ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart06c12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase Length = 2748 Score = 204 bits (103), Expect = 2e-49 Identities = 208/243 (85%) Strand = Plus / Minus Query: 216 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275 ||||| ||||||||||||||||||| ||| | |||||||||| || ||||| ||||||| Sbjct: 2618 cctaggcgatgtagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgc 2559 Query: 276 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335 ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| || Sbjct: 2558 cgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcatcctcca 2499 Query: 336 gcttctgcctctcgccggacttgtgggtcaccgcagagcccttgaacccgggttgcttca 395 |||||| ||||||| ||||||||| || | || |||||||||||||| ||||||| | Sbjct: 2498 gcttcttcctctcggcggacttgtaggatatggcggagcccttgaacccatgttgcttga 2439 Query: 396 gcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtgatggccc 455 || ||| |||||||||| |||| ||||||| ||||||||| |||||||| ||||| Sbjct: 2438 gcgtcaggctcatccacccggagaagccctggctgcggaggttcccgacggtgacggccc 2379 Query: 456 tct 458 ||| Sbjct: 2378 tct 2376
>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3 gene) Length = 1152 Score = 204 bits (103), Expect = 2e-49 Identities = 208/243 (85%) Strand = Plus / Minus Query: 216 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275 ||||| ||||||||||||||||||| ||| | |||||||||| || ||||| ||||||| Sbjct: 1022 cctaggcgatgtagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgc 963 Query: 276 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335 ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| || Sbjct: 962 cgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcatcctcca 903 Query: 336 gcttctgcctctcgccggacttgtgggtcaccgcagagcccttgaacccgggttgcttca 395 |||||| ||||||| ||||||||| || | || |||||||||||||| ||||||| | Sbjct: 902 gcttcttcctctcggcggacttgtaggatatggcggagcccttgaacccatgttgcttga 843 Query: 396 gcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtgatggccc 455 || ||| |||||||||| |||| ||||||| ||||||||| |||||||| ||||| Sbjct: 842 gcgtcaggctcatccacccggagaagccctggctgcggaggttcccgacggtgacggccc 783 Query: 456 tct 458 ||| Sbjct: 782 tct 780
>gb|AY106317.1| Zea mays PCO101473 mRNA sequence Length = 827 Score = 186 bits (94), Expect = 4e-44 Identities = 130/142 (91%) Strand = Plus / Minus Query: 218 tagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccg 277 ||||| |||||||| | |||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 541 tagccaatgtagtagagggggtcaggcagcttgaaggtgcgcgcgccctccggcgcgccg 482 Query: 278 aggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagc 337 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 481 aggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctggagc 422 Query: 338 ttctgcctctcgccggacttgt 359 ||||| | |||||||||||||| Sbjct: 421 ttctggcgctcgccggacttgt 400 Score = 89.7 bits (45), Expect = 8e-15 Identities = 45/45 (100%) Strand = Plus / Minus Query: 421 cccctggcggcggaggttggtgacggtgatggccctctggtcctc 465 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 cccctggcggcggaggttggtgacggtgatggccctctggtcctc 294
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 216 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 89814 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 89873 Query: 276 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335 |||||||||||||||||||||| |||||||||||||||||| | ||||| |||| || Sbjct: 89874 cgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcca 89933 Query: 336 gcttctgcctctcgccggacttg 358 ||||||||| ||||||||||||| Sbjct: 89934 gcttctgccgctcgccggacttg 89956 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Plus Query: 224 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 283 |||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 80220 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 80279 Query: 284 tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 343 || ||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 80280 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 80339 Query: 344 ctctcgccggacttgt 359 | |||||||||||||| Sbjct: 80340 cgctcgccggacttgt 80355 Score = 157 bits (79), Expect = 4e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 216 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 90313 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 90372 Query: 276 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335 |||||||||||||||||||||| |||||||||||||| ||| | ||||| |||| || Sbjct: 90373 cgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcca 90432 Query: 336 gcttctgcctctcgccggacttg 358 ||||||||| ||||||||||||| Sbjct: 90433 gcttctgccgctcgccggacttg 90455 Score = 127 bits (64), Expect = 3e-26 Identities = 124/144 (86%) Strand = Plus / Plus Query: 216 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 104198 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 104257 Query: 276 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335 |||||||||| ||||| ||||| || |||||||||| |||| | ||||| |||| || Sbjct: 104258 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 104317 Query: 336 gcttctgcctctcgccggacttgt 359 |||| |||| |||||||||||||| Sbjct: 104318 gcttttgccgctcgccggacttgt 104341 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 5307 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5360 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 422 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465 ||||| ||||||||||| |||||||||||| ||| |||||||| Sbjct: 104419 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 104462 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 390 gcttcagcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtga 449 |||| ||||| || ||||||||||| ||| ||||| ||||| ||||| |||||||||| Sbjct: 90502 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 90561 Query: 450 tg 451 || Sbjct: 90562 tg 90563 Score = 44.1 bits (22), Expect = 0.40 Identities = 46/54 (85%) Strand = Plus / Plus Query: 409 ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 462 |||||| |||| ||||| ||| ||||||| ||||||||||||| ||| ||||| Sbjct: 80420 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 80473
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 216 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 5556605 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 5556664 Query: 276 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335 |||||||||||||||||||||| |||||||||||||||||| | ||||| |||| || Sbjct: 5556665 cgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcca 5556724 Query: 336 gcttctgcctctcgccggacttg 358 ||||||||| ||||||||||||| Sbjct: 5556725 gcttctgccgctcgccggacttg 5556747 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Plus Query: 224 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 283 |||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 5547011 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 5547070 Query: 284 tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 343 || ||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 5547071 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 5547130 Query: 344 ctctcgccggacttgt 359 | |||||||||||||| Sbjct: 5547131 cgctcgccggacttgt 5547146 Score = 157 bits (79), Expect = 4e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 216 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 5557104 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 5557163 Query: 276 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335 |||||||||||||||||||||| |||||||||||||| ||| | ||||| |||| || Sbjct: 5557164 cgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcca 5557223 Query: 336 gcttctgcctctcgccggacttg 358 ||||||||| ||||||||||||| Sbjct: 5557224 gcttctgccgctcgccggacttg 5557246 Score = 127 bits (64), Expect = 3e-26 Identities = 124/144 (86%) Strand = Plus / Plus Query: 216 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 5570989 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 5571048 Query: 276 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335 |||||||||| ||||| ||||| || |||||||||| |||| | ||||| |||| || Sbjct: 5571049 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 5571108 Query: 336 gcttctgcctctcgccggacttgt 359 |||| |||| |||||||||||||| Sbjct: 5571109 gcttttgccgctcgccggacttgt 5571132 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 245 agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 304 ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 5399395 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 5399454 Query: 305 ttaccgacgatgacata 321 |||||||| ||| |||| Sbjct: 5399455 ttaccgacaatggcata 5399471 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 5472098 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5472151 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 5416590 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 5416649 Query: 287 ctccactggtcgccgatgttaccgacgatga 317 ||||||||||||| ||||| |||||||||| Sbjct: 5416650 ttccactggtcgccaatgttgccgacgatga 5416680 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 277 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 327 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 5452349 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 5452399 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 306 ||||||||| | |||||||||| |||||||||||| |||||||| Sbjct: 5459713 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 5459756 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 422 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465 ||||| ||||||||||| |||||||||||| ||| |||||||| Sbjct: 5571210 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 5571253 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 390 gcttcagcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtga 449 |||| ||||| || ||||||||||| ||| ||||| ||||| ||||| |||||||||| Sbjct: 5557293 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 5557352 Query: 450 tg 451 || Sbjct: 5557353 tg 5557354 Score = 44.1 bits (22), Expect = 0.40 Identities = 46/54 (85%) Strand = Plus / Plus Query: 409 ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 462 |||||| |||| ||||| ||| ||||||| ||||||||||||| ||| ||||| Sbjct: 5547211 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 5547264 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 gtcgctccactggtcgccgatgttaccga 311 ||||||||||||||| |||||||| |||| Sbjct: 5428951 gtcgctccactggtcaccgatgttgccga 5428979
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 161 bits (81), Expect = 2e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 211 ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 270 |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 16055858 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 16055799 Query: 271 cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 330 || || | |||||| ||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 16055798 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 16055739 Query: 331 ctgcagcttctgcctctcgccggacttgt 359 |||||||||||| | |||||||||||||| Sbjct: 16055738 ctgcagcttctgacgctcgccggacttgt 16055710 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 422 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465 ||||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 16055632 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 16055589 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ttctgcctctcgccggactt 357 |||||||||||||||||||| Sbjct: 25973349 ttctgcctctcgccggactt 25973330 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ttctgcctctcgccggactt 357 |||||||||||||||||||| Sbjct: 25938072 ttctgcctctcgccggactt 25938091
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F09 Length = 166568 Score = 161 bits (81), Expect = 2e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 211 ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 270 |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 26191 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 26132 Query: 271 cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 330 || || | |||||| ||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 26131 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 26072 Query: 331 ctgcagcttctgcctctcgccggacttgt 359 |||||||||||| | |||||||||||||| Sbjct: 26071 ctgcagcttctgacgctcgccggacttgt 26043 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 422 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465 ||||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 25965 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 25922
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 161 bits (81), Expect = 2e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 211 ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 270 |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 137260 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 137201 Query: 271 cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 330 || || | |||||| ||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 137200 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 137141 Query: 331 ctgcagcttctgcctctcgccggacttgt 359 |||||||||||| | |||||||||||||| Sbjct: 137140 ctgcagcttctgacgctcgccggacttgt 137112 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 422 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465 ||||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 137034 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 136991
>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full insert sequence Length = 1076 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Minus Query: 224 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 283 |||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 903 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 844 Query: 284 tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 343 || ||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 843 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 784 Query: 344 ctctcgccggacttgt 359 | |||||||||||||| Sbjct: 783 cgctcgccggacttgt 768 Score = 44.1 bits (22), Expect = 0.40 Identities = 46/54 (85%) Strand = Plus / Minus Query: 409 ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 462 |||||| |||| ||||| ||| ||||||| ||||||||||||| ||| ||||| Sbjct: 703 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 650
>ref|XM_477966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 157 bits (79), Expect = 4e-35 Identities = 127/143 (88%) Strand = Plus / Minus Query: 217 ctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgcc 276 |||||||||||||||||||||||| ||||||||||||||||| || ||||| || || || Sbjct: 411 ctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtgcacc 352 Query: 277 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcag 336 | |||||| ||||||||||| ||||||||||||||||||| | |||||||||||||| Sbjct: 351 caagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcctgcag 292 Query: 337 cttctgcctctcgccggacttgt 359 |||||| | |||||||||||||| Sbjct: 291 cttctgacgctcgccggacttgt 269 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 422 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465 ||||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 191 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 148
>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full insert sequence Length = 1131 Score = 127 bits (64), Expect = 3e-26 Identities = 124/144 (86%) Strand = Plus / Minus Query: 216 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 275 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 885 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 826 Query: 276 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 335 |||||||||| ||||| ||||| || |||||||||| |||| | ||||| |||| || Sbjct: 825 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 766 Query: 336 gcttctgcctctcgccggacttgt 359 |||| |||| |||||||||||||| Sbjct: 765 gcttttgccgctcgccggacttgt 742 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 422 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 465 ||||| ||||||||||| |||||||||||| ||| |||||||| Sbjct: 664 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 621
>dbj|AK119190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H02, full insert sequence Length = 1112 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 323 ccggcgtcctgcagcttctgcc 344 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK106112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D12, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 323 ccggcgtcctgcagcttctgcc 344 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H04, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 323 ccggcgtcctgcagcttctgcc 344 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104267.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H12, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 323 ccggcgtcctgcagcttctgcc 344 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104252.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A07, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 323 ccggcgtcctgcagcttctgcc 344 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104180.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H06, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 323 ccggcgtcctgcagcttctgcc 344 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK061507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F05, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 323 ccggcgtcctgcagcttctgcc 344 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 32795 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 32854 Query: 323 ccggcgtcctgcagcttctgcc 344 ||||||||| |||||||||| Sbjct: 32855 ccggcgtccacaagcttctgcc 32876 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 277 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 327 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 6680 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 6730 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 306 ||||||||| | |||||||||| |||||||||||| |||||||| Sbjct: 14044 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 14087
>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0023G10, complete sequence Length = 36253 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 322 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 6415 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 6474 Query: 323 ccggcgtcctgcagcttctgcc 344 ||||||||| |||||||||| Sbjct: 6475 ccggcgtccacaagcttctgcc 6496 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 25538 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 25591
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 245 agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 304 ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 86069 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 86128 Query: 305 ttaccgacgatgacata 321 |||||||| ||| |||| Sbjct: 86129 ttaccgacaatggcata 86145 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 103264 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 103323 Query: 287 ctccactggtcgccgatgttaccgacgatga 317 ||||||||||||| ||||| |||||||||| Sbjct: 103324 ttccactggtcgccaatgttgccgacgatga 103354 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 277 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 327 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 139023 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 139073 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 263 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 306 ||||||||| | |||||||||| |||||||||||| |||||||| Sbjct: 146387 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 146430 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 gtcgctccactggtcgccgatgttaccga 311 ||||||||||||||| |||||||| |||| Sbjct: 115625 gtcgctccactggtcaccgatgttgccga 115653
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 245 agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 304 ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 84909 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 84968 Query: 305 ttaccgacgatgacata 321 |||||||| ||| |||| Sbjct: 84969 ttaccgacaatggcata 84985 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 102104 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 102163 Query: 287 ctccactggtcgccgatgttaccgacgatga 317 ||||||||||||| ||||| |||||||||| Sbjct: 102164 ttccactggtcgccaatgttgccgacgatga 102194
>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full insert sequence Length = 1168 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full insert sequence Length = 1081 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full insert sequence Length = 1081 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full insert sequence Length = 1081 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full insert sequence Length = 1096 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 275 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 328 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104624.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A08, full insert sequence Length = 1051 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 794 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 735 Query: 287 ctccactggtcgccgatgttaccgacgatga 317 ||||||||||||| ||||| |||||||||| Sbjct: 734 ttccactggtcgccaatgttgccgacgatga 704
>dbj|AK104203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C10, full insert sequence Length = 1053 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 796 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 737 Query: 287 ctccactggtcgccgatgttaccgacgatga 317 ||||||||||||| ||||| |||||||||| Sbjct: 736 ttccactggtcgccaatgttgccgacgatga 706
>dbj|AK067327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099D13, full insert sequence Length = 1059 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 802 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 743 Query: 287 ctccactggtcgccgatgttaccgacgatga 317 ||||||||||||| ||||| |||||||||| Sbjct: 742 ttccactggtcgccaatgttgccgacgatga 712
>dbj|AK060874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A01, full insert sequence Length = 1074 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 227 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 286 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 795 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 736 Query: 287 ctccactggtcgccgatgttaccgacgatga 317 ||||||||||||| ||||| |||||||||| Sbjct: 735 ttccactggtcgccaatgttgccgacgatga 705
>ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 821 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 762 Query: 296 tcgccgatgttaccga 311 ||||||||||| |||| Sbjct: 761 tcgccgatgttgccga 746
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 4871431 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 4871490 Query: 296 tcgccgatgttaccga 311 ||||||||||| |||| Sbjct: 4871491 tcgccgatgttgccga 4871506
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 116080 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 116139 Query: 296 tcgccgatgttaccga 311 ||||||||||| |||| Sbjct: 116140 tcgccgatgttgccga 116155
>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full insert sequence Length = 1095 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 296 tcgccgatgttaccga 311 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full insert sequence Length = 1094 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 843 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 784 Query: 296 tcgccgatgttaccga 311 ||||||||||| |||| Sbjct: 783 tcgccgatgttgccga 768
>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full insert sequence Length = 1095 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 296 tcgccgatgttaccga 311 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full insert sequence Length = 1308 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 1057 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 998 Query: 296 tcgccgatgttaccga 311 ||||||||||| |||| Sbjct: 997 tcgccgatgttgccga 982
>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full insert sequence Length = 1095 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 296 tcgccgatgttaccga 311 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full insert sequence Length = 1114 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 236 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 295 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 296 tcgccgatgttaccga 311 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full insert sequence Length = 1100 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 277 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 327 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 760 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 710
>ref|XM_366443.1| Magnaporthe grisea 70-15 hypothetical protein (MG10661.4) partial mRNA Length = 840 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 274 gccgaggatgtcgctccactggtcgccgatgtt 306 ||||| || ||||||||||||| |||||||||| Sbjct: 696 gccgaagaagtcgctccactgggcgccgatgtt 664
>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence Length = 249251 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 gacggtgatggccctctggtc 462 ||||||||||||||||||||| Sbjct: 208833 gacggtgatggccctctggtc 208813
>ref|NM_193052.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1491 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ttctgcctctcgccggactt 357 |||||||||||||||||||| Sbjct: 739 ttctgcctctcgccggactt 758
>ref|NM_193043.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ttctgcctctcgccggactt 357 |||||||||||||||||||| Sbjct: 1204 ttctgcctctcgccggactt 1223
>gb|AC118201.8| Mus musculus chromosome 7, clone RP23-339M11, complete sequence Length = 194241 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 caagctctcaacaatggaaa 104 |||||||||||||||||||| Sbjct: 189390 caagctctcaacaatggaaa 189371
>ref|XM_425961.1| PREDICTED: Gallus gallus similar to multiple myeloma transforming gene 2 (LOC428400), mRNA Length = 828 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 cctggcggcggaggttggtgacgg 446 ||||||||||||||| |||||||| Sbjct: 109 cctggcggcggaggtgggtgacgg 86
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 tcctgcagcttctgcctctc 348 |||||||||||||||||||| Sbjct: 108648 tcctgcagcttctgcctctc 108629
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gtcgctccactggtcgccga 302 |||||||||||||||||||| Sbjct: 12244752 gtcgctccactggtcgccga 12244771
>gb|AC158213.4| Mus musculus chromosome 7, clone RP24-253H20, complete sequence Length = 175873 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 caagctctcaacaatggaaa 104 |||||||||||||||||||| Sbjct: 27587 caagctctcaacaatggaaa 27568
>gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174576 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 agctctcaacaatggaaatg 106 |||||||||||||||||||| Sbjct: 45528 agctctcaacaatggaaatg 45547
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 239 tcgggcagcttgaaggtgcgggcaccct 266 |||||||||||||||| |||||| |||| Sbjct: 1551158 tcgggcagcttgaaggcgcgggcgccct 1551185
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 aggttggtgacggtgatggc 453 |||||||||||||||||||| Sbjct: 1566505 aggttggtgacggtgatggc 1566486
>emb|BX950605.2| Gallus gallus finished cDNA, clone ChEST529k5 Length = 536 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 cctggcggcggaggttggtgacgg 446 ||||||||||||||| |||||||| Sbjct: 195 cctggcggcggaggtgggtgacgg 172
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 taattcatagtagcaattaa 81 |||||||||||||||||||| Sbjct: 22025728 taattcatagtagcaattaa 22025709
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gtcgctccactggtcgccga 302 |||||||||||||||||||| Sbjct: 12241515 gtcgctccactggtcgccga 12241534
>emb|BX815131.1|CNS0ACYU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS36ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1831 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 atccgttgattaagcagcatgcaa 43 |||||||||||||||||| ||||| Sbjct: 1589 atccgttgattaagcagcctgcaa 1566
>emb|BX934717.1| Gallus gallus finished cDNA, clone ChEST114j14 Length = 532 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 cctggcggcggaggttggtgacgg 446 ||||||||||||||| |||||||| Sbjct: 191 cctggcggcggaggtgggtgacgg 168
>gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds Length = 2310 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gtcgctccactggtcgccga 302 |||||||||||||||||||| Sbjct: 94 gtcgctccactggtcgccga 75
>ref|XM_231590.3| PREDICTED: Rattus norvegicus plexin A4 (predicted) (Plxna4_predicted), mRNA Length = 7451 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 cggccgagccagaggcggcc 217 |||||||||||||||||||| Sbjct: 42 cggccgagccagaggcggcc 61
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gtcgctccactggtcgccga 302 |||||||||||||||||||| Sbjct: 14285 gtcgctccactggtcgccga 14304
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ttctgcctctcgccggactt 357 |||||||||||||||||||| Sbjct: 50361 ttctgcctctcgccggactt 50342 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ttctgcctctcgccggactt 357 |||||||||||||||||||| Sbjct: 15084 ttctgcctctcgccggactt 15103
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ttctgcctctcgccggactt 357 |||||||||||||||||||| Sbjct: 6911 ttctgcctctcgccggactt 6892
>emb|CR545466.9| Zebrafish DNA sequence from clone DKEYP-115A10 in linkage group 20, complete sequence Length = 84525 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 attaagcagcatgcaacatc 47 |||||||||||||||||||| Sbjct: 6109 attaagcagcatgcaacatc 6090
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ttctgcctctcgccggactt 357 |||||||||||||||||||| Sbjct: 108520 ttctgcctctcgccggactt 108539
>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence Length = 124367 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 324 cggcgtcctgcagcttctgcctct 347 ||||||||||||||| |||||||| Sbjct: 10487 cggcgtcctgcagctgctgcctct 10464
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 taattcatagtagcaattaa 81 |||||||||||||||||||| Sbjct: 21954073 taattcatagtagcaattaa 21954054
>emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa0062E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138308 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 taattcatagtagcaattaa 81 |||||||||||||||||||| Sbjct: 131856 taattcatagtagcaattaa 131837 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,342,497 Number of Sequences: 3902068 Number of extensions: 3342497 Number of successful extensions: 60009 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59578 Number of HSP's gapped (non-prelim): 419 length of query: 466 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 444 effective length of database: 17,147,199,772 effective search space: 7613356698768 effective search space used: 7613356698768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
