Clone Name | rbart06e02 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HEM2_MYCTU (O33357) Delta-aminolevulinic acid dehydratase (EC 4.... | 31 | 1.9 | 2 | HEM2_MYCLE (P46723) Delta-aminolevulinic acid dehydratase (EC 4.... | 30 | 4.1 | 3 | HEM2_STRCO (P54919) Delta-aminolevulinic acid dehydratase (EC 4.... | 28 | 9.2 |
---|
>HEM2_MYCTU (O33357) Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)| (Porphobilinogen synthase) (ALAD) (ALADH) Length = 329 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -1 Query: 305 AGAFDGPFREAV--SMLSKRRTYLQE 234 A AF GPFREAV S+ RRTY QE Sbjct: 204 ASAFYGPFREAVSSSLSGDRRTYQQE 229
>HEM2_MYCLE (P46723) Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)| (Porphobilinogen synthase) (ALAD) (ALADH) Length = 329 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/26 (61%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -1 Query: 305 AGAFDGPFREAV--SMLSKRRTYLQE 234 + AF GPFREAV S+ RRTY QE Sbjct: 204 SSAFYGPFREAVSCSLSGDRRTYQQE 229
>HEM2_STRCO (P54919) Delta-aminolevulinic acid dehydratase (EC 4.2.1.24)| (Porphobilinogen synthase) (ALAD) (ALADH) Length = 330 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -1 Query: 305 AGAFDGPFREAV--SMLSKRRTYLQE 234 A AF GPFREAV S+ R+TY Q+ Sbjct: 205 ASAFYGPFREAVGSSLKGDRKTYQQD 230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,397,093 Number of Sequences: 219361 Number of extensions: 947312 Number of successful extensions: 2450 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2369 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2448 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)