>RUVB_EHRRW (Q5HAK4) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 331

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +1

Query: 190 SKPCRKEKNNIKTNRMILQQISGASSCSFMLNVLTPLTMTREAPIEHFLCVLFPG 354
           S  C +++ NI     +L +  G SS    L +       R+ PI+H L    PG
Sbjct: 9   SSECIEDQQNISMRPNLLDEFIGQSSVVSNLKIFIDAAYERKEPIDHILLYGPPG 63

>RUVB_EHRRG (Q5FG39) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 331

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +1

Query: 190 SKPCRKEKNNIKTNRMILQQISGASSCSFMLNVLTPLTMTREAPIEHFLCVLFPG 354
           S  C +++ NI     +L +  G SS    L +       R+ PI+H L    PG
Sbjct: 9   SSECIEDQQNISMRPNLLDEFIGQSSVVSNLKIFIDAAYERKEPIDHILLYGPPG 63

>ZN294_MOUSE (Q6A009) Zinc finger protein 294 (Zfp-294)|
          Length = 1767

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = +1

Query: 277  MLNVLTPLTMTREAPIE----HFLCVLFPG*PTVD 369
            +LN LTPL + R  P++    H LC L P  P  D
Sbjct: 1383 LLNTLTPLLLFRARPVQIAAYHMLCKLMPELPQHD 1417

>RAD17_MOUSE (Q6NXW6) Cell cycle checkpoint protein RAD17|
          Length = 688

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 12/114 (10%)
 Frame = +1

Query: 139 SSYNNLKREILLHCWKASKPCRKEKNNIKTNRMILQQISGASSCSFMLNVLTPLTMTREA 318
           SS++  KR  L      SK  +K+K+N       +Q I G     F+   L  +   + A
Sbjct: 349 SSWSKKKRMSLKSDAAISKSKQKKKHNSTLENQEIQAIGGKDVSLFLFRALGKILYCKRA 408

Query: 319 PIEHFLCVLFPG------------*PTVDLPQKYYSGQWIKLFSQQLYLEHFTE 444
           P+        P              P   +   +  G +  L+  Q Y++ F E
Sbjct: 409 PLTELDSPRLPAHLSEHDRDTLLVQPEEIVEMSHMPGDFFNLYLHQNYIDFFAE 462

>EZRA_STRMU (Q8DTQ3) Septation ring formation regulator ezrA|
          Length = 574

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 11/33 (33%), Positives = 23/33 (69%)
 Frame = +3

Query: 96  NLAQNEKKKITQCLIILQQSEKRNSVTLLESIK 194
           NLA+ + K I + L +L++ E++NS  +L +++
Sbjct: 118 NLAEEDIKAIREALAVLKEQEEKNSARVLHALE 150

>SPTCA_DROME (P13395) Spectrin alpha chain|
          Length = 2415

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +3

Query: 171 VTLLESIKTLQERKEQHQNQ*NDFTTDQR 257
           V +LE+++ +QER+EQ  ++ NDF  + R
Sbjct: 9   VKILETVEDIQERREQVLSRYNDFKIETR 37


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,272,129
Number of Sequences: 219361
Number of extensions: 1093718
Number of successful extensions: 2578
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2578
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)