>PSD4_ARATH (P55034) 26S proteasome non-ATPase regulatory subunit 4 (26S|
           proteasome regulatory subunit S5A) (Multiubiquitin
           chain-binding protein)
          Length = 386

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 30/72 (41%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
 Frame = -1

Query: 422 QMSVQDAEASGQSDM-SKVFEDRSFVTSILNSLPGVDPNDPSVKDLLASLHGQGEQEKKD 246
           QMS+   E+S  +   + +  +++F++S+L+SLPGVDPNDP+VK+LLASL  + ++ +++
Sbjct: 315 QMSMSGEESSEATGAGNNLLGNQAFISSVLSSLPGVDPNDPAVKELLASLPDESKRTEEE 374

Query: 245 EADKTDKPEDGK 210
           E+  + K ED K
Sbjct: 375 ES-SSKKGEDEK 385

>PSD4_HUMAN (P55036) 26S proteasome non-ATPase regulatory subunit 4 (26S|
           proteasome regulatory subunit S5A) (Rpn10)
           (Multiubiquitin chain-binding protein) (Antisecretory
           factor 1) (AF) (ASF)
          Length = 377

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 20/64 (31%), Positives = 39/64 (60%)
 Frame = -1

Query: 416 SVQDAEASGQSDMSKVFEDRSFVTSILNSLPGVDPNDPSVKDLLASLHGQGEQEKKDEAD 237
           ++  +E + + D   V +D  F+ S+L +LPGVDPN+ ++++ + SL  Q  ++ K +  
Sbjct: 313 AMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKK 372

Query: 236 KTDK 225
           + DK
Sbjct: 373 EEDK 376

>PSD4_MOUSE (O35226) 26S proteasome non-ATPase regulatory subunit 4 (26S|
           proteasome regulatory subunit S5A) (Rpn10)
           (Multiubiquitin chain-binding protein)
          Length = 376

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
 Frame = -1

Query: 389 QSDMSKVFEDRSFVTSILNSLPGVDPNDPSVKDLLASLHGQ----GEQEKKDEADK 234
           + D   V +D  F+ S+L +LPGVDPN+ +++ ++ +L  Q    G+ +KK+E  K
Sbjct: 321 EEDDYDVMQDPEFLQSVLENLPGVDPNNAAIRSVMGALASQATKDGKNDKKEEEKK 376

>PSD4_DROME (P55035) 26S proteasome non-ATPase regulatory subunit 4 (26S|
           proteasome regulatory subunit S5A) (Multiubiquitin
           chain-binding protein) (54 kDa subunit of mu particle)
           (p54)
          Length = 396

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 21/53 (39%), Positives = 33/53 (62%)
 Frame = -1

Query: 383 DMSKVFEDRSFVTSILNSLPGVDPNDPSVKDLLASLHGQGEQEKKDEADKTDK 225
           D S+V  D +F+ S+L +LPGVDP   +V+D + SL+ + + +K D  D   K
Sbjct: 345 DYSEVIGDPAFLQSVLENLPGVDPQSEAVRDAVGSLN-KDKDKKSDGKDSQKK 396

>PSD4_SCHMA (O17453) 26S proteasome non-ATPase regulatory subunit 4 (26S|
           proteasome regulatory subunit S5A)
          Length = 420

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -1

Query: 371 VFEDRSFVTSILNSLPGVDPNDPSVKDLLASLHGQGEQ--EKKDEADKTDK 225
           V  D  F+ S+L SLPGVD  +  V+  + +L     Q   KKDE +  DK
Sbjct: 367 VMYDAEFLESVLQSLPGVDTQNEDVRKAINALTKSQSQRGSKKDEKEDEDK 417

>PA2_BITCA (P00622) Phospholipase A2 (EC 3.1.1.4) (Caudoxin)|
           (Phosphatidylcholine 2-acylhydrolase)
          Length = 121

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = -1

Query: 227 KPEDGKN*SPFVASCT*GREEDCLP*LLLHLGYEFT*SSGNCVDDNSNAKRIC 69
           +P+D  +   FV  C  G+ + C P ++L+  Y+F   +  C D N+  K++C
Sbjct: 34  QPKDDTDRCCFVHDCCYGKADKCSPKMILY-SYKFHNGNIVCGDKNACKKKVC 85

>PA21_ECHCO (Q90ZZ9) Phospholipase A2 EC1 precursor (EC 3.1.1.4)|
           (Phosphatidylcholine 2-acylhydrolase)
          Length = 138

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -1

Query: 227 KPEDGKN*SPFVASCT*GREEDCLP*LLLHLGYEFT*SSGNCVDDNSNAKRIC 69
           KP+D  +   FV  C   R  DC P  +    Y F      C DD+S  K +C
Sbjct: 51  KPQDASDRCCFVHDCCYTRVNDCSP-KMTSYSYSFENRDIICGDDDSCRKAVC 102

>Y3584_VIBCH (Q9KLG0) Putative reductase VCA0784 (EC 1.3.1.-)|
          Length = 402

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +2

Query: 164 LLPFLMCMKQQRDFSSSHLQACLSCPPHLSSPALLGHAKMPVD---LSQMGHW 313
           L P+L+ + Q      +H + C+     L S  L GH+++P+D   L +M  W
Sbjct: 290 LSPYLLALYQVMKNKGTH-EGCIEQMQRLFSDKLYGHSRIPLDSERLIRMDDW 341

>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47|
          Length = 641

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 146 AAKAGNLLPF-LMCMKQQRDFSSSHLQACLSCPPHLSSPALLGHAKMP 286
           A   G  LP  L C+     F S+HL       PH  SPAL GH  +P
Sbjct: 135 ACPEGAALPAALSCLSCLASFCSAHLA------PHERSPALRGHRLVP 176


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,711,057
Number of Sequences: 219361
Number of extensions: 1072376
Number of successful extensions: 3097
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3094
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)