
>gb|BT017890.1| Zea mays clone EL01N0514H11.c mRNA sequence
          Length = 1295

 Score =  200 bits (101), Expect = 3e-48
 Identities = 146/161 (90%)
 Strand = Plus / Minus

                                                                       
Query: 300 agctcactataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgct 359
           ||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 845 agctcactataattccgccaaacagcccggaattcctctctgaatgtattcagacgtgct 786

                                                                       
Query: 360 ttcaaattaggtgttctgaagctggcatgaagtaccgttgtaagtagagcaatgagaagt 419
           || | ||| |||||||||||||| ||||| || || |||| || ||||||||||||||||
Sbjct: 785 ttgagatttggtgttctgaagcttgcatggagcacagttgcaaatagagcaatgagaagt 726

                                                    
Query: 420 gcccatagaactgtgaggagactgcatgaggtcaaccagag 460
           ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 725 gcccagaggactgtgagaagactgcatgaggtcaaccagag 685



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   tttacatcctttacatgctg 63
            ||||||||||||||||||||
Sbjct: 1112 tttacatcctttacatgctg 1093
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>gb|AY104477.1| Zea mays PCO085861 mRNA sequence
          Length = 1262

 Score =  200 bits (101), Expect = 3e-48
 Identities = 146/161 (90%)
 Strand = Plus / Minus

                                                                       
Query: 300 agctcactataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgct 359
           ||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 829 agctcactataattccgccaaacagcccggaattcctctctgaatgtattcagacgtgct 770

                                                                       
Query: 360 ttcaaattaggtgttctgaagctggcatgaagtaccgttgtaagtagagcaatgagaagt 419
           || | ||| |||||||||||||| ||||| || || |||| || ||||||||||||||||
Sbjct: 769 ttgagatttggtgttctgaagcttgcatggagcacagttgcaaatagagcaatgagaagt 710

                                                    
Query: 420 gcccatagaactgtgaggagactgcatgaggtcaaccagag 460
           ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 709 gcccagaggactgtgagaagactgcatgaggtcaaccagag 669



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 44   tttacatcctttacatgctgt 64
            |||||||||||||||||||||
Sbjct: 1096 tttacatcctttacatgctgt 1076
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>dbj|AK105995.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H05, full
           insert sequence
          Length = 1094

 Score =  184 bits (93), Expect = 2e-43
 Identities = 147/165 (89%)
 Strand = Plus / Minus

                                                                       
Query: 300 agctcactataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgct 359
           |||||||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 791 agctcactataattcctccaaacagctcggaattcttctctgaatgtattcagacgtgct 732

                                                                       
Query: 360 ttcaaattaggtgttctgaagctggcatgaagtaccgttgtaagtagagcaatgagaagt 419
           |||| |||||||||||||||||| |||||||| |  |||| ||  | |||||| | ||| 
Sbjct: 731 ttcagattaggtgttctgaagctagcatgaagcagagttgcaaagatagcaattaaaagg 672

                                                        
Query: 420 gcccatagaactgtgaggagactgcatgaggtcaaccagagcatg 464
           |||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 671 gcccatagaactgtgaggagactgcaggaagtcaaccagagcatg 627



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 79/91 (86%), Gaps = 5/91 (5%)
 Strand = Plus / Minus

                                                                        
Query: 3    caacaaacaacatatgcttttgtctagatcagaatactttgtttacatcctttacatgct 62
            |||||||||| ||||||   ||| | ||| ||||||| ||||||||||||||||||||||
Sbjct: 1094 caacaaacaatatatgc---tgtgttgattagaatac-ttgtttacatcctttacatgct 1039

                                           
Query: 63   gttcttcctccaaagctttggttagggagaa 93
            ||||||  ||||| || ||||||||||||||
Sbjct: 1038 gttctttttccaatgc-ttggttagggagaa 1009
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>dbj|AK103269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124H03, full
           insert sequence
          Length = 1107

 Score =  184 bits (93), Expect = 2e-43
 Identities = 147/165 (89%)
 Strand = Plus / Minus

                                                                       
Query: 300 agctcactataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgct 359
           |||||||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 783 agctcactataattcctccaaacagctcggaattcttctctgaatgtattcagacgtgct 724

                                                                       
Query: 360 ttcaaattaggtgttctgaagctggcatgaagtaccgttgtaagtagagcaatgagaagt 419
           |||| |||||||||||||||||| |||||||| |  |||| ||  | |||||| | ||| 
Sbjct: 723 ttcagattaggtgttctgaagctagcatgaagcagagttgcaaagatagcaattaaaagg 664

                                                        
Query: 420 gcccatagaactgtgaggagactgcatgaggtcaaccagagcatg 464
           |||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 663 gcccatagaactgtgaggagactgcaggaagtcaaccagagcatg 619



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 84/97 (86%), Gaps = 5/97 (5%)
 Strand = Plus / Minus

                                                                        
Query: 2    tcaacaaacaacatatgcttttgtctagatcagaatactttgtttacatcctttacatgc 61
            ||||||||||| |||||||   || | ||| ||||||||| |||||||||||||||||||
Sbjct: 1087 tcaacaaacaatatatgct---gtgttgattagaatactt-gtttacatcctttacatgc 1032

                                                 
Query: 62   tgttcttcctccaaagctttggttagggagaagccca 98
            |||||||  ||||| || |||||||||||||| ||||
Sbjct: 1031 tgttctttttccaatgc-ttggttagggagaatccca 996
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>dbj|AK060152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E07, full
           insert sequence
          Length = 1199

 Score =  184 bits (93), Expect = 2e-43
 Identities = 147/165 (89%)
 Strand = Plus / Minus

                                                                       
Query: 300 agctcactataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgct 359
           |||||||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 872 agctcactataattcctccaaacagctcggaattcttctctgaatgtattcagacgtgct 813

                                                                       
Query: 360 ttcaaattaggtgttctgaagctggcatgaagtaccgttgtaagtagagcaatgagaagt 419
           |||| |||||||||||||||||| |||||||| |  |||| ||  | |||||| | ||| 
Sbjct: 812 ttcagattaggtgttctgaagctagcatgaagcagagttgcaaagatagcaattaaaagg 753

                                                        
Query: 420 gcccatagaactgtgaggagactgcatgaggtcaaccagagcatg 464
           |||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 752 gcccatagaactgtgaggagactgcaggaagtcaaccagagcatg 708



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 80/92 (86%), Gaps = 5/92 (5%)
 Strand = Plus / Minus

                                                                        
Query: 2    tcaacaaacaacatatgcttttgtctagatcagaatactttgtttacatcctttacatgc 61
            ||||||||||| |||||||   || | ||| ||||||||| |||||||||||||||||||
Sbjct: 1176 tcaacaaacaatatatgct---gtgttgattagaatactt-gtttacatcctttacatgc 1121

                                            
Query: 62   tgttcttcctccaaagctttggttagggagaa 93
            |||||||  ||||| || ||||||||||||||
Sbjct: 1120 tgttctttttccaatgc-ttggttagggagaa 1090
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>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06,
             complete sequence
          Length = 145323

 Score =  135 bits (68), Expect = 1e-28
 Identities = 86/92 (93%)
 Strand = Plus / Minus

                                                                         
Query: 300   agctcactataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgct 359
             |||||||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 85458 agctcactataattcctccaaacagctcggaattcttctctgaatgtattcagacgtgct 85399

                                             
Query: 360   ttcaaattaggtgttctgaagctggcatgaag 391
             |||| |||||||||||||||||| ||||||||
Sbjct: 85398 ttcagattaggtgttctgaagctagcatgaag 85367



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                       
Query: 407   agcaatgagaagtgcccatagaactgtgaggagactgcatgaggtcaaccagagcatg 464
             |||||| | ||| |||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 85262 agcaattaaaagggcccatagaactgtgaggagactgcaggaagtcaaccagagcatg 85205



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 80/92 (86%), Gaps = 5/92 (5%)
 Strand = Plus / Minus

                                                                         
Query: 2     tcaacaaacaacatatgcttttgtctagatcagaatactttgtttacatcctttacatgc 61
             ||||||||||| |||||||   || | ||| ||||||||| |||||||||||||||||||
Sbjct: 85902 tcaacaaacaatatatgct---gtgttgattagaatactt-gtttacatcctttacatgc 85847

                                             
Query: 62    tgttcttcctccaaagctttggttagggagaa 93
             |||||||  ||||| || ||||||||||||||
Sbjct: 85846 tgttctttttccaatgc-ttggttagggagaa 85816
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  135 bits (68), Expect = 1e-28
 Identities = 86/92 (93%)
 Strand = Plus / Minus

                                                                            
Query: 300      agctcactataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgct 359
                |||||||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 22242193 agctcactataattcctccaaacagctcggaattcttctctgaatgtattcagacgtgct 22242134

                                                
Query: 360      ttcaaattaggtgttctgaagctggcatgaag 391
                |||| |||||||||||||||||| ||||||||
Sbjct: 22242133 ttcagattaggtgttctgaagctagcatgaag 22242102



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                          
Query: 407      agcaatgagaagtgcccatagaactgtgaggagactgcatgaggtcaaccagagcatg 464
                |||||| | ||| |||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 22241997 agcaattaaaagggcccatagaactgtgaggagactgcaggaagtcaaccagagcatg 22241940



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 80/92 (86%), Gaps = 5/92 (5%)
 Strand = Plus / Minus

                                                                            
Query: 2        tcaacaaacaacatatgcttttgtctagatcagaatactttgtttacatcctttacatgc 61
                ||||||||||| |||||||   || | ||| ||||||||| |||||||||||||||||||
Sbjct: 22242637 tcaacaaacaatatatgct---gtgttgattagaatactt-gtttacatcctttacatgc 22242582

                                                
Query: 62       tgttcttcctccaaagctttggttagggagaa 93
                |||||||  ||||| || ||||||||||||||
Sbjct: 22242581 tgttctttttccaatgc-ttggttagggagaa 22242551
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>dbj|AK073643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033053O06, full
           insert sequence
          Length = 1191

 Score =  117 bits (59), Expect = 3e-23
 Identities = 131/155 (84%)
 Strand = Plus / Minus

                                                                       
Query: 306 ctataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaa 365
           |||||||||||||| |||||||| |||||||| ||||| || ||||| |||||||||| |
Sbjct: 720 ctataattccgccatactgctcgaaattcctccctgaatgtgttcaggcgtgctttcaga 661

                                                                       
Query: 366 ttaggtgttctgaagctggcatgaagtaccgttgtaagtagagcaatgagaagtgcccat 425
           |||||||||||||| ||||| ||||| |  |||| ||| ||| |||  |  |||||||| 
Sbjct: 660 ttaggtgttctgaaactggcgtgaagcaaggttgcaagcagaccaacaattagtgcccac 601

                                              
Query: 426 agaactgtgaggagactgcatgaggtcaaccagag 460
           ||||| || |||||||| |||||||||| ||||||
Sbjct: 600 agaaccgtaaggagactacatgaggtcatccagag 566
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>dbj|AK059798.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F01, full
           insert sequence
          Length = 1196

 Score =  117 bits (59), Expect = 3e-23
 Identities = 131/155 (84%)
 Strand = Plus / Minus

                                                                       
Query: 306 ctataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaa 365
           |||||||||||||| |||||||| |||||||| ||||| || ||||| |||||||||| |
Sbjct: 801 ctataattccgccatactgctcgaaattcctccctgaatgtgttcaggcgtgctttcaga 742

                                                                       
Query: 366 ttaggtgttctgaagctggcatgaagtaccgttgtaagtagagcaatgagaagtgcccat 425
           |||||||||||||| ||||| ||||| |  |||| ||| ||| |||  |  |||||||| 
Sbjct: 741 ttaggtgttctgaaactggcgtgaagcaaggttgcaagcagaccaacaattagtgcccac 682

                                              
Query: 426 agaactgtgaggagactgcatgaggtcaaccagag 460
           ||||| || |||||||| |||||||||| ||||||
Sbjct: 681 agaaccgtaaggagactacatgaggtcatccagag 647
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                            
Query: 306      ctataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaa 365
                |||||||||||||| |||||||| |||||||| ||||| || ||||| |||||||||| |
Sbjct: 36413757 ctataattccgccatactgctcgaaattcctccctgaatgtgttcaggcgtgctttcaga 36413816

                                          
Query: 366      ttaggtgttctgaagctggcatgaag 391
                |||||||||||||| ||||| |||||
Sbjct: 36413817 ttaggtgttctgaaactggcgtgaag 36413842
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>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0005H10
          Length = 142885

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                         
Query: 306   ctataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaa 365
             |||||||||||||| |||||||| |||||||| ||||| || ||||| |||||||||| |
Sbjct: 65596 ctataattccgccatactgctcgaaattcctccctgaatgtgttcaggcgtgctttcaga 65655

                                       
Query: 366   ttaggtgttctgaagctggcatgaag 391
             |||||||||||||| ||||| |||||
Sbjct: 65656 ttaggtgttctgaaactggcgtgaag 65681
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>dbj|AP006103.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11J24, TM0185,
             complete sequence
          Length = 121047

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                         
Query: 300   agctcactataattccgccaaactgctcggaattcctctctgaacgtattcagacgtgct 359
             |||||||||||||| ||||| ||||| |||||||| || | ||| || || | |||||||
Sbjct: 75204 agctcactataattgcgccatactgcacggaattcttcacggaatgtgtttaaacgtgct 75263

                                          
Query: 360   ttcaaattaggtgttctgaagctggcatg 388
             ||||  ||||||||||| ||||| |||||
Sbjct: 75264 ttcaggttaggtgttctaaagcttgcatg 75292
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>ref|NM_120282.2| Arabidopsis thaliana unknown protein AT5G02040 transcript variant
           AT5G02040.1 mRNA, complete cds
          Length = 1217

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 315 cgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaattaggtgtt 374
           ||||| ||||||||||||||||| || || || || | |||||| ||||| || ||||||
Sbjct: 875 cgccatactgctcggaattcctccctaaatgtgttaaaacgtgccttcaagttcggtgtt 816

                            
Query: 375 ctgaagctggcatgaag 391
           || ||||| ||||||||
Sbjct: 815 ctcaagcttgcatgaag 799
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>ref|NM_180422.1| Arabidopsis thaliana unknown protein AT5G02040 transcript variant
           AT5G02040.2 mRNA, complete cds
          Length = 1211

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 315 cgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaattaggtgtt 374
           ||||| ||||||||||||||||| || || || || | |||||| ||||| || ||||||
Sbjct: 875 cgccatactgctcggaattcctccctaaatgtgttaaaacgtgccttcaagttcggtgtt 816

                            
Query: 375 ctgaagctggcatgaag 391
           || ||||| ||||||||
Sbjct: 815 ctcaagcttgcatgaag 799
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>gb|AY079325.1| Arabidopsis thaliana unknown protein (At5g02040) mRNA, complete cds
          Length = 661

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 315 cgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaattaggtgtt 374
           ||||| ||||||||||||||||| || || || || | |||||| ||||| || ||||||
Sbjct: 611 cgccatactgctcggaattcctccctaaatgtgttaaaacgtgccttcaagttcggtgtt 552

                            
Query: 375 ctgaagctggcatgaag 391
           || ||||| ||||||||
Sbjct: 551 ctcaagcttgcatgaag 535
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>gb|AY045975.1| Arabidopsis thaliana unknown protein (At5g02040) mRNA, complete cds
          Length = 1237

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 315 cgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaattaggtgtt 374
           ||||| ||||||||||||||||| || || || || | |||||| ||||| || ||||||
Sbjct: 875 cgccatactgctcggaattcctccctaaatgtgttaaaacgtgccttcaagttcggtgtt 816

                            
Query: 375 ctgaagctggcatgaag 391
           || ||||| ||||||||
Sbjct: 815 ctcaagcttgcatgaag 799
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>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project)
          Length = 87581

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 315   cgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaattaggtgtt 374
             ||||| ||||||||||||||||| || || || || | |||||| ||||| || ||||||
Sbjct: 33465 cgccatactgctcggaattcctccctaaatgtgttaaaacgtgccttcaagttcggtgtt 33406

                              
Query: 375   ctgaagctggcatgaag 391
             || ||||| ||||||||
Sbjct: 33405 ctcaagcttgcatgaag 33389
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>gb|AY054290.1| Arabidopsis thaliana AT5g02040/T7H20_90 mRNA, complete cds
          Length = 1107

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 315 cgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaattaggtgtt 374
           ||||| ||||||||||||||||| || || || || | |||||| ||||| || ||||||
Sbjct: 770 cgccatactgctcggaattcctccctaaatgtgttaaaacgtgccttcaagttcggtgtt 711

                            
Query: 375 ctgaagctggcatgaag 391
           || ||||| ||||||||
Sbjct: 710 ctcaagcttgcatgaag 694
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>emb|BX832801.1|CNS09YS6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL13ZE05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1046

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 315 cgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaattaggtgtt 374
           ||||| ||||||||||||||||| || || || || | |||||| ||||| || ||||||
Sbjct: 770 cgccatactgctcggaattcctccctaaatgtgttaaaacgtgccttcaagttcggtgtt 711

                            
Query: 375 ctgaagctggcatgaag 391
           || ||||| ||||||||
Sbjct: 710 ctcaagcttgcatgaag 694
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>gb|AY085842.1| Arabidopsis thaliana clone 18955 mRNA, complete sequence
          Length = 1124

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 315 cgccaaactgctcggaattcctctctgaacgtattcagacgtgctttcaaattaggtgtt 374
           ||||| ||||||||||||||||| || || || || | |||||| ||||| || ||||||
Sbjct: 782 cgccatactgctcggaattcctccctaaatgtgttaaaacgtgccttcaagttcggtgtt 723

                            
Query: 375 ctgaagctggcatgaag 391
           || ||||| ||||||||
Sbjct: 722 ctcaagcttgcatgaag 706
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>gb|BT018298.1| Zea mays clone EL01T0206B04.c mRNA sequence
          Length = 690

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 438 agactgcatgaggtcaaccagag 460
           |||||||||||||||||||||||
Sbjct: 303 agactgcatgaggtcaaccagag 281



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 44  tttacatcctttacatgctgt 64
           |||||||||||||||||||||
Sbjct: 622 tttacatcctttacatgctgt 602
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>gb|AC175380.2| Mus musculus BAC clone RP24-333L5 from chromosome 13, complete sequence
          Length = 164055

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 253    ttcagcactgagcacatctta 273
              |||||||||||||||||||||
Sbjct: 135788 ttcagcactgagcacatctta 135768
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>emb|AL589994.5| Human DNA sequence from clone RP4-724P12 on chromosome 6 Contains a
             pseudogene similar to part of myotubularin related protein
             9 MTMR9, complete sequence
          Length = 69318

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 360   ttcaaattaggtgttctgaag 380
             |||||||||||||||||||||
Sbjct: 20599 ttcaaattaggtgttctgaag 20619
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>gb|AC134820.1| Homo sapiens chromosome 5 clone CTD-2270F17, complete sequence
          Length = 54692

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     caaacaacatatgcttttgt 25
             ||||||||||||||||||||
Sbjct: 49329 caaacaacatatgcttttgt 49310
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>gb|AC127338.4| Mus musculus BAC clone RP23-174F20 from 7, complete sequence
          Length = 199546

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 410    aatgagaagtgcccatagaa 429
              ||||||||||||||||||||
Sbjct: 139014 aatgagaagtgcccatagaa 139033
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>emb|CR293501.10| Zebrafish DNA sequence from clone DKEYP-86F7 in linkage group 23,
              complete sequence
          Length = 203705

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     ttgtttacatcctttacatg 60
              ||||||||||||||||||||
Sbjct: 158175 ttgtttacatcctttacatg 158194
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>emb|AL021407.1|HS13D10 Human DNA sequence from clone RP1-13D10 on chromosome 6p22.3-23
             Contains the MIR gene for myosin regulatory light chain
             interacting protein, a mitochondrial 28S ribosomal protein
             S32 (MRP-S32) pseudogene, a pseudogene similar to part of
             eukaryotic translation initiation factor 2 subunit 2
             (EIF2S2), a P53-induced protein PIGPC1 pseudogene, a
             malate dehydrogenase pseudogene and a CpG island, complete
             sequence
          Length = 153147

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    agaagcccaaaggaacaact 109
             ||||||||||||||||||||
Sbjct: 22908 agaagcccaaaggaacaact 22889
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>gb|AC092284.2| Homo sapiens chromosome 5 clone CTD-2160D9, complete sequence
          Length = 107044

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   tgtaagtagagcaatgagaa 417
             ||||||||||||||||||||
Sbjct: 40413 tgtaagtagagcaatgagaa 40432
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>gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, complete sequence
          Length = 176095

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tacatgctgttcttcctcca 74
             ||||||||||||||||||||
Sbjct: 25452 tacatgctgttcttcctcca 25433
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>gb|AC034199.6| Homo sapiens chromosome 5 clone CTB-114C7, complete sequence
          Length = 122880

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      caaacaacatatgcttttgt 25
              ||||||||||||||||||||
Sbjct: 120068 caaacaacatatgcttttgt 120087
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>gb|AC158538.2| Mus musculus BAC clone RP23-2H11 from chromosome 13, complete sequence
          Length = 237313

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   tcacctacagagtcagccct 165
             ||||||||||||||||||||
Sbjct: 51146 tcacctacagagtcagccct 51165
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>gb|AC113407.2| Homo sapiens chromosome 5 clone RP11-475J5, complete sequence
          Length = 186648

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   tgtaagtagagcaatgagaa 417
             ||||||||||||||||||||
Sbjct: 32996 tgtaagtagagcaatgagaa 33015
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>emb|AL844570.9| Zebrafish DNA sequence from clone DKEY-20D18, complete sequence
          Length = 240816

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ttgtttacatcctttacatg 60
             ||||||||||||||||||||
Sbjct: 11958 ttgtttacatcctttacatg 11977
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>gb|AC002294.1|AC002294 Arabidopsis thaliana chromosome I BAC F11P17 genomic sequence, complete
             sequence
          Length = 103338

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    tatgcttttgtctagatcag 34
             ||||||||||||||||||||
Sbjct: 19301 tatgcttttgtctagatcag 19282


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,719,572
Number of Sequences: 3902068
Number of extensions: 3719572
Number of successful extensions: 65166
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 65069
Number of HSP's gapped (non-prelim): 89
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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