>URE1_NOCFA (Q5YWR8) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase|
           alpha subunit)
          Length = 573

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 189 AVHDGXKIMRPSLGRSGVTNADGGP 263
           AV  G K++R S+G+S  T ADG P
Sbjct: 47  AVFGGGKVLRESMGQSRATRADGAP 71

>COT2_MOUSE (P43135) COUP transcription factor 2 (COUP-TF2) (COUP-TF II)|
           (Apolipoprotein AI regulatory protein 1) (ARP-1)
          Length = 414

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 349 AAVNGTMFCPDXEVDSSLGXRFNQIDFGAGPP-SAFVTPDLPNEGLMIFXPSCTASGG 179
           A V  T   P  EV  S G + +Q     GPP  A  TP  P +G     P+ TA+GG
Sbjct: 2   AMVVSTWRDPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGG 59

>COT2_HUMAN (P24468) COUP transcription factor 2 (COUP-TF2) (COUP-TF II)|
           (Apolipoprotein AI regulatory protein 1) (ARP-1)
          Length = 414

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 349 AAVNGTMFCPDXEVDSSLGXRFNQIDFGAGPP-SAFVTPDLPNEGLMIFXPSCTASGG 179
           A V  T   P  EV  S G + +Q     GPP  A  TP  P +G     P+ TA+GG
Sbjct: 2   AMVVSTWRDPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGG 59

>COT2_BOVIN (Q9TTR7) COUP transcription factor 2 (COUP-TF2) (COUP-TF II)|
          Length = 414

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -2

Query: 349 AAVNGTMFCPDXEVDSSLGXRFNQIDFGAGPP-SAFVTPDLPNEGLMIFXPSCTASGG 179
           A V  T   P  EV  S G + +Q     GPP  A  TP  P +G     P+ TA+GG
Sbjct: 2   AMVVSTWRDPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGG 59

>MRAZ_MOOTA (Q2RK88) Protein mraZ|
          Length = 143

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = +2

Query: 287 PXTQAAVHLXVR-----AEHCAVDRRRGRELLPGGIRYAAEVHERLDVLGV 424
           P T+A     VR     A  C +DR+ GR LLPG +R  A + + + V+GV
Sbjct: 59  PFTRADARAFVRFFFSGATECELDRQ-GRILLPGNLREYARLDKEVVVVGV 108

>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1)
          Length = 445

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 22/94 (23%), Positives = 42/94 (44%)
 Frame = -2

Query: 427 VDAEYIQSFVDFGSVADAAGEELPATAAVNGTMFCPDXEVDSSLGXRFNQIDFGAGPPSA 248
           +D +Y++S +D        G  +P   +   T++ P+  V+S     +  +DFG G P+ 
Sbjct: 344 LDDDYLRSAIDH--TESKPGLPVPYMGSPEKTLY-PNVLVNSWGRIPYQAMDFGWGSPTF 400

Query: 247 FVTPDLPNEGLMIFXPSCTASGGVDLVMAIPEDH 146
           F   ++  +G     PS    G + L + +   H
Sbjct: 401 FGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSH 434

>PGCA_BOVIN (P13608) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2364

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
 Frame = -2

Query: 415  YIQSFVDFGSVADAAG--EELPATAAVNGTMFCPDXEVDSSLGXRFNQIDFGAGPPSAFV 242
            Y ++ V   +  +A+G     P  +    T    D E  S LG   +   F  GP     
Sbjct: 1939 YPEAEVGASAAPEASGGASGSPNLSETTSTFHEADLEGTSGLGVSGSPSAFPEGPTEGLA 1998

Query: 241  TPDLPNEGLMIFXPSCTASG 182
            TP++  E    F  S  ASG
Sbjct: 1999 TPEVSGESTTAFDVSVEASG 2018

>ADH2_ENTHI (Q24803) Aldehyde-alcohol dehydrogenase 2 [Includes: Alcohol|
           dehydrogenase (EC 1.1.1.1) (ADH); Acetaldehyde
           dehydrogenase (EC 1.2.1.10) (ACDH)]
          Length = 870

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 250 AFVTPDLPNEGLMIFXPSCTASGGVDLVMAIPEDHDTATFYTLAD 116
           AF  P +  +  +I  P+ + +G      A+  DH+T   Y LAD
Sbjct: 590 AFKFPTMGKKARLICIPTTSGTGSEVTPFAVISDHETGKKYPLAD 634

>URE12_STRAW (Q826R9) Urease alpha subunit 2 (EC 3.5.1.5) (Urea amidohydrolase|
           alpha subunit 2)
          Length = 573

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 189 AVHDGXKIMRPSLGRSGVTNADGGP 263
           AV  G K++R S+G++  T ADG P
Sbjct: 47  AVFGGGKVIRESMGQARATRADGTP 71

>COT2_RAT (O09018) COUP transcription factor 2 (COUP-TF2) (COUP-TF II)|
           (Apolipoprotein AI regulatory protein 1) (ARP-1)
           (Ovalbumin upstream promoter beta nuclear receptor)
           (COUPb)
          Length = 414

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -2

Query: 349 AAVNGTMFCPDXEVDSSLGXRFNQIDFGAGPP-SAFVTPDLPNEGLMIFXPSCTASG 182
           A V  T   P  EV  S G + +Q     GPP  A  TP  P +G     P+ TA+G
Sbjct: 2   AMVVSTWRDPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAG 58


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,644,101
Number of Sequences: 219361
Number of extensions: 941042
Number of successful extensions: 2651
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2649
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)