ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart06d10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY437442.1| Triticum aestivum cultivar Ning 7840 cytochrome P450 mRNA, complete cds Length = 1620 Score = 458 bits (231), Expect = e-126 Identities = 354/395 (89%) Strand = Plus / Minus Query: 67 tctacatctctgggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatca 126 |||||||||| ||||||| |||| ||| |||||||||||||| || ||||||||||||| Sbjct: 1572 tctacatctcgaggctcttgaggaccataggaagcccaaacttaggccgcagcgtgatca 1513 Query: 127 cgtccatcggggcatggacatacttaggtgatagggagaacgagaacctctgaagaatca 186 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1512 cgtccatcggggcatgaacatacttaggtgatagggagaacgagaacctctgaagaatca 1453 Query: 187 tggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaagacctgggtc 246 ||||||||||||||||||||| ||||| ||||| || ||||||||||| ||||| || | Sbjct: 1452 cggcgatcacggccttggcctcgatcattgcaaaattctgccctatgcatgacctcggcc 1393 Query: 247 cacttgagaaagacaacaaggcattggggtgttttccggcccgtgtcactccattctcaa 306 |||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| | Sbjct: 1392 cactagagaaagacaacaaggcattggggtgctttccggccctcgtcactccattctcga 1333 Query: 307 acctcaaaggcttgaactcattggcgtcctcaccccagacctccttgtcacgatgtatcg 366 |||||| |||||||| || ||||| || || ||||| |||||||||||||||||||||| Sbjct: 1332 acctcattggcttgaattcgttggcatcttctccccatacctccttgtcacgatgtatcg 1273 Query: 367 ttgcgatggggattgtgatgactgtgcctttgggcactttgatgccaccgacctcgagat 426 | ||||||||||| || | ||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 1272 tcgcgatggggatcgtcaagaccgtgccttcaggcactttgatgccaccaacctcgagat 1213 Query: 427 ctgaacctgcctttctctgaatggccgctacaggg 461 | ||||| ||||| ||||||||||||| ||||||| Sbjct: 1212 ccgaacccgccttcctctgaatggccgatacaggg 1178
>gb|AY641449.1| Triticum aestivum cultivar Darius cytochrome P450 CYP709C1 (CYP709C1) mRNA, complete cds Length = 1798 Score = 444 bits (224), Expect = e-121 Identities = 350/392 (89%) Strand = Plus / Minus Query: 69 tacatctctgggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacg 128 ||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 1632 tacatctctaggctcttgaggatcatgggaagcccaaacttaggccgcagcgtgatcaca 1573 Query: 129 tccatcggggcatggacatacttaggtgatagggagaacgagaacctctgaagaatcatg 188 ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| | Sbjct: 1572 tccatgggggcatggacatactttggtgatagggagaatgagaacctctgaagaatcacg 1513 Query: 189 gcgatcacggccttggcctctatcatagcaaagttttgccctatgcaagacctgggtcca 248 |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||| || ||| Sbjct: 1512 gcgatcacggccttggcctcgatcattgcaaagttctgccctatgcatgacctcggccca 1453 Query: 249 cttgagaaagacaacaaggcattggggtgttttccggcccgtgtcactccattctcaaac 308 || ||||||||||| || ||||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 1452 ctggagaaagacaataatgcattggggtgctttccggcccttgtcactccattctcgaac 1393 Query: 309 ctcaaaggcttgaactcattggcgtcctcaccccagacctccttgtcacgatgtatcgtt 368 |||| ||||||||| | ||||| || || ||||||||||||||||| ||||||||||| Sbjct: 1392 ctcataggcttgaatttgttggcatcttctccccagacctccttgtcgcgatgtatcgtc 1333 Query: 369 gcgatggggattgtgatgactgtgcctttgggcactttgatgccaccgacctcgagatct 428 ||||||||||| || | || ||||||| || ||||||||||||||| ||||||||||| Sbjct: 1332 gcgatggggatcgttaggaacgtgccttcggtcactttgatgccaccaacctcgagatcc 1273 Query: 429 gaacctgcctttctctgaatggccgctacagg 460 ||||| ||||| ||||||||||||| |||||| Sbjct: 1272 gaacccgccttcctctgaatggccgatacagg 1241
>ref|XM_477684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1838 Score = 99.6 bits (50), Expect = 8e-18 Identities = 146/178 (82%) Strand = Plus / Minus Query: 79 ggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcgggg 138 ||||||| |||||||| || ||||| ||||||| |||||||||||||| || | || | Sbjct: 1661 ggctcttgaggatcatagggagcccgtacttgggacgcagcgtgatcacatcagtgggtg 1602 Query: 139 catggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacgg 198 ||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || | Sbjct: 1601 catggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgacag 1542 Query: 199 ccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 256 |||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 1541 ccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaa 1484
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 99.6 bits (50), Expect = 8e-18 Identities = 146/178 (82%) Strand = Plus / Minus Query: 79 ggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcgggg 138 ||||||| |||||||| || ||||| ||||||| |||||||||||||| || | || | Sbjct: 13272473 ggctcttgaggatcatagggagcccgtacttgggacgcagcgtgatcacatcagtgggtg 13272414 Query: 139 catggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacgg 198 ||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || | Sbjct: 13272413 catggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgacag 13272354 Query: 199 ccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 256 |||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 13272353 ccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaa 13272296 Score = 97.6 bits (49), Expect = 3e-17 Identities = 238/301 (79%) Strand = Plus / Plus Query: 79 ggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcgggg 138 ||||||| |||||||| || ||||| ||||||| ||||||||||| || || | || | Sbjct: 13329263 ggctcttgaggatcatagggagcccgtacttgggacgcagcgtgataacatcagtgggtg 13329322 Query: 139 catggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacgg 198 ||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || | Sbjct: 13329323 catggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgacag 13329382 Query: 199 ccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaaag 258 |||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| | Sbjct: 13329383 ccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaagg 13329442 Query: 259 acaacaaggcattggggtgttttccggcccgtgtcactccattctcaaacctcaaaggct 318 | | | || |||||||| || | |||| ||||| |||||||| |||||| ||| Sbjct: 13329443 agagtagcgcgttggggtgcttcgctgccctcgtcaccccattctcgaacctctccggcc 13329502 Query: 319 tgaactcattggcgtcctcaccccagacctccttgtcacgatgtatcgttgcgatgggga 378 | ||||||| || ||||| ||||| || ||||||||||| || || |||||||| |||| Sbjct: 13329503 taaactcatccgcatcctccccccacacttccttgtcacggtgaattgttgcgatcggga 13329562 Query: 379 t 379 | Sbjct: 13329563 t 13329563 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 293 cactccattctcaaacctcaaaggcttgaactcattggcgtcctcaccccagacctcctt 352 |||||||||||| |||||| ||||||||||| | ||||||||||||||| || ||||| Sbjct: 26315115 cactccattctcgaacctcgccggcttgaactcgtcggcgtcctcaccccacacttcctt 26315056 Query: 353 gtcacgatgtatcgttgcgatggggat 379 ||||||||| || |||||||| ||||| Sbjct: 26315055 gtcacgatggattgttgcgattgggat 26315029 Score = 79.8 bits (40), Expect = 7e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 81 ctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggggca 140 ||||| |||||||| || |||||| |||| || || |||||||||||||| | || | Sbjct: 26330865 ctcttgaggatcataggcagcccatactttggccgaagcgtgatcacgtcggttggcacg 26330806 Query: 141 tggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacggcc 200 ||||| ||||| |||||||| | || ||||||||||| || ||||| || || |||||| Sbjct: 26330805 tggacgtacttgggtgatagagtaaaggagaacctctgtaggatcattgcaattacggcc 26330746 Query: 201 ttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 256 |||||||| ||||| || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct: 26330745 ttggcctcgatcatggcgaagttctgcccaatgcatgccctcggcccactggagaa 26330690 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 293 cactccattctcaaacctcaaaggcttgaactcattggcgtcctcaccccagacctcctt 352 |||||||||||| ||||| ||||||||||||| ||||||||| ||||| || ||||| Sbjct: 26323595 cactccattctcggacctctctggcttgaactcatcggcgtcctccccccacacttcctt 26323536 Query: 353 gtcacgatgtatcgttgcgatggggat 379 |||||| || || |||||||| ||||| Sbjct: 26323535 gtcacggtggattgttgcgatcgggat 26323509 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||||| || || ||||||||||| | || | ||||||| ||||| |||||||||||| Sbjct: 26323720 gagaacctttgcaggatcatggcgatgatggtcctggcctcgatcatggcaaagttttgc 26323661 Query: 228 cctatgcaagacct 241 || ||||| ||||| Sbjct: 26323660 ccgatgcacgacct 26323647 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 ||||||||||| || ||||||| ||| ||||| |||||||| ||||| || || || ||| Sbjct: 26315240 gagaacctctgcaggatcatggtgatgacggctttggcctcaatcatggcgaaattctgc 26315181 Query: 228 cctatgcaagacct 241 || ||||| ||||| Sbjct: 26315180 ccgatgcatgacct 26315167
>dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0025D09 Length = 142593 Score = 99.6 bits (50), Expect = 8e-18 Identities = 146/178 (82%) Strand = Plus / Minus Query: 79 ggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcgggg 138 ||||||| |||||||| || ||||| ||||||| |||||||||||||| || | || | Sbjct: 60336 ggctcttgaggatcatagggagcccgtacttgggacgcagcgtgatcacatcagtgggtg 60277 Query: 139 catggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacgg 198 ||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || | Sbjct: 60276 catggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgacag 60217 Query: 199 ccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 256 |||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 60216 ccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaa 60159 Score = 97.6 bits (49), Expect = 3e-17 Identities = 238/301 (79%) Strand = Plus / Plus Query: 79 ggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcgggg 138 ||||||| |||||||| || ||||| ||||||| ||||||||||| || || | || | Sbjct: 117126 ggctcttgaggatcatagggagcccgtacttgggacgcagcgtgataacatcagtgggtg 117185 Query: 139 catggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacgg 198 ||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || | Sbjct: 117186 catggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgacag 117245 Query: 199 ccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaaag 258 |||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| | Sbjct: 117246 ccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaagg 117305 Query: 259 acaacaaggcattggggtgttttccggcccgtgtcactccattctcaaacctcaaaggct 318 | | | || |||||||| || | |||| ||||| |||||||| |||||| ||| Sbjct: 117306 agagtagcgcgttggggtgcttcgctgccctcgtcaccccattctcgaacctctccggcc 117365 Query: 319 tgaactcattggcgtcctcaccccagacctccttgtcacgatgtatcgttgcgatgggga 378 | ||||||| || ||||| ||||| || ||||||||||| || || |||||||| |||| Sbjct: 117366 taaactcatccgcatcctccccccacacttccttgtcacggtgaattgttgcgatcggga 117425 Query: 379 t 379 | Sbjct: 117426 t 117426
>dbj|AK119557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-106-A06, full insert sequence Length = 1945 Score = 99.6 bits (50), Expect = 8e-18 Identities = 146/178 (82%) Strand = Plus / Minus Query: 79 ggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcgggg 138 ||||||| |||||||| || ||||| ||||||| |||||||||||||| || | || | Sbjct: 1755 ggctcttgaggatcatagggagcccgtacttgggacgcagcgtgatcacatcagtgggtg 1696 Query: 139 catggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacgg 198 ||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || | Sbjct: 1695 catggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgacag 1636 Query: 199 ccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 256 |||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 1635 ccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaa 1578
>dbj|AK072220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013166A09, full insert sequence Length = 1838 Score = 99.6 bits (50), Expect = 8e-18 Identities = 146/178 (82%) Strand = Plus / Minus Query: 79 ggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcgggg 138 ||||||| |||||||| || ||||| ||||||| |||||||||||||| || | || | Sbjct: 1661 ggctcttgaggatcatagggagcccgtacttgggacgcagcgtgatcacatcagtgggtg 1602 Query: 139 catggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacgg 198 ||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || | Sbjct: 1601 catggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgacag 1542 Query: 199 ccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 256 |||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 1541 ccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaa 1484
>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_B01 Length = 105736 Score = 97.6 bits (49), Expect = 3e-17 Identities = 238/301 (79%) Strand = Plus / Plus Query: 79 ggctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcgggg 138 ||||||| |||||||| || ||||| ||||||| ||||||||||| || || | || | Sbjct: 43701 ggctcttgaggatcatagggagcccgtacttgggacgcagcgtgataacatcagtgggtg 43760 Query: 139 catggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacgg 198 ||||||| ||||| || || | | ||| ||||||||||| || |||||||| || || | Sbjct: 43761 catggacgtacttgggggacaaagtgaaggagaacctctgtaggatcatggcaatgacag 43820 Query: 199 ccttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaaag 258 |||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| | Sbjct: 43821 ccttggcctcgatcattgcaaagttctgcccaatgcatgacctcggtccgctggagaagg 43880 Query: 259 acaacaaggcattggggtgttttccggcccgtgtcactccattctcaaacctcaaaggct 318 | | | || |||||||| || | |||| ||||| |||||||| |||||| ||| Sbjct: 43881 agagtagcgcgttggggtgcttcgctgccctcgtcaccccattctcgaacctctccggcc 43940 Query: 319 tgaactcattggcgtcctcaccccagacctccttgtcacgatgtatcgttgcgatgggga 378 | ||||||| || ||||| ||||| || ||||||||||| || || |||||||| |||| Sbjct: 43941 taaactcatccgcatcctccccccacacttccttgtcacggtgaattgttgcgatcggga 44000 Query: 379 t 379 | Sbjct: 44001 t 44001
>ref|NM_193131.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 293 cactccattctcaaacctcaaaggcttgaactcattggcgtcctcaccccagacctcctt 352 |||||||||||| |||||| ||||||||||| | ||||||||||||||| || ||||| Sbjct: 1326 cactccattctcgaacctcgccggcttgaactcgtcggcgtcctcaccccacacttcctt 1267 Query: 353 gtcacgatgtatcgttgcgatggggat 379 ||||||||| || |||||||| ||||| Sbjct: 1266 gtcacgatggattgttgcgattgggat 1240 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 ||||||||||| || ||||||| ||| ||||| |||||||| ||||| || || || ||| Sbjct: 1451 gagaacctctgcaggatcatggtgatgacggctttggcctcaatcatggcgaaattctgc 1392 Query: 228 cctatgcaagacct 241 || ||||| ||||| Sbjct: 1391 ccgatgcatgacct 1378
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 293 cactccattctcaaacctcaaaggcttgaactcattggcgtcctcaccccagacctcctt 352 |||||||||||| |||||| ||||||||||| | ||||||||||||||| || ||||| Sbjct: 89743 cactccattctcgaacctcgccggcttgaactcgtcggcgtcctcaccccacacttcctt 89684 Query: 353 gtcacgatgtatcgttgcgatggggat 379 ||||||||| || |||||||| ||||| Sbjct: 89683 gtcacgatggattgttgcgattgggat 89657 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 293 cactccattctcaaacctcaaaggcttgaactcattggcgtcctcaccccagacctcctt 352 |||||||||||| ||||| ||||||||||||| ||||||||| ||||| || ||||| Sbjct: 98223 cactccattctcggacctctctggcttgaactcatcggcgtcctccccccacacttcctt 98164 Query: 353 gtcacgatgtatcgttgcgatggggat 379 |||||| || || |||||||| ||||| Sbjct: 98163 gtcacggtggattgttgcgatcgggat 98137 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||||| || || ||||||||||| | || | ||||||| ||||| |||||||||||| Sbjct: 98348 gagaacctttgcaggatcatggcgatgatggtcctggcctcgatcatggcaaagttttgc 98289 Query: 228 cctatgcaagacct 241 || ||||| ||||| Sbjct: 98288 ccgatgcacgacct 98275 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 ||||||||||| || ||||||| ||| ||||| |||||||| ||||| || || || ||| Sbjct: 89868 gagaacctctgcaggatcatggtgatgacggctttggcctcaatcatggcgaaattctgc 89809 Query: 228 cctatgcaagacct 241 || ||||| ||||| Sbjct: 89808 ccgatgcatgacct 89795
>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1332_C12 Length = 67349 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 293 cactccattctcaaacctcaaaggcttgaactcattggcgtcctcaccccagacctcctt 352 |||||||||||| |||||| ||||||||||| | ||||||||||||||| || ||||| Sbjct: 34693 cactccattctcgaacctcgccggcttgaactcgtcggcgtcctcaccccacacttcctt 34634 Query: 353 gtcacgatgtatcgttgcgatggggat 379 ||||||||| || |||||||| ||||| Sbjct: 34633 gtcacgatggattgttgcgattgggat 34607 Score = 79.8 bits (40), Expect = 7e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 81 ctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggggca 140 ||||| |||||||| || |||||| |||| || || |||||||||||||| | || | Sbjct: 50443 ctcttgaggatcataggcagcccatactttggccgaagcgtgatcacgtcggttggcacg 50384 Query: 141 tggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacggcc 200 ||||| ||||| |||||||| | || ||||||||||| || ||||| || || |||||| Sbjct: 50383 tggacgtacttgggtgatagagtaaaggagaacctctgtaggatcattgcaattacggcc 50324 Query: 201 ttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 256 |||||||| ||||| || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct: 50323 ttggcctcgatcatggcgaagttctgcccaatgcatgccctcggcccactggagaa 50268 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 293 cactccattctcaaacctcaaaggcttgaactcattggcgtcctcaccccagacctcctt 352 |||||||||||| ||||| ||||||||||||| ||||||||| ||||| || ||||| Sbjct: 43173 cactccattctcggacctctctggcttgaactcatcggcgtcctccccccacacttcctt 43114 Query: 353 gtcacgatgtatcgttgcgatggggat 379 |||||| || || |||||||| ||||| Sbjct: 43113 gtcacggtggattgttgcgatcgggat 43087 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||||| || || ||||||||||| | || | ||||||| ||||| |||||||||||| Sbjct: 43298 gagaacctttgcaggatcatggcgatgatggtcctggcctcgatcatggcaaagttttgc 43239 Query: 228 cctatgcaagacct 241 || ||||| ||||| Sbjct: 43238 ccgatgcacgacct 43225 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 ||||||||||| || ||||||| ||| ||||| |||||||| ||||| || || || ||| Sbjct: 34818 gagaacctctgcaggatcatggtgatgacggctttggcctcaatcatggcgaaattctgc 34759 Query: 228 cctatgcaagacct 241 || ||||| ||||| Sbjct: 34758 ccgatgcatgacct 34745
>ref|NM_193135.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1895 Score = 79.8 bits (40), Expect = 7e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 81 ctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggggca 140 ||||| |||||||| || |||||| |||| || || |||||||||||||| | || | Sbjct: 1716 ctcttgaggatcataggcagcccatactttggccgaagcgtgatcacgtcggttggcacg 1657 Query: 141 tggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacggcc 200 ||||| ||||| |||||||| | || ||||||||||| || ||||| || || |||||| Sbjct: 1656 tggacgtacttgggtgatagagtaaaggagaacctctgtaggatcattgcaattacggcc 1597 Query: 201 ttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 256 |||||||| ||||| || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct: 1596 ttggcctcgatcatggcgaagttctgcccaatgcatgccctcggcccactggagaa 1541
>dbj|AK121733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033083C10, full insert sequence Length = 1914 Score = 79.8 bits (40), Expect = 7e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 81 ctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggggca 140 ||||| |||||||| || |||||| |||| || || |||||||||||||| | || | Sbjct: 1717 ctcttgaggatcataggcagcccatactttggccgaagcgtgatcacgtcggttggcacg 1658 Query: 141 tggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacggcc 200 ||||| ||||| |||||||| | || ||||||||||| || ||||| || || |||||| Sbjct: 1657 tggacgtacttgggtgatagagtaaaggagaacctctgtaggatcattgcaattacggcc 1598 Query: 201 ttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 256 |||||||| ||||| || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct: 1597 ttggcctcgatcatggcgaagttctgcccaatgcatgccctcggcccactggagaa 1542
>dbj|AK106081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A08, full insert sequence Length = 1895 Score = 79.8 bits (40), Expect = 7e-12 Identities = 142/176 (80%) Strand = Plus / Minus Query: 81 ctcttaaggatcatgggaagcccaaacttgggtcgcagcgtgatcacgtccatcggggca 140 ||||| |||||||| || |||||| |||| || || |||||||||||||| | || | Sbjct: 1716 ctcttgaggatcataggcagcccatactttggccgaagcgtgatcacgtcggttggcacg 1657 Query: 141 tggacatacttaggtgatagggagaacgagaacctctgaagaatcatggcgatcacggcc 200 ||||| ||||| |||||||| | || ||||||||||| || ||||| || || |||||| Sbjct: 1656 tggacgtacttgggtgatagagtaaaggagaacctctgtaggatcattgcaattacggcc 1597 Query: 201 ttggcctctatcatagcaaagttttgccctatgcaagacctgggtccacttgagaa 256 |||||||| ||||| || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct: 1596 ttggcctcgatcatggcgaagttctgcccaatgcatgccctcggcccactggagaa 1541
>ref|NM_193133.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1524 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 293 cactccattctcaaacctcaaaggcttgaactcattggcgtcctcaccccagacctcctt 352 |||||||||||| ||||| ||||||||||||| ||||||||| ||||| || ||||| Sbjct: 1287 cactccattctcggacctctctggcttgaactcatcggcgtcctccccccacacttcctt 1228 Query: 353 gtcacgatgtatcgttgcgatggggat 379 |||||| || || |||||||| ||||| Sbjct: 1227 gtcacggtggattgttgcgatcgggat 1201 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||||| || || ||||||||||| | || | ||||||| ||||| |||||||||||| Sbjct: 1412 gagaacctttgcaggatcatggcgatgatggtcctggcctcgatcatggcaaagttttgc 1353 Query: 228 cctatgcaagacct 241 || ||||| ||||| Sbjct: 1352 ccgatgcacgacct 1339
>ref|NM_130263.2| Arabidopsis thaliana CYP709B2; heme binding / iron ion binding / monooxygenase/ oxygen binding AT2G46950 (CYP709B2) mRNA, complete cds Length = 2120 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 177 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 236 |||||||||||||||| |||| |||||| || || || ||||||||||| || |||||| Sbjct: 1683 tgaagaatcatggcgagaacggtcttggcttccattatcgcaaagttttggccaatgcaa 1624 Query: 237 g 237 | Sbjct: 1623 g 1623
>gb|BT014808.1| Arabidopsis thaliana At2g46950 gene, complete cds Length = 1554 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 177 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 236 |||||||||||||||| |||| |||||| || || || ||||||||||| || |||||| Sbjct: 1445 tgaagaatcatggcgagaacggtcttggcttccattatcgcaaagttttggccaatgcaa 1386 Query: 237 g 237 | Sbjct: 1385 g 1385
>gb|BT011625.1| Arabidopsis thaliana At2g46950 mRNA, complete cds Length = 1742 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 177 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 236 |||||||||||||||| |||| |||||| || || || ||||||||||| || |||||| Sbjct: 1540 tgaagaatcatggcgagaacggtcttggcttccattatcgcaaagttttggccaatgcaa 1481 Query: 237 g 237 | Sbjct: 1480 g 1480
>gb|AC004411.3| Arabidopsis thaliana chromosome 2 clone F14M4 map CIC06C03, complete sequence Length = 106329 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 177 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 236 |||||||||||||||| |||| |||||| || || || ||||||||||| || |||||| Sbjct: 70004 tgaagaatcatggcgagaacggtcttggcttccattatcgcaaagttttggccaatgcaa 69945 Query: 237 g 237 | Sbjct: 69944 g 69944 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Minus Query: 177 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 236 ||||||||||||| || ||| | |||||| || ||||| |||||||||| || |||||| Sbjct: 67172 tgaagaatcatggtgagcacagtcttggcttcgatcatgacaaagttttggccaatgcaa 67113 Query: 237 g 237 | Sbjct: 67112 g 67112
>emb|BX820881.1|CNS0A83L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2120 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 177 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 236 |||||||||||||||| |||| |||||| || || || ||||||||||| || |||||| Sbjct: 1683 tgaagaatcatggcgagaacggtcttggcttccattatcgcaaagttttggccaatgcaa 1624 Query: 237 g 237 | Sbjct: 1623 g 1623
>ref|NM_184934.1| Oryza sativa (japonica cultivar-group), mRNA Length = 631 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 318 ttgaactcattggcgtcctcaccccagacctccttgtc 355 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 153 ttgaactcatcggcatcgtcaccccaaacctccttgtc 190 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 3 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 62 Query: 228 cctatgcaagacctgggtccacttgagaa 256 || ||||| ||||| ||||| ||||||| Sbjct: 63 ccgatgcatgaccttggtcctattgagaa 91
>ref|NM_184933.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1850 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 318 ttgaactcattggcgtcctcaccccagacctccttgtc 355 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 1307 ttgaactcatcggcatcgtcaccccaaacctccttgtc 1270 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 1457 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 1398 Query: 228 cctatgcaagacctgggtccacttgagaa 256 || ||||| ||||| ||||| ||||||| Sbjct: 1397 ccgatgcatgaccttggtcctattgagaa 1369
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 318 ttgaactcattggcgtcctcaccccagacctccttgtc 355 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 14394164 ttgaactcatcggcatcgtcaccccaaacctccttgtc 14394127 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 14394314 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 14394255 Query: 228 cctatgcaagacctgggtccacttgagaa 256 || ||||| ||||| ||||| ||||||| Sbjct: 14394254 ccgatgcatgaccttggtcctattgagaa 14394226
>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3, complete sequence Length = 114882 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 371 gatggggattgtgatgactgtgcctttgggcact 404 |||||||||||| |||||||| || ||||||||| Sbjct: 45172 gatggggattgttatgactgttccattgggcact 45139
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 318 ttgaactcattggcgtcctcaccccagacctccttgtc 355 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 143393 ttgaactcatcggcatcgtcaccccaaacctccttgtc 143356 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 143543 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 143484 Query: 228 cctatgcaagacctgggtccacttgagaa 256 || ||||| ||||| ||||| ||||||| Sbjct: 143483 ccgatgcatgaccttggtcctattgagaa 143455
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 318 ttgaactcattggcgtcctcaccccagacctccttgtc 355 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 14389139 ttgaactcatcggcatcgtcaccccaaacctccttgtc 14389102 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 14389289 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 14389230 Query: 228 cctatgcaagacctgggtccacttgagaa 256 || ||||| ||||| ||||| ||||||| Sbjct: 14389229 ccgatgcatgaccttggtcctattgagaa 14389201
>dbj|AK120700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170M24, full insert sequence Length = 2167 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 318 ttgaactcattggcgtcctcaccccagacctccttgtc 355 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 1342 ttgaactcatcggcatcgtcaccccaaacctccttgtc 1305 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 1492 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 1433 Query: 228 cctatgcaagacctgggtccacttgagaa 256 || ||||| ||||| ||||| ||||||| Sbjct: 1432 ccgatgcatgaccttggtcctattgagaa 1404
>dbj|AK101513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E16, full insert sequence Length = 1849 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 318 ttgaactcattggcgtcctcaccccagacctccttgtc 355 |||||||||| ||| || |||||||| ||||||||||| Sbjct: 1395 ttgaactcatcggcatcgtcaccccaaacctccttgtc 1358 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Minus Query: 168 gagaacctctgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgc 227 |||||| |||| || |||||||| ||||| ||| || |||| ||| ||||||||||| Sbjct: 1545 gagaacttctgcaggatcatggccatcaccaactttgcttctaacattgcaaagttttga 1486 Query: 228 cctatgcaagacctgggtccacttgagaa 256 || ||||| ||||| ||||| ||||||| Sbjct: 1485 ccgatgcatgaccttggtcctattgagaa 1457
>ref|NM_180134.1| Arabidopsis thaliana CYP709B1; heme binding / iron ion binding / monooxygenase/ oxygen binding AT2G46960 (CYP709B1) transcript variant AT2G46960.1 mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Minus Query: 177 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 236 ||||||||||||| || ||| | |||||| || ||||| |||||||||| || |||||| Sbjct: 1244 tgaagaatcatggtgagcacagtcttggcttcgatcatgacaaagttttggccaatgcaa 1185 Query: 237 g 237 | Sbjct: 1184 g 1184
>ref|NM_130264.1| Arabidopsis thaliana CYP709B1; heme binding / iron ion binding / monooxygenase/ oxygen binding AT2G46960 (CYP709B1) transcript variant AT2G46960.2 mRNA, complete cds Length = 1854 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Minus Query: 177 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 236 ||||||||||||| || ||| | |||||| || ||||| |||||||||| || |||||| Sbjct: 1496 tgaagaatcatggtgagcacagtcttggcttcgatcatgacaaagttttggccaatgcaa 1437 Query: 237 g 237 | Sbjct: 1436 g 1436
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 cgatcacggccttggcctctatcat 214 ||||||||||||||||||| ||||| Sbjct: 1132008 cgatcacggccttggcctcgatcat 1131984
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 cgatcacggccttggcctctatcat 214 ||||||||||||||||||| ||||| Sbjct: 98177 cgatcacggccttggcctcgatcat 98153
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 cgatcacggccttggcctctatcat 214 ||||||||||||||||||| ||||| Sbjct: 145416 cgatcacggccttggcctcgatcat 145392
>gb|AY091688.1| Arabidopsis thaliana At2g46960/F14M4.21 mRNA, complete cds Length = 1560 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Minus Query: 177 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 236 ||||||||||||| || ||| | |||||| || ||||| |||||||||| || |||||| Sbjct: 1448 tgaagaatcatggtgagcacagtcttggcttcgatcatgacaaagttttggccaatgcaa 1389 Query: 237 g 237 | Sbjct: 1388 g 1388
>gb|AF367329.1| Arabidopsis thaliana At2g46960/F14M4.21 mRNA, complete cds Length = 1855 Score = 42.1 bits (21), Expect = 1.6 Identities = 51/61 (83%) Strand = Plus / Minus Query: 177 tgaagaatcatggcgatcacggccttggcctctatcatagcaaagttttgccctatgcaa 236 ||||||||||||| || ||| | |||||| || ||||| |||||||||| || |||||| Sbjct: 1496 tgaagaatcatggtgagcacagtcttggcttcgatcatgacaaagttttggccaatgcaa 1437 Query: 237 g 237 | Sbjct: 1436 g 1436
>gb|AC068538.8| Homo sapiens BAC clone RP11-141G4 from 2, complete sequence Length = 173169 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 tttgcgataagaccaataaataaac 41 ||||| ||||||||||||||||||| Sbjct: 110150 tttgccataagaccaataaataaac 110174
>gb|AC131099.4| Mus musculus BAC clone RP23-15N12 from chromosome 13, complete sequence Length = 208298 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 tggcctctatcatagcaaag 221 |||||||||||||||||||| Sbjct: 37098 tggcctctatcatagcaaag 37117
>gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosome 1, complete sequence Length = 177161 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 caaccttgtgttgtactcaa 60 |||||||||||||||||||| Sbjct: 66726 caaccttgtgttgtactcaa 66707
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 183 atcatggcgatcacggccttggcc 206 |||||||||||| ||||||||||| Sbjct: 240359 atcatggcgatctcggccttggcc 240336
>ref|XM_504406.1| Yarrowia lipolytica CLIB122, YALI0E25982g predicted mRNA Length = 1572 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gcgtcctcaccccagacctccttg 353 |||||||||||||||| ||||||| Sbjct: 1292 gcgtcctcaccccagaactccttg 1269
>gb|AY286203.1| Amazona aestiva cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1002 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ggattgtgatgactgtgcct 395 |||||||||||||||||||| Sbjct: 310 ggattgtgatgactgtgcct 291
>emb|AL929167.10| Mouse DNA sequence from clone RP23-5F14 on chromosome 2, complete sequence Length = 148751 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 aaaggcttgaactcattggc 331 |||||||||||||||||||| Sbjct: 39635 aaaggcttgaactcattggc 39654
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 gcgtcctcaccccagacctccttg 353 |||||||||||||||| ||||||| Sbjct: 3083553 gcgtcctcaccccagaactccttg 3083576
>dbj|AB010388.1| Yarrowia lipolytica gene for ALK1, complete cds Length = 3578 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 gcgtcctcaccccagacctccttg 353 |||||||||||||||| ||||||| Sbjct: 2934 gcgtcctcaccccagaactccttg 2911 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,793,485 Number of Sequences: 3902068 Number of extensions: 3793485 Number of successful extensions: 66695 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66507 Number of HSP's gapped (non-prelim): 175 length of query: 465 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 443 effective length of database: 17,147,199,772 effective search space: 7596209498996 effective search space used: 7596209498996 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
